RNA–Protein interactions for RNA: ENST00000378197.4

RPP38-201, Transcript of ribonuclease P/MRP subunit p38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPP38, Length 1,457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38-201ENST00000378197 SLFN5Q08AF3 891 aa29.61■■■□□ 2.33
RPP38-201ENST00000378197 KLRG2A4D1S0 409 aaPredicted RBP29.6■■■□□ 2.33
RPP38-201ENST00000378197 G2E3Q7L622 706 aa29.6■■■□□ 2.33
RPP38-201ENST00000378197 CDCA7LQ96GN5 454 aa29.6■■■□□ 2.33
RPP38-201ENST00000378197 ISCA1Q9BUE6 129 aa29.6■■■□□ 2.33
RPP38-201ENST00000378197 ATP5J2-PTCD1G3V325 749 aa29.59■■■□□ 2.33
RPP38-201ENST00000378197 MASTLQ96GX5 879 aa29.59■■■□□ 2.33
RPP38-201ENST00000378197 RIC1Q4ADV7 1423 aa29.58■■■□□ 2.33
RPP38-201ENST00000378197 STYK1Q6J9G0 422 aa29.58■■■□□ 2.33
RPP38-201ENST00000378197 ARHGAP27Q6ZUM4 889 aa29.57■■■□□ 2.32
RPP38-201ENST00000378197 ZNF428Q96B54 188 aa29.57■■■□□ 2.32
RPP38-201ENST00000378197 RNF123Q5XPI4 1314 aa29.57■■■□□ 2.32
RPP38-201ENST00000378197 TRMT112Q9UI30 125 aaKnown RBP29.56■■■□□ 2.32
RPP38-201ENST00000378197 NPR1P16066 1061 aa29.55■■■□□ 2.32
RPP38-201ENST00000378197 KSR2Q6VAB6 950 aa29.55■■■□□ 2.32
RPP38-201ENST00000378197 CNKSR1Q969H4 720 aa29.55■■■□□ 2.32
RPP38-201ENST00000378197 MYD88Q99836 296 aa29.55■■■□□ 2.32
RPP38-201ENST00000378197 MAP3K2Q9Y2U5 619 aa29.55■■■□□ 2.32
RPP38-201ENST00000378197 CACNA1FO60840 1977 aa29.55■■■□□ 2.32
RPP38-201ENST00000378197 PI4KAP2A4QPH2 592 aa29.55■■■□□ 2.32
RPP38-201ENST00000378197 FLIIQ13045 1269 aa29.55■■■□□ 2.32
RPP38-201ENST00000378197 TRIM28Q13263 835 aaKnown RBP29.55■■■□□ 2.32
RPP38-201ENST00000378197 PI4KAP1Q8N8J0 262 aa29.55■■■□□ 2.32
RPP38-201ENST00000378197 ADCY9O60503 1353 aa29.54■■■□□ 2.32
RPP38-201ENST00000378197 SLC10A5Q5PT55 438 aa29.54■■■□□ 2.32
RPP38-201ENST00000378197 SH3TC1Q8TE82 1336 aa29.54■■■□□ 2.32
RPP38-201ENST00000378197 METTL22Q9BUU2 404 aaPredicted RBP29.54■■■□□ 2.32
RPP38-201ENST00000378197 CACNA1SQ13698 1873 aa29.53■■■□□ 2.32
RPP38-201ENST00000378197 CRY2Q49AN0 593 aa29.53■■■□□ 2.32
RPP38-201ENST00000378197 SYNE4Q8N205 404 aa29.53■■■□□ 2.32
RPP38-201ENST00000378197 PRPF40BQ6NWY9 871 aaKnown RBP29.52■■■□□ 2.32
RPP38-201ENST00000378197 TRMT2AQ8IZ69 625 aaKnown RBP29.52■■■□□ 2.32
RPP38-201ENST00000378197 C3orf67Q6ZVT6 689 aa29.51■■■□□ 2.31
RPP38-201ENST00000378197 SLX4Q8IY92 1834 aa29.51■■■□□ 2.31
RPP38-201ENST00000378197 HNRNPUQ00839 825 aaKnown RBP eCLIP29.5■■■□□ 2.31
RPP38-201ENST00000378197 FKBP5Q13451 457 aaPredicted RBP29.5■■■□□ 2.31
RPP38-201ENST00000378197 NLRP3Q96P20 1036 aa29.5■■■□□ 2.31
RPP38-201ENST00000378197 ZNF219Q9P2Y4 722 aaPredicted RBP29.5■■■□□ 2.31
RPP38-201ENST00000378197 HCLS1P14317 486 aaPredicted RBP29.49■■■□□ 2.31
RPP38-201ENST00000378197 C21orf2O43822 256 aa29.48■■■□□ 2.31
RPP38-201ENST00000378197 RPGRQ92834 1020 aaKnown RBP29.48■■■□□ 2.31
RPP38-201ENST00000378197 FAM89AQ96GI7 184 aa29.48■■■□□ 2.31
RPP38-201ENST00000378197 CCDC191Q8NCU4 936 aa29.48■■■□□ 2.31
RPP38-201ENST00000378197 ALDH1B1P30837 517 aa29.47■■■□□ 2.31
RPP38-201ENST00000378197 NEXNQ0ZGT2 675 aa29.46■■■□□ 2.31
RPP38-201ENST00000378197 RTL5Q5HYW3 569 aaPredicted RBP29.46■■■□□ 2.31
RPP38-201ENST00000378197 CWC25Q9NXE8 425 aaPredicted RBP29.46■■■□□ 2.31
RPP38-201ENST00000378197 LAMB2P55268 1798 aa29.46■■■□□ 2.31
RPP38-201ENST00000378197 DDX60Q8IY21 1712 aaKnown RBP29.45■■■□□ 2.31
RPP38-201ENST00000378197 IGKV5-2P06315 115 aa29.45■■■□□ 2.31
RPP38-201ENST00000378197 HOXA10P31260 410 aaPredicted RBP29.45■■■□□ 2.31
RPP38-201ENST00000378197 ZBTB38Q8NAP3 1195 aaPredicted RBP29.44■■■□□ 2.3
RPP38-201ENST00000378197 DNAAF4Q8WXU2 420 aa29.44■■■□□ 2.3
RPP38-201ENST00000378197 RBM17Q96I25 401 aaKnown RBP29.44■■■□□ 2.3
RPP38-201ENST00000378197 RASSF7Q02833 373 aa29.43■■■□□ 2.3
RPP38-201ENST00000378197 CWF19L2Q2TBE0 894 aaKnown RBP29.42■■■□□ 2.3
RPP38-201ENST00000378197 C7orf43Q8WVR3 580 aa29.42■■■□□ 2.3
RPP38-201ENST00000378197 NFKBIEO00221 500 aa29.42■■■□□ 2.3
RPP38-201ENST00000378197 IRS4O14654 1257 aaPredicted RBP29.42■■■□□ 2.3
RPP38-201ENST00000378197 PCCAP05165 728 aaPredicted RBP29.42■■■□□ 2.3
RPP38-201ENST00000378197 CRAMP1Q96RY5 1269 aa29.42■■■□□ 2.3
RPP38-201ENST00000378197 NEURL1BA8MQ27 555 aa29.41■■■□□ 2.3
RPP38-201ENST00000378197 SOGA3Q5TF21 947 aa29.41■■■□□ 2.3
RPP38-201ENST00000378197 F6X3S4 739 aa29.4■■■□□ 2.3
RPP38-201ENST00000378197 MRPL50Q8N5N7 158 aaKnown RBP29.4■■■□□ 2.3
RPP38-201ENST00000378197 ZNF784Q8NCA9 323 aaPredicted RBP29.4■■■□□ 2.3
RPP38-201ENST00000378197 JARID2Q92833 1246 aaPredicted RBP29.4■■■□□ 2.3
RPP38-201ENST00000378197 FER1L6Q2WGJ9 1857 aa29.39■■■□□ 2.3
RPP38-201ENST00000378197 C9orf131Q5VYM1 1079 aa29.39■■■□□ 2.3
RPP38-201ENST00000378197 SSH1Q8WYL5 1049 aa29.39■■■□□ 2.3
RPP38-201ENST00000378197 SBF1O95248 1867 aa29.38■■■□□ 2.29
RPP38-201ENST00000378197 CCDC93Q567U6 631 aa29.38■■■□□ 2.29
RPP38-201ENST00000378197 CT47B1P0C2W7 299 aaPredicted RBP29.37■■■□□ 2.29
RPP38-201ENST00000378197 OLFM4Q6UX06 510 aa29.37■■■□□ 2.29
RPP38-201ENST00000378197 LINS1Q8NG48 757 aa29.37■■■□□ 2.29
RPP38-201ENST00000378197 BCL2L13Q9BXK5 485 aa29.37■■■□□ 2.29
RPP38-201ENST00000378197 RNF181Q9P0P0 153 aa29.37■■■□□ 2.29
RPP38-201ENST00000378197 ABCC4O15439 1325 aa29.37■■■□□ 2.29
RPP38-201ENST00000378197 HSP90B1P14625 803 aaKnown RBP29.36■■■□□ 2.29
RPP38-201ENST00000378197 PRELPP51888 382 aa29.36■■■□□ 2.29
RPP38-201ENST00000378197 SF3B3Q15393 1217 aaKnown RBP29.36■■■□□ 2.29
RPP38-201ENST00000378197 ALDH1L2Q3SY69 923 aa29.36■■■□□ 2.29
RPP38-201ENST00000378197 DDX46Q7L014 1031 aaKnown RBP29.36■■■□□ 2.29
RPP38-201ENST00000378197 PPEF1O14829 653 aaPredicted RBP29.35■■■□□ 2.29
RPP38-201ENST00000378197 TAOK3Q9H2K8 898 aa29.35■■■□□ 2.29
RPP38-201ENST00000378197 CDHR2Q9BYE9 1310 aa29.35■■■□□ 2.29
RPP38-201ENST00000378197 LMNB1P20700 586 aa29.34■■■□□ 2.29
RPP38-201ENST00000378197 GCKRQ14397 625 aa29.34■■■□□ 2.29
RPP38-201ENST00000378197 LTBP3Q9NS15 1303 aa29.34■■■□□ 2.29
RPP38-201ENST00000378197 BEND3Q5T5X7 828 aa29.33■■■□□ 2.29
RPP38-201ENST00000378197 SMC4Q9NTJ3 1288 aa29.33■■■□□ 2.29
RPP38-201ENST00000378197 ZBED9Q6R2W3 1325 aa29.33■■■□□ 2.29
RPP38-201ENST00000378197 PDE8AO60658 829 aa29.32■■■□□ 2.28
RPP38-201ENST00000378197 CCDC88AQ3V6T2 1871 aa29.31■■■□□ 2.28
RPP38-201ENST00000378197 H7C1W4 665 aa29.31■■■□□ 2.28
RPP38-201ENST00000378197 GRAPQ13588 217 aa29.31■■■□□ 2.28
RPP38-201ENST00000378197 SLC51AQ86UW1 340 aa29.31■■■□□ 2.28
RPP38-201ENST00000378197 RTKN2Q8IZC4 609 aa29.31■■■□□ 2.28
RPP38-201ENST00000378197 GRAPLQ8TC17 118 aaPredicted RBP29.31■■■□□ 2.28
RPP38-201ENST00000378197 TAF1P21675 1872 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms