RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 RIOK3O14730 519 aaKnown RBP16.53■□□□□ 0.24
SF1-205ENST00000377394 CWF19L2Q2TBE0 894 aaKnown RBP16.53■□□□□ 0.24
SF1-205ENST00000377394 TCHHQ07283 1943 aa16.53■□□□□ 0.24
SF1-205ENST00000377394 PHF14O94880 888 aa16.53■□□□□ 0.24
SF1-205ENST00000377394 ADCY5O95622 1261 aa16.53■□□□□ 0.24
SF1-205ENST00000377394 ARHGEF25Q86VW2 580 aa16.53■□□□□ 0.24
SF1-205ENST00000377394 RUFY2Q8WXA3 655 aa16.53■□□□□ 0.24
SF1-205ENST00000377394 ADCK5Q3MIX3 580 aa16.52■□□□□ 0.24
SF1-205ENST00000377394 ERC1Q8IUD2 1116 aa16.52■□□□□ 0.24
SF1-205ENST00000377394 KAZALD1Q96I82 304 aa16.52■□□□□ 0.24
SF1-205ENST00000377394 C1orf141Q5JVX7 400 aa16.52■□□□□ 0.24
SF1-205ENST00000377394 ZNF771Q7L3S4 317 aaPredicted RBP16.52■□□□□ 0.24
SF1-205ENST00000377394 ZSWIM6Q9HCJ5 1215 aa16.52■□□□□ 0.24
SF1-205ENST00000377394 F13A1P00488 732 aa16.52■□□□□ 0.23
SF1-205ENST00000377394 GCP02774 474 aa16.52■□□□□ 0.23
SF1-205ENST00000377394 VPS53Q5VIR6 699 aa16.52■□□□□ 0.23
SF1-205ENST00000377394 PRPF40BQ6NWY9 871 aaKnown RBP16.52■□□□□ 0.23
SF1-205ENST00000377394 TM6SF1Q9BZW5 370 aa16.52■□□□□ 0.23
SF1-205ENST00000377394 SPTLC3Q9NUV7 552 aa16.52■□□□□ 0.23
SF1-205ENST00000377394 SMC3Q9UQE7 1217 aa16.52■□□□□ 0.23
SF1-205ENST00000377394 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.52■□□□□ 0.23
SF1-205ENST00000377394 UTYO14607 1347 aa16.51■□□□□ 0.23
SF1-205ENST00000377394 IFIT2P09913 472 aaKnown RBP16.51■□□□□ 0.23
SF1-205ENST00000377394 EVI5LQ96CN4 794 aa16.51■□□□□ 0.23
SF1-205ENST00000377394 NECTIN1Q15223 517 aa16.51■□□□□ 0.23
SF1-205ENST00000377394 GPATCH3Q96I76 525 aa16.51■□□□□ 0.23
SF1-205ENST00000377394 SUCLG2Q96I99 432 aa16.51■□□□□ 0.23
SF1-205ENST00000377394 JAKMIP1Q96N16 626 aaKnown RBP16.51■□□□□ 0.23
SF1-205ENST00000377394 SASH1O94885 1247 aa16.5■□□□□ 0.23
SF1-205ENST00000377394 PLCB2Q00722 1185 aa16.5■□□□□ 0.23
SF1-205ENST00000377394 CCDC183Q5T5S1 534 aa16.5■□□□□ 0.23
SF1-205ENST00000377394 AACSQ86V21 672 aa16.5■□□□□ 0.23
SF1-205ENST00000377394 PDRG1Q9NUG6 133 aa16.5■□□□□ 0.23
SF1-205ENST00000377394 ST3GAL1Q11201 340 aa16.5■□□□□ 0.23
SF1-205ENST00000377394 LINS1Q8NG48 757 aa16.5■□□□□ 0.23
SF1-205ENST00000377394 PYCARDQ9ULZ3 195 aa16.5■□□□□ 0.23
SF1-205ENST00000377394 HDAC5Q9UQL6 1122 aa16.5■□□□□ 0.23
SF1-205ENST00000377394 SLIT3O75094 1523 aa16.5■□□□□ 0.23
SF1-205ENST00000377394 GRM8O00222 908 aa16.49■□□□□ 0.23
SF1-205ENST00000377394 UBE2HP62256 183 aa16.49■□□□□ 0.23
SF1-205ENST00000377394 ANKLE2Q86XL3 938 aa16.49■□□□□ 0.23
SF1-205ENST00000377394 CCDC83Q8IWF9 413 aa16.49■□□□□ 0.23
SF1-205ENST00000377394 ANKRD24Q8TF21 1146 aa16.49■□□□□ 0.23
SF1-205ENST00000377394 ANKRD7Q92527 254 aa16.49■□□□□ 0.23
SF1-205ENST00000377394 CCDC171Q6TFL3 1326 aa16.49■□□□□ 0.23
SF1-205ENST00000377394 HCLS1P14317 486 aaPredicted RBP16.49■□□□□ 0.23
SF1-205ENST00000377394 EAF2Q96CJ1 260 aaPredicted RBP16.49■□□□□ 0.23
SF1-205ENST00000377394 CYP46A1Q9Y6A2 500 aa16.49■□□□□ 0.23
SF1-205ENST00000377394 GJB2P29033 226 aa16.48■□□□□ 0.23
SF1-205ENST00000377394 MAPK8IP2Q13387 824 aaPredicted RBP16.48■□□□□ 0.23
SF1-205ENST00000377394 PDIA6Q15084 440 aa16.48■□□□□ 0.23
