RNA–Protein interactions for RNA: ENST00000377885.6

RNF38-206, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 4,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-206ENST00000377885 USP44Q9H0E7 712 aa11.75□□□□□ -0.53
RNF38-206ENST00000377885 MRVI1Q9Y6F6 885 aa11.75□□□□□ -0.53
RNF38-206ENST00000377885 ELP1O95163 1332 aa11.75□□□□□ -0.53
RNF38-206ENST00000377885 TTC14Q96N46 770 aa11.75□□□□□ -0.53
RNF38-206ENST00000377885 CALCOCO1Q9P1Z2 691 aa11.75□□□□□ -0.53
RNF38-206ENST00000377885 ZSWIM6Q9HCJ5 1215 aa11.75□□□□□ -0.53
RNF38-206ENST00000377885 TRMT1Q9NXH9 659 aaKnown RBP11.75□□□□□ -0.53
RNF38-206ENST00000377885 ME1P48163 572 aa11.75□□□□□ -0.53
RNF38-206ENST00000377885 NEXNQ0ZGT2 675 aa11.74□□□□□ -0.53
RNF38-206ENST00000377885 LIG1P18858 919 aa11.74□□□□□ -0.53
RNF38-206ENST00000377885 TNNT3P45378 269 aaPredicted RBP11.74□□□□□ -0.53
RNF38-206ENST00000377885 ME3Q16798 604 aa11.74□□□□□ -0.53
RNF38-206ENST00000377885 TTC6Q86TZ1 520 aa11.74□□□□□ -0.53
RNF38-206ENST00000377885 FLT4P35916 1363 aa11.74□□□□□ -0.53
RNF38-206ENST00000377885 LRMPQ12912 555 aa11.74□□□□□ -0.53
RNF38-206ENST00000377885 BMS1Q14692 1282 aaKnown RBP11.74□□□□□ -0.53
RNF38-206ENST00000377885 CDC37L1Q7L3B6 337 aa11.74□□□□□ -0.53
RNF38-206ENST00000377885 ANKRD7Q92527 254 aa11.74□□□□□ -0.53
RNF38-206ENST00000377885 BABAM1Q9NWV8 329 aa11.74□□□□□ -0.53
RNF38-206ENST00000377885 ALKQ9UM73 1620 aa11.74□□□□□ -0.53
RNF38-206ENST00000377885 MAP3K19Q56UN5 1328 aa11.74□□□□□ -0.53
RNF38-206ENST00000377885 SLU7O95391 586 aaKnown RBP11.74□□□□□ -0.53
RNF38-206ENST00000377885 ERO1AQ96HE7 468 aa11.74□□□□□ -0.53
RNF38-206ENST00000377885 KCNF1Q9H3M0 494 aa11.74□□□□□ -0.53
RNF38-206ENST00000377885 ERICH4A6NGS2 130 aa11.73□□□□□ -0.53
RNF38-206ENST00000377885 GNL2Q13823 731 aaKnown RBP11.73□□□□□ -0.53
RNF38-206ENST00000377885 LEO1Q8WVC0 666 aaPredicted RBP11.73□□□□□ -0.53
RNF38-206ENST00000377885 DDX11Q96FC9 970 aa11.73□□□□□ -0.53
RNF38-206ENST00000377885 PI4KAP2A4QPH2 592 aa11.73□□□□□ -0.53
RNF38-206ENST00000377885 C1orf141Q5JVX7 400 aa11.73□□□□□ -0.53
RNF38-206ENST00000377885 PI4KAP1Q8N8J0 262 aa11.73□□□□□ -0.53
RNF38-206ENST00000377885 CCAR1Q8IX12 1150 aaKnown RBP11.73□□□□□ -0.53
RNF38-206ENST00000377885 TDRD7Q8NHU6 1098 aaKnown RBP11.73□□□□□ -0.53
RNF38-206ENST00000377885 SFPQP23246 707 aaKnown RBP eCLIP11.72□□□□□ -0.53
RNF38-206ENST00000377885 SNW1Q13573 536 aaKnown RBP11.72□□□□□ -0.53
RNF38-206ENST00000377885 EID1Q9Y6B2 187 aa11.72□□□□□ -0.53
RNF38-206ENST00000377885 TTC21AQ8NDW8 1320 aa11.72□□□□□ -0.53
RNF38-206ENST00000377885 MAP3K5Q99683 1374 aa11.72□□□□□ -0.53
RNF38-206ENST00000377885 NCBP1Q09161 790 aaKnown RBP11.72□□□□□ -0.53
RNF38-206ENST00000377885 FAM173BQ6P4H8 233 aa11.72□□□□□ -0.53
RNF38-206ENST00000377885 TIGD1Q96MW7 591 aa11.72□□□□□ -0.53
RNF38-206ENST00000377885 CCDC69A6NI79 296 aa11.72□□□□□ -0.53
RNF38-206ENST00000377885 CTIFO43310 598 aaKnown RBP11.72□□□□□ -0.53
RNF38-206ENST00000377885 BOLA2Q9H3K6 86 aa11.72□□□□□ -0.53
RNF38-206ENST00000377885 NMIQ13287 307 aaPredicted RBP11.72□□□□□ -0.53
RNF38-206ENST00000377885 GORABQ5T7V8 394 aa11.72□□□□□ -0.53
RNF38-206ENST00000377885 LARP1Q6PKG0 1096 aaKnown RBP11.72□□□□□ -0.53
RNF38-206ENST00000377885 PI4K2BQ8TCG2 481 aa11.72□□□□□ -0.53
RNF38-206ENST00000377885 PIK3C2BO00750 1634 aa11.72□□□□□ -0.53
RNF38-206ENST00000377885 MAP2P11137 1827 aaKnown RBP11.72□□□□□ -0.53
RNF38-206ENST00000377885 SALL3Q9BXA9 1300 aa11.72□□□□□ -0.53
RNF38-206ENST00000377885 LARGE1O95461 756 aa11.71□□□□□ -0.53
RNF38-206ENST00000377885 UBXN4Q92575 508 aa11.71□□□□□ -0.53
RNF38-206ENST00000377885 TCEANC2Q96MN5 208 aa11.71□□□□□ -0.53
RNF38-206ENST00000377885 EYA1Q99502 592 aa11.71□□□□□ -0.53
RNF38-206ENST00000377885 NOL10Q9BSC4 688 aaKnown RBP11.71□□□□□ -0.53
RNF38-206ENST00000377885 CDC25BP30305 580 aa11.71□□□□□ -0.53
RNF38-206ENST00000377885 PTH1RQ03431 593 aa11.71□□□□□ -0.53
RNF38-206ENST00000377885 CCDC150Q8NCX0 1101 aa11.71□□□□□ -0.53
RNF38-206ENST00000377885 PHAXQ9H814 394 aaKnown RBP11.71□□□□□ -0.53
RNF38-206ENST00000377885 TUBB4AP04350 444 aa11.71□□□□□ -0.53
RNF38-206ENST00000377885 TMCO3Q6UWJ1 677 aa11.71□□□□□ -0.53
RNF38-206ENST00000377885 SLC27A2O14975 620 aa11.71□□□□□ -0.54
RNF38-206ENST00000377885 TPM1P09493 284 aa11.71□□□□□ -0.54
RNF38-206ENST00000377885 RPS6KB1P23443 525 aa11.71□□□□□ -0.54
RNF38-206ENST00000377885 STK38Q15208 465 aa11.71□□□□□ -0.54
RNF38-206ENST00000377885 CCDC8Q9H0W5 538 aaPredicted RBP11.71□□□□□ -0.54
RNF38-206ENST00000377885 SYNE3Q6ZMZ3 975 aa11.7□□□□□ -0.54
RNF38-206ENST00000377885 BRF1Q92994 677 aa11.7□□□□□ -0.54
RNF38-206ENST00000377885 NEK1Q96PY6 1258 aa11.7□□□□□ -0.54
RNF38-206ENST00000377885 SIL1Q9H173 461 aa11.7□□□□□ -0.54
RNF38-206ENST00000377885 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.7□□□□□ -0.54
RNF38-206ENST00000377885 NRBP1Q9UHY1 535 aa11.7□□□□□ -0.54
RNF38-206ENST00000377885 TPCN1Q9ULQ1 816 aa11.7□□□□□ -0.54
RNF38-206ENST00000377885 V9GYY5 206 aaPredicted RBP11.7□□□□□ -0.54
RNF38-206ENST00000377885 ADCK5Q3MIX3 580 aa11.7□□□□□ -0.54
RNF38-206ENST00000377885 SIRT1Q96EB6 747 aa11.7□□□□□ -0.54
RNF38-206ENST00000377885 FMNL2Q96PY5 1086 aa11.7□□□□□ -0.54
RNF38-206ENST00000377885 FUCA2Q9BTY2 467 aa11.7□□□□□ -0.54
RNF38-206ENST00000377885 U3KPZ7 1027 aaPredicted RBP11.7□□□□□ -0.54
RNF38-206ENST00000377885 SBNO1A3KN83 1393 aa11.7□□□□□ -0.54
RNF38-206ENST00000377885 DTNBO60941 627 aa11.7□□□□□ -0.54
RNF38-206ENST00000377885 IL17RAQ96F46 866 aa11.7□□□□□ -0.54
RNF38-206ENST00000377885 NUTM2GQ5VZR2 741 aa11.7□□□□□ -0.54
RNF38-206ENST00000377885 RIC3Q7Z5B4 369 aa11.7□□□□□ -0.54
RNF38-206ENST00000377885 FSIP1Q8NA03 581 aa11.7□□□□□ -0.54
RNF38-206ENST00000377885 DBF4Q9UBU7 674 aaPredicted RBP11.7□□□□□ -0.54
RNF38-206ENST00000377885 CRB1P82279 1406 aa11.69□□□□□ -0.54
RNF38-206ENST00000377885 BTBD11A6QL63 1104 aa11.69□□□□□ -0.54
RNF38-206ENST00000377885 HMGB1P09429 215 aaKnown RBP11.69□□□□□ -0.54
RNF38-206ENST00000377885 POLA2Q14181 598 aa11.69□□□□□ -0.54
RNF38-206ENST00000377885 CREBRFQ8IUR6 639 aa11.69□□□□□ -0.54
RNF38-206ENST00000377885 CHPF2Q9P2E5 772 aa11.69□□□□□ -0.54
RNF38-206ENST00000377885 ALDH1L1O75891 902 aa11.69□□□□□ -0.54
RNF38-206ENST00000377885 LRRC8AQ8IWT6 810 aa11.69□□□□□ -0.54
RNF38-206ENST00000377885 BBXQ8WY36 941 aaPredicted RBP11.69□□□□□ -0.54
RNF38-206ENST00000377885 MRFAP1L1Q96HT8 127 aa11.69□□□□□ -0.54
RNF38-206ENST00000377885 TSPYL1Q9H0U9 437 aa11.69□□□□□ -0.54
RNF38-206ENST00000377885 TAOK2Q9UL54 1235 aa11.69□□□□□ -0.54
RNF38-206ENST00000377885 DLC1Q96QB1 1528 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms