RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 CLUAP1Q96AJ1 413 aa14.9□□□□□ -0.02
DEPDC4-202ENST00000378244 CD2APQ9Y5K6 639 aa14.9□□□□□ -0.02
DEPDC4-202ENST00000378244 LRP5O75197 1615 aa14.9□□□□□ -0.02
DEPDC4-202ENST00000378244 PELP1Q8IZL8 1130 aaKnown RBP14.89□□□□□ -0.03
DEPDC4-202ENST00000378244 NYXQ9GZU5 481 aa14.89□□□□□ -0.03
DEPDC4-202ENST00000378244 HCLS1P14317 486 aaPredicted RBP14.89□□□□□ -0.03
DEPDC4-202ENST00000378244 CWC25Q9NXE8 425 aaPredicted RBP14.89□□□□□ -0.03
DEPDC4-202ENST00000378244 RCAN3Q9UKA8 241 aa14.89□□□□□ -0.03
DEPDC4-202ENST00000378244 TNNQ9UQP3 1299 aa14.89□□□□□ -0.03
DEPDC4-202ENST00000378244 PTPRCP08575 1304 aa14.89□□□□□ -0.03
DEPDC4-202ENST00000378244 NEURL1BA8MQ27 555 aa14.88□□□□□ -0.03
DEPDC4-202ENST00000378244 DPEP1P16444 411 aa14.88□□□□□ -0.03
DEPDC4-202ENST00000378244 KIF16BQ96L93 1317 aa14.88□□□□□ -0.03
DEPDC4-202ENST00000378244 ABCC12Q96J65 1359 aa14.88□□□□□ -0.03
DEPDC4-202ENST00000378244 ARFGEF2Q9Y6D5 1785 aa14.88□□□□□ -0.03
DEPDC4-202ENST00000378244 BEND3Q5T5X7 828 aa14.88□□□□□ -0.03
DEPDC4-202ENST00000378244 CCDC191Q8NCU4 936 aa14.88□□□□□ -0.03
DEPDC4-202ENST00000378244 LINS1Q8NG48 757 aa14.88□□□□□ -0.03
DEPDC4-202ENST00000378244 SH3TC1Q8TE82 1336 aa14.88□□□□□ -0.03
DEPDC4-202ENST00000378244 COL24A1Q17RW2 1714 aa14.88□□□□□ -0.03
DEPDC4-202ENST00000378244 TRIM28Q13263 835 aaKnown RBP14.87□□□□□ -0.03
DEPDC4-202ENST00000378244 BRIP1Q9BX63 1249 aa14.87□□□□□ -0.03
DEPDC4-202ENST00000378244 C10orf71Q711Q0 1435 aa14.87□□□□□ -0.03
DEPDC4-202ENST00000378244 AFDNP55196 1824 aaKnown RBP14.87□□□□□ -0.03
DEPDC4-202ENST00000378244 TRIM27P14373 513 aa14.86□□□□□ -0.03
DEPDC4-202ENST00000378244 C3orf67Q6ZVT6 689 aa14.86□□□□□ -0.03
DEPDC4-202ENST00000378244 UBE3BQ7Z3V4 1068 aa14.86□□□□□ -0.03
DEPDC4-202ENST00000378244 C2CD5Q86YS7 1000 aa14.86□□□□□ -0.03
DEPDC4-202ENST00000378244 SRCIN1Q9C0H9 1055 aa14.86□□□□□ -0.03
DEPDC4-202ENST00000378244 PLIN1O60240 522 aa14.86□□□□□ -0.03
DEPDC4-202ENST00000378244 PDE6BP35913 854 aa14.86□□□□□ -0.03
DEPDC4-202ENST00000378244 BRPF1P55201 1214 aaPredicted RBP14.86□□□□□ -0.03
DEPDC4-202ENST00000378244 GCKRQ14397 625 aa14.86□□□□□ -0.03
DEPDC4-202ENST00000378244 ZNF622Q969S3 477 aaKnown RBP eCLIP14.86□□□□□ -0.03
DEPDC4-202ENST00000378244 H0YIN7 160 aa14.85□□□□□ -0.03
DEPDC4-202ENST00000378244 IPO8O15397 1037 aaKnown RBP14.85□□□□□ -0.03
DEPDC4-202ENST00000378244 TGFB2P61812 414 aa14.85□□□□□ -0.03
DEPDC4-202ENST00000378244 ZBTB38Q8NAP3 1195 aaPredicted RBP14.85□□□□□ -0.03
DEPDC4-202ENST00000378244 CACNA1FO60840 1977 aa14.85□□□□□ -0.03
DEPDC4-202ENST00000378244 IRS4O14654 1257 aaPredicted RBP14.84□□□□□ -0.03
DEPDC4-202ENST00000378244 ZKSCAN2Q63HK3 967 aa14.84□□□□□ -0.03
DEPDC4-202ENST00000378244 ATF7IPQ6VMQ6 1270 aa14.84□□□□□ -0.03
DEPDC4-202ENST00000378244 CCDC85AQ96PX6 553 aaPredicted RBP14.84□□□□□ -0.03
DEPDC4-202ENST00000378244 API5Q9BZZ5 524 aaKnown RBP14.84□□□□□ -0.03
DEPDC4-202ENST00000378244 NLRP3Q96P20 1036 aa14.84□□□□□ -0.03
DEPDC4-202ENST00000378244 C9orf78Q9NZ63 289 aaPredicted RBP14.84□□□□□ -0.03
DEPDC4-202ENST00000378244 PXDNLA1KZ92 1463 aa14.84□□□□□ -0.03
DEPDC4-202ENST00000378244 KCNA3P22001 575 aa14.83□□□□□ -0.03
DEPDC4-202ENST00000378244 ZNF219Q9P2Y4 722 aaPredicted RBP14.83□□□□□ -0.03
DEPDC4-202ENST00000378244 BCS1LQ9Y276 419 aa14.83□□□□□ -0.03
DEPDC4-202ENST00000378244 PCCAP05165 728 aaPredicted RBP14.83□□□□□ -0.04
DEPDC4-202ENST00000378244 SRGNP10124 158 aa14.82□□□□□ -0.04
DEPDC4-202ENST00000378244 GPR162Q16538 588 aa14.82□□□□□ -0.04
DEPDC4-202ENST00000378244 ANKRD36CQ5JPF3 1778 aa14.82□□□□□ -0.04
DEPDC4-202ENST00000378244 ARHGAP45Q92619 1136 aa14.82□□□□□ -0.04
DEPDC4-202ENST00000378244 NRXN2Q9P2S2 1712 aa14.82□□□□□ -0.04
DEPDC4-202ENST00000378244 NBPF7P0C2Y1 421 aaPredicted RBP14.82□□□□□ -0.04
DEPDC4-202ENST00000378244 FTSJ3Q8IY81 847 aaKnown RBP14.82□□□□□ -0.04
DEPDC4-202ENST00000378244 PIM2Q9P1W9 311 aa14.82□□□□□ -0.04
DEPDC4-202ENST00000378244 IBTKQ9P2D0 1353 aaPredicted RBP14.81□□□□□ -0.04
DEPDC4-202ENST00000378244 GRM8O00222 908 aa14.81□□□□□ -0.04
DEPDC4-202ENST00000378244 SLC10A5Q5PT55 438 aa14.81□□□□□ -0.04
DEPDC4-202ENST00000378244 RPGRQ92834 1020 aaKnown RBP14.81□□□□□ -0.04
DEPDC4-202ENST00000378244 H7C1W4 665 aa14.81□□□□□ -0.04
DEPDC4-202ENST00000378244 ALDH1L1O75891 902 aa14.81□□□□□ -0.04
DEPDC4-202ENST00000378244 N4BP2Q86UW6 1770 aaPredicted RBP14.8□□□□□ -0.04
DEPDC4-202ENST00000378244 RNF123Q5XPI4 1314 aa14.8□□□□□ -0.04