SF1-205ENST00000377394 BICC1Q9H694 974 aaKnown RBP16.48■□□□□ 0.23
SF1-205ENST00000377394 MTMR6Q9Y217 621 aa16.48■□□□□ 0.23
SF1-205ENST00000377394 UVSSAQ2YD98 709 aa16.48■□□□□ 0.23
SF1-205ENST00000377394 FAM184AQ8NB25 1140 aa16.48■□□□□ 0.23
SF1-205ENST00000377394 ZSCAN31Q96LW9 406 aaPredicted RBP16.48■□□□□ 0.23
SF1-205ENST00000377394 SIPA1L3O60292 1781 aaPredicted RBP16.48■□□□□ 0.23
SF1-205ENST00000377394 FAM227BQ96M60 508 aa16.48■□□□□ 0.23
SF1-205ENST00000377394 ORAI2Q96SN7 254 aa16.48■□□□□ 0.23
SF1-205ENST00000377394 DDX21Q9NR30 783 aaKnown RBP eCLIP16.48■□□□□ 0.23
SF1-205ENST00000377394 SH2B1Q9NRF2 756 aaPredicted RBP16.48■□□□□ 0.23
SF1-205ENST00000377394 SNRKQ9NRH2 765 aa16.48■□□□□ 0.23
SF1-205ENST00000377394 AXIN2Q9Y2T1 843 aa16.48■□□□□ 0.23
SF1-205ENST00000377394 CAMTA1Q9Y6Y1 1673 aa16.47■□□□□ 0.23
SF1-205ENST00000377394 DTNBO60941 627 aa16.47■□□□□ 0.23
SF1-205ENST00000377394 MAP4K1Q92918 833 aa16.47■□□□□ 0.23
SF1-205ENST00000377394 ATP6V1DQ9Y5K8 247 aa16.47■□□□□ 0.23
SF1-205ENST00000377394 RBM8AQ9Y5S9 174 aaKnown RBP16.47■□□□□ 0.23
SF1-205ENST00000377394 NMIQ13287 307 aaPredicted RBP16.47■□□□□ 0.23
SF1-205ENST00000377394 ME3Q16798 604 aa16.47■□□□□ 0.23
SF1-205ENST00000377394 CREB3L3Q68CJ9 461 aa16.47■□□□□ 0.23
SF1-205ENST00000377394 PLCD3Q8N3E9 789 aa16.47■□□□□ 0.23
SF1-205ENST00000377394 KCNF1Q9H3M0 494 aa16.47■□□□□ 0.23
SF1-205ENST00000377394 DDX54Q8TDD1 881 aaKnown RBP16.46■□□□□ 0.23
SF1-205ENST00000377394 TLR7Q9NYK1 1049 aaKnown RBP16.46■□□□□ 0.23
SF1-205ENST00000377394 ADAMTS7Q9UKP4 1686 aa16.46■□□□□ 0.23
SF1-205ENST00000377394 FIBPO43427 364 aa16.46■□□□□ 0.23
SF1-205ENST00000377394 IGKV5-2P06315 115 aa16.46■□□□□ 0.23
SF1-205ENST00000377394 G3BP1Q13283 466 aaKnown RBP eCLIP16.46■□□□□ 0.235e-7■□□□□ 9.3
SF1-205ENST00000377394 CCDC8Q9H0W5 538 aaPredicted RBP16.46■□□□□ 0.23
SF1-205ENST00000377394 LMTK3Q96Q04 1460 aa16.46■□□□□ 0.23
SF1-205ENST00000377394 AP5Z1O43299 807 aa16.45■□□□□ 0.22
SF1-205ENST00000377394 COL9A3Q14050 684 aaPredicted RBP16.45■□□□□ 0.22
SF1-205ENST00000377394 HIP1O00291 1037 aa16.45■□□□□ 0.22
SF1-205ENST00000377394 DDX58O95786 925 aaKnown RBP16.45■□□□□ 0.22
SF1-205ENST00000377394 ZKSCAN1P17029 563 aaPredicted RBP16.45■□□□□ 0.22
SF1-205ENST00000377394 DNM1Q05193 864 aaKnown RBP16.45■□□□□ 0.22
SF1-205ENST00000377394 AIMP1Q12904 312 aaKnown RBP16.45■□□□□ 0.22
SF1-205ENST00000377394 KIAA1524Q8TCG1 905 aa16.45■□□□□ 0.22
SF1-205ENST00000377394 TPCN1Q9ULQ1 816 aa16.45■□□□□ 0.22
SF1-205ENST00000377394 NAA30Q147X3 362 aaPredicted RBP16.44■□□□□ 0.22
SF1-205ENST00000377394 SLC27A2O14975 620 aa16.44■□□□□ 0.22
SF1-205ENST00000377394 NECAB1Q8N987 351 aa16.44■□□□□ 0.22
SF1-205ENST00000377394 SPC24Q8NBT2 197 aa16.44■□□□□ 0.22
SF1-205ENST00000377394 FUCA2Q9BTY2 467 aa16.44■□□□□ 0.22
SF1-205ENST00000377394 A0A0D9SFI3 127 aa16.44■□□□□ 0.22
SF1-205ENST00000377394 NCBP1Q09161 790 aaKnown RBP16.43■□□□□ 0.22
SF1-205ENST00000377394 NPHP4O75161 1426 aaPredicted RBP16.43■□□□□ 0.22
SF1-205ENST00000377394 CTIFO43310 598 aaKnown RBP16.43■□□□□ 0.22
SF1-205ENST00000377394 CHAF1AQ13111 956 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms