RNA–Protein interactions for RNA: ENST00000378300.9

TPM2-204, Transcript of tropomyosin 2, humanhuman

TSL 3 BASIC

Gene TPM2, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-204ENST00000378300 ZNF34Q8IZ26 560 aa17.63■□□□□ 0.41
TPM2-204ENST00000378300 NARFQ9UHQ1 456 aa17.63■□□□□ 0.41
TPM2-204ENST00000378300 SCN7AQ01118 1682 aa17.63■□□□□ 0.41
TPM2-204ENST00000378300 PNMA6EA0A0J9YXQ4 647 aa17.63■□□□□ 0.41
TPM2-204ENST00000378300 H7C1W4 665 aa17.63■□□□□ 0.41
TPM2-204ENST00000378300 HSP90AB3PQ58FF7 597 aa17.63■□□□□ 0.41
TPM2-204ENST00000378300 CENPQQ7L2Z9 268 aaPredicted RBP17.63■□□□□ 0.41
TPM2-204ENST00000378300 SKAP1Q86WV1 359 aa17.63■□□□□ 0.41
TPM2-204ENST00000378300 RPAP2Q8IXW5 612 aaPredicted RBP17.63■□□□□ 0.41
TPM2-204ENST00000378300 AKT1S1Q96B36 256 aa17.63■□□□□ 0.41
TPM2-204ENST00000378300 MSH5O43196 834 aa17.62■□□□□ 0.41
TPM2-204ENST00000378300 EPHA10Q5JZY3 1008 aa17.62■□□□□ 0.41
TPM2-204ENST00000378300 SYNE4Q8N205 404 aa17.62■□□□□ 0.41
TPM2-204ENST00000378300 RFC4P35249 363 aa17.61■□□□□ 0.41
TPM2-204ENST00000378300 SF3B2Q13435 895 aaKnown RBP17.61■□□□□ 0.41
TPM2-204ENST00000378300 FAM89AQ96GI7 184 aa17.61■□□□□ 0.41
TPM2-204ENST00000378300 BICC1Q9H694 974 aaKnown RBP17.61■□□□□ 0.41
TPM2-204ENST00000378300 ZPR1O75312 459 aa17.61■□□□□ 0.41
TPM2-204ENST00000378300 ATP8B2P98198 1209 aa17.61■□□□□ 0.41
TPM2-204ENST00000378300 TFCP2L1Q9NZI6 479 aa17.61■□□□□ 0.41
TPM2-204ENST00000378300 NIP7Q9Y221 180 aaKnown RBP eCLIP17.61■□□□□ 0.41
TPM2-204ENST00000378300 USP42Q9H9J4 1324 aaKnown RBP17.61■□□□□ 0.41
TPM2-204ENST00000378300 FAM177BA6PVY3 158 aa17.6■□□□□ 0.41
TPM2-204ENST00000378300 SSFA2P28290 1259 aa17.6■□□□□ 0.41
TPM2-204ENST00000378300 SUSD4Q5VX71 490 aa17.6■□□□□ 0.41
TPM2-204ENST00000378300 TBC1D9BQ66K14 1250 aa17.6■□□□□ 0.41
TPM2-204ENST00000378300 CLEC4GQ6UXB4 293 aa17.6■□□□□ 0.41
TPM2-204ENST00000378300 PPP1R42Q7Z4L9 355 aa17.6■□□□□ 0.41
TPM2-204ENST00000378300 ZNF652Q9Y2D9 606 aa17.6■□□□□ 0.41
TPM2-204ENST00000378300 TUBGCP6Q96RT7 1819 aa17.59■□□□□ 0.41
TPM2-204ENST00000378300 BAG6P46379 1132 aa17.59■□□□□ 0.41
TPM2-204ENST00000378300 BICDL1Q6ZP65 573 aa17.59■□□□□ 0.41
TPM2-204ENST00000378300 ANO8Q9HCE9 1232 aaPredicted RBP17.59■□□□□ 0.41
TPM2-204ENST00000378300 PCCAP05165 728 aaPredicted RBP17.58■□□□□ 0.41
TPM2-204ENST00000378300 ADRA2BP18089 450 aa17.58■□□□□ 0.41
TPM2-204ENST00000378300 ZBTB38Q8NAP3 1195 aaPredicted RBP17.58■□□□□ 0.41
TPM2-204ENST00000378300 TRMT112Q9UI30 125 aaKnown RBP17.58■□□□□ 0.41
TPM2-204ENST00000378300 SRGAP3O43295 1099 aa17.57■□□□□ 0.4
TPM2-204ENST00000378300 FOXO4P98177 505 aa17.57■□□□□ 0.4
TPM2-204ENST00000378300 SMC5Q8IY18 1101 aa17.57■□□□□ 0.4
TPM2-204ENST00000378300 MTX1Q13505 466 aa17.56■□□□□ 0.4
TPM2-204ENST00000378300 POLA2Q14181 598 aa17.56■□□□□ 0.4
TPM2-204ENST00000378300 COL23A1Q86Y22 540 aaPredicted RBP17.56■□□□□ 0.4
TPM2-204ENST00000378300 SSH3Q8TE77 659 aa17.56■□□□□ 0.4
TPM2-204ENST00000378300 GYS1P13807 737 aa17.56■□□□□ 0.4
TPM2-204ENST00000378300 PARP10Q53GL7 1025 aa17.56■□□□□ 0.4
TPM2-204ENST00000378300 ERICH6Q7L0X2 663 aa17.56■□□□□ 0.4
TPM2-204ENST00000378300 DCTPP1Q9H773 170 aa17.56■□□□□ 0.4
TPM2-204ENST00000378300 HDAC5Q9UQL6 1122 aa17.56■□□□□ 0.4
TPM2-204ENST00000378300 PNPLA7Q6ZV29 1317 aa17.55■□□□□ 0.4
TPM2-204ENST00000378300 RGL2O15211 777 aa17.55■□□□□ 0.4
TPM2-204ENST00000378300 HMMRO75330 724 aa17.55■□□□□ 0.4
TPM2-204ENST00000378300 NTSR2O95665 410 aa17.55■□□□□ 0.4
TPM2-204ENST00000378300 HMGB2P26583 209 aaKnown RBP17.55■□□□□ 0.4
TPM2-204ENST00000378300 RABL6Q3YEC7 729 aaPredicted RBP17.55■□□□□ 0.4
TPM2-204ENST00000378300 NUTM1Q86Y26 1132 aa17.55■□□□□ 0.4
TPM2-204ENST00000378300 UTP14AQ9BVJ6 771 aaKnown RBP17.55■□□□□ 0.4
TPM2-204ENST00000378300 LMBR1LQ6UX01 489 aa17.54■□□□□ 0.4
TPM2-204ENST00000378300 PDZRN3Q9UPQ7 1066 aa17.54■□□□□ 0.4
TPM2-204ENST00000378300 SLC15A2Q16348 729 aa17.53■□□□□ 0.4
TPM2-204ENST00000378300 CCDC125Q86Z20 511 aa17.53■□□□□ 0.4
TPM2-204ENST00000378300 EXOC6BQ9Y2D4 811 aa17.53■□□□□ 0.4
TPM2-204ENST00000378300 SH3TC1Q8TE82 1336 aa17.53■□□□□ 0.4
TPM2-204ENST00000378300 CDHR2Q9BYE9 1310 aa17.53■□□□□ 0.4
TPM2-204ENST00000378300 APBB1O00213 710 aa17.53■□□□□ 0.4
TPM2-204ENST00000378300 IRS4O14654 1257 aaPredicted RBP17.53■□□□□ 0.4
TPM2-204ENST00000378300 NFIXQ14938 502 aa17.53■□□□□ 0.4
TPM2-204ENST00000378300 KLHDC4Q8TBB5 520 aa17.53■□□□□ 0.4
TPM2-204ENST00000378300 GCC1Q96CN9 775 aa17.53■□□□□ 0.4
TPM2-204ENST00000378300 SETDB2Q96T68 719 aa17.53■□□□□ 0.4
TPM2-204ENST00000378300 PA2G4Q9UQ80 394 aaKnown RBP17.53■□□□□ 0.4
TPM2-204ENST00000378300 HCLS1P14317 486 aaPredicted RBP17.52■□□□□ 0.4
TPM2-204ENST00000378300 CCDC85AQ96PX6 553 aaPredicted RBP17.52■□□□□ 0.4
TPM2-204ENST00000378300 COL24A1Q17RW2 1714 aa17.52■□□□□ 0.39
TPM2-204ENST00000378300 PLA2G12BQ9BX93 195 aa17.51■□□□□ 0.39
TPM2-204ENST00000378300 STK32BQ9NY57 414 aa17.51■□□□□ 0.39
TPM2-204ENST00000378300 CHMP3Q9Y3E7 222 aa17.51■□□□□ 0.39
TPM2-204ENST00000378300 NUCB1Q02818 461 aa17.51■□□□□ 0.39
TPM2-204ENST00000378300 ERFEQ4G0M1 354 aa17.51■□□□□ 0.39
TPM2-204ENST00000378300 ANKRD45Q5TZF3 282 aa17.51■□□□□ 0.39
TPM2-204ENST00000378300 CCDC24Q8N4L8 307 aa17.51■□□□□ 0.39
TPM2-204ENST00000378300 UPF1Q92900 1129 aaKnown RBP eCLIP17.51■□□□□ 0.39
TPM2-204ENST00000378300 SURF6O75683 361 aaKnown RBP17.5■□□□□ 0.39
TPM2-204ENST00000378300 RFX5P48382 616 aaPredicted RBP17.5■□□□□ 0.39
TPM2-204ENST00000378300 BCL11AQ9H165 835 aa17.5■□□□□ 0.39
TPM2-204ENST00000378300 DDX60Q8IY21 1712 aaKnown RBP17.49■□□□□ 0.39
TPM2-204ENST00000378300 SMARCA5O60264 1052 aaPredicted RBP17.49■□□□□ 0.39
TPM2-204ENST00000378300 PDE8AO60658 829 aa17.49■□□□□ 0.39
TPM2-204ENST00000378300 NBPF5PQ86XG9 351 aaPredicted RBP17.49■□□□□ 0.39
TPM2-204ENST00000378300 LNPKQ9C0E8 428 aa17.49■□□□□ 0.39
TPM2-204ENST00000378300 ABCC12Q96J65 1359 aa17.48■□□□□ 0.39
TPM2-204ENST00000378300 CSF1RP07333 972 aa17.48■□□□□ 0.39
TPM2-204ENST00000378300 TM4SF1P30408 202 aa17.48■□□□□ 0.39
TPM2-204ENST00000378300 CTSWP56202 376 aa17.48■□□□□ 0.39
TPM2-204ENST00000378300 FAM161AQ3B820 660 aa17.48■□□□□ 0.39
TPM2-204ENST00000378300 CHD1LQ86WJ1 897 aa17.48■□□□□ 0.39
TPM2-204ENST00000378300 FLAD1Q8NFF5 587 aa17.48■□□□□ 0.39
TPM2-204ENST00000378300 TTLL11Q8NHH1 800 aa17.48■□□□□ 0.39
TPM2-204ENST00000378300 PDGFDQ9GZP0 370 aaPredicted RBP17.48■□□□□ 0.39
TPM2-204ENST00000378300 CARMIL3Q8ND23 1372 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 451 ms