DEPDC4-202ENST00000378244 RLBP1P12271 317 aa14.8□□□□□ -0.04
DEPDC4-202ENST00000378244 PANK1Q8TE04 598 aa14.8□□□□□ -0.04
DEPDC4-202ENST00000378244 YBX3P16989 372 aaKnown RBP eCLIP14.8□□□□□ -0.04
DEPDC4-202ENST00000378244 CCT4P50991 539 aaKnown RBP14.8□□□□□ -0.04
DEPDC4-202ENST00000378244 TMEM57Q8N5G2 664 aa14.8□□□□□ -0.04
DEPDC4-202ENST00000378244 MASTLQ96GX5 879 aa14.8□□□□□ -0.04
DEPDC4-202ENST00000378244 KLRG2A4D1S0 409 aaPredicted RBP14.79□□□□□ -0.04
DEPDC4-202ENST00000378244 CRY2Q49AN0 593 aa14.79□□□□□ -0.04
DEPDC4-202ENST00000378244 DALRD3Q5D0E6 543 aaKnown RBP14.79□□□□□ -0.04
DEPDC4-202ENST00000378244 DZIP1LQ8IYY4 767 aaKnown RBP14.79□□□□□ -0.04
DEPDC4-202ENST00000378244 TTLL6Q8N841 843 aa14.79□□□□□ -0.04
DEPDC4-202ENST00000378244 USP44Q9H0E7 712 aa14.79□□□□□ -0.04
DEPDC4-202ENST00000378244 ANKRD31Q8N7Z5 1873 aa14.79□□□□□ -0.04
DEPDC4-202ENST00000378244 ABCC4O15439 1325 aa14.79□□□□□ -0.04
DEPDC4-202ENST00000378244 NPR1P16066 1061 aa14.78□□□□□ -0.04
DEPDC4-202ENST00000378244 TNRC6CQ9HCJ0 1690 aaKnown RBP14.78□□□□□ -0.04
DEPDC4-202ENST00000378244 PDE8AO60658 829 aa14.78□□□□□ -0.04
DEPDC4-202ENST00000378244 CASP7P55210 303 aa14.78□□□□□ -0.04
DEPDC4-202ENST00000378244 SLC51AQ86UW1 340 aa14.78□□□□□ -0.04
DEPDC4-202ENST00000378244 ITPRIPQ8IWB1 547 aa14.78□□□□□ -0.04
DEPDC4-202ENST00000378244 CHMP3Q9Y3E7 222 aa14.78□□□□□ -0.04
DEPDC4-202ENST00000378244 PRPF40BQ6NWY9 871 aaKnown RBP14.77□□□□□ -0.04
DEPDC4-202ENST00000378244 OLFM4Q6UX06 510 aa14.77□□□□□ -0.04
DEPDC4-202ENST00000378244 MEIS3Q99687 375 aa14.77□□□□□ -0.04
DEPDC4-202ENST00000378244 SEC31BQ9NQW1 1179 aa14.77□□□□□ -0.04
DEPDC4-202ENST00000378244 C21orf2O43822 256 aa14.77□□□□□ -0.05
DEPDC4-202ENST00000378244 EPHA10Q5JZY3 1008 aa14.77□□□□□ -0.05
DEPDC4-202ENST00000378244 C20orf194Q5TEA3 1177 aa14.77□□□□□ -0.05
DEPDC4-202ENST00000378244 INTS3Q68E01 1043 aaKnown RBP14.77□□□□□ -0.05
DEPDC4-202ENST00000378244 DDX46Q7L014 1031 aaKnown RBP14.77□□□□□ -0.05
DEPDC4-202ENST00000378244 KIF13BQ9NQT8 1826 aa14.77□□□□□ -0.05
DEPDC4-202ENST00000378244 CDHR2Q9BYE9 1310 aa14.76□□□□□ -0.05
DEPDC4-202ENST00000378244 CTSWP56202 376 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms