RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 C16orf71Q8IYS4 520 aaPredicted RBP10.09□□□□□ -0.79
CRNKL1-202ENST00000377340 CCDC43Q96MW1 224 aaKnown RBP10.09□□□□□ -0.79
CRNKL1-202ENST00000377340 JAKMIP1Q96N16 626 aaKnown RBP10.09□□□□□ -0.79
CRNKL1-202ENST00000377340 ADGRB3O60242 1522 aa10.09□□□□□ -0.79
CRNKL1-202ENST00000377340 ZBTB7AO95365 584 aa10.09□□□□□ -0.79
CRNKL1-202ENST00000377340 LARGE2Q8N3Y3 721 aa10.09□□□□□ -0.79
CRNKL1-202ENST00000377340 CTNNA3Q9UI47 895 aa10.09□□□□□ -0.79
CRNKL1-202ENST00000377340 AGLP35573 1532 aa10.09□□□□□ -0.79
CRNKL1-202ENST00000377340 LDHCP07864 332 aa10.08□□□□□ -0.8
CRNKL1-202ENST00000377340 BLOC1S2Q6QNY1 142 aa10.08□□□□□ -0.8
CRNKL1-202ENST00000377340 CCDC191Q8NCU4 936 aa10.08□□□□□ -0.8
CRNKL1-202ENST00000377340 ADAMTS13Q76LX8 1427 aa10.08□□□□□ -0.8
CRNKL1-202ENST00000377340 MYO1BO43795 1136 aa10.08□□□□□ -0.8
CRNKL1-202ENST00000377340 SRP68Q9UHB9 627 aaKnown RBP10.08□□□□□ -0.8
CRNKL1-202ENST00000377340 CYP46A1Q9Y6A2 500 aa10.08□□□□□ -0.8
CRNKL1-202ENST00000377340 CCDC69A6NI79 296 aa10.08□□□□□ -0.8
CRNKL1-202ENST00000377340 CYP7A1P22680 504 aa10.08□□□□□ -0.8
CRNKL1-202ENST00000377340 ATP8B2P98198 1209 aa10.08□□□□□ -0.8
CRNKL1-202ENST00000377340 IMMTQ16891 758 aaKnown RBP10.08□□□□□ -0.8
CRNKL1-202ENST00000377340 PRPF40BQ6NWY9 871 aaKnown RBP10.08□□□□□ -0.8
CRNKL1-202ENST00000377340 DRC7Q8IY82 874 aa10.08□□□□□ -0.8
CRNKL1-202ENST00000377340 ZNF444Q8N0Y2 327 aaPredicted RBP10.08□□□□□ -0.8
CRNKL1-202ENST00000377340 FEZ1Q99689 392 aa10.08□□□□□ -0.8
CRNKL1-202ENST00000377340 ANKARQ7Z5J8 1434 aa10.08□□□□□ -0.8
CRNKL1-202ENST00000377340 TFCP2Q12800 502 aa10.08□□□□□ -0.8
CRNKL1-202ENST00000377340 RBM17Q96I25 401 aaKnown RBP10.08□□□□□ -0.8
CRNKL1-202ENST00000377340 LRRIQ1Q96JM4 1722 aa10.08□□□□□ -0.8
CRNKL1-202ENST00000377340 A0A0U1RQG5 324 aaPredicted RBP10.07□□□□□ -0.8
CRNKL1-202ENST00000377340 PES1O00541 588 aaKnown RBP10.07□□□□□ -0.8
CRNKL1-202ENST00000377340 BAG3O95817 575 aa10.07□□□□□ -0.8
CRNKL1-202ENST00000377340 TCIRG1Q13488 830 aa10.07□□□□□ -0.8
CRNKL1-202ENST00000377340 DPP8Q6V1X1 898 aaPredicted RBP10.07□□□□□ -0.8
CRNKL1-202ENST00000377340 NLGN1Q8N2Q7 840 aa10.07□□□□□ -0.8
CRNKL1-202ENST00000377340 ZNF408Q9H9D4 720 aa10.07□□□□□ -0.8
CRNKL1-202ENST00000377340 ATP7BP35670 1465 aa10.07□□□□□ -0.8
CRNKL1-202ENST00000377340 ARHGAP27Q6ZUM4 889 aa10.07□□□□□ -0.8
CRNKL1-202ENST00000377340 SLF2Q8IX21 1173 aa10.07□□□□□ -0.8
CRNKL1-202ENST00000377340 TNS3Q68CZ2 1445 aa10.07□□□□□ -0.8
CRNKL1-202ENST00000377340 PDE8AO60658 829 aa10.07□□□□□ -0.8
CRNKL1-202ENST00000377340 PPFIA3O75145 1194 aa10.07□□□□□ -0.8
CRNKL1-202ENST00000377340 MYCNP04198 464 aaPredicted RBP10.07□□□□□ -0.8
CRNKL1-202ENST00000377340 GCKRQ14397 625 aa10.07□□□□□ -0.8
CRNKL1-202ENST00000377340 SLC9C2Q5TAH2 1124 aa10.07□□□□□ -0.8
CRNKL1-202ENST00000377340 LARP6Q9BRS8 491 aaKnown RBP10.07□□□□□ -0.8
CRNKL1-202ENST00000377340 ANO8Q9HCE9 1232 aaPredicted RBP10.07□□□□□ -0.8
CRNKL1-202ENST00000377340 SYNMO15061 1565 aa10.07□□□□□ -0.8
CRNKL1-202ENST00000377340 AATKQ6ZMQ8 1374 aa10.06□□□□□ -0.8
CRNKL1-202ENST00000377340 L1TD1Q5T7N2 865 aaKnown RBP10.06□□□□□ -0.8
CRNKL1-202ENST00000377340 ANKRD44Q8N8A2 993 aa10.06□□□□□ -0.8
CRNKL1-202ENST00000377340 MIGA1Q8NAN2 632 aa10.06□□□□□ -0.8
CRNKL1-202ENST00000377340 XBP1P17861 261 aa10.06□□□□□ -0.8
CRNKL1-202ENST00000377340 CEBPZQ03701 1054 aaKnown RBP10.06□□□□□ -0.8
CRNKL1-202ENST00000377340 ZNF804AQ7Z570 1209 aa10.06□□□□□ -0.8
CRNKL1-202ENST00000377340 FLAD1Q8NFF5 587 aa10.06□□□□□ -0.8
CRNKL1-202ENST00000377340 PPRC1Q5VV67 1664 aaKnown RBP10.06□□□□□ -0.8
CRNKL1-202ENST00000377340 HOXB7P09629 217 aa10.06□□□□□ -0.8
CRNKL1-202ENST00000377340 CHMP4BP1P59074 171 aa10.06□□□□□ -0.8
CRNKL1-202ENST00000377340 HDAC9Q9UKV0 1011 aa10.06□□□□□ -0.8
CRNKL1-202ENST00000377340 THRAP3Q9Y2W1 955 aaKnown RBP10.06□□□□□ -0.8
CRNKL1-202ENST00000377340 NAA16Q6N069 864 aaPredicted RBP10.06□□□□□ -0.8
CRNKL1-202ENST00000377340 BABAM1Q9NWV8 329 aa10.06□□□□□ -0.8
CRNKL1-202ENST00000377340 ATP6V1DQ9Y5K8 247 aa10.06□□□□□ -0.8
CRNKL1-202ENST00000377340 INO80Q9ULG1 1556 aaPredicted RBP10.06□□□□□ -0.8
CRNKL1-202ENST00000377340 UQCRFS1P1P0C7P4 283 aa10.05□□□□□ -0.8
CRNKL1-202ENST00000377340 RPS8P62241 208 aaKnown RBP10.05□□□□□ -0.8
CRNKL1-202ENST00000377340 C2CD5Q86YS7 1000 aa10.05□□□□□ -0.8
CRNKL1-202ENST00000377340 EYA3Q99504 573 aa10.05□□□□□ -0.8
CRNKL1-202ENST00000377340 ZNF213O14771 459 aa10.05□□□□□ -0.8
CRNKL1-202ENST00000377340 SPTY2D1Q68D10 685 aaPredicted RBP10.05□□□□□ -0.8
CRNKL1-202ENST00000377340 SUCLG2Q96I99 432 aa10.05□□□□□ -0.8
CRNKL1-202ENST00000377340 STX8Q9UNK0 236 aa10.05□□□□□ -0.8
CRNKL1-202ENST00000377340 U3KPZ7 1027 aaPredicted RBP10.05□□□□□ -0.8
CRNKL1-202ENST00000377340 E9PCH4 1651 aa10.05□□□□□ -0.8
CRNKL1-202ENST00000377340 MMP10P09238 476 aa10.05□□□□□ -0.8
CRNKL1-202ENST00000377340 BICD2Q8TD16 824 aa10.05□□□□□ -0.8
CRNKL1-202ENST00000377340 ZNF526Q8TF50 670 aaPredicted RBP10.05□□□□□ -0.8
CRNKL1-202ENST00000377340 PALLDQ8WX93 1383 aa10.05□□□□□ -0.8
CRNKL1-202ENST00000377340 PRKG1Q13976 671 aa10.04□□□□□ -0.8
CRNKL1-202ENST00000377340 CCDC96Q2M329 555 aa10.04□□□□□ -0.8
CRNKL1-202ENST00000377340 RAB11FIP4Q86YS3 637 aa10.04□□□□□ -0.8
CRNKL1-202ENST00000377340 DDX11Q96FC9 970 aa10.04□□□□□ -0.8
CRNKL1-202ENST00000377340 BRMS1Q9HCU9 246 aa10.04□□□□□ -0.8
CRNKL1-202ENST00000377340 GGA1Q9UJY5 639 aa10.04□□□□□ -0.8
CRNKL1-202ENST00000377340 SPATA31A6Q5VVP1 1343 aa10.04□□□□□ -0.8
CRNKL1-202ENST00000377340 PTPRUQ92729 1446 aa10.04□□□□□ -0.8
CRNKL1-202ENST00000377340 CASTP20810 708 aaKnown RBP10.04□□□□□ -0.8
CRNKL1-202ENST00000377340 DNTTIP2Q5QJE6 756 aaKnown RBP10.04□□□□□ -0.8
CRNKL1-202ENST00000377340 CEP85Q6P2H3 762 aa10.04□□□□□ -0.8
CRNKL1-202ENST00000377340 DEFB132Q7Z7B7 95 aa10.04□□□□□ -0.8
CRNKL1-202ENST00000377340 TRIM22Q8IYM9 498 aa10.04□□□□□ -0.8
CRNKL1-202ENST00000377340 NDUFB9Q9Y6M9 179 aa10.04□□□□□ -0.8
CRNKL1-202ENST00000377340 MADDQ8WXG6 1647 aa10.04□□□□□ -0.8
CRNKL1-202ENST00000377340 KDM5AP29375 1690 aaKnown RBP10.04□□□□□ -0.8
CRNKL1-202ENST00000377340 EYA2O00167 538 aa10.04□□□□□ -0.8
CRNKL1-202ENST00000377340 SERPINB2P05120 415 aa10.04□□□□□ -0.8
CRNKL1-202ENST00000377340 TTF1Q15361 905 aaPredicted RBP10.04□□□□□ -0.8
CRNKL1-202ENST00000377340 TXNRD1Q16881 649 aa10.04□□□□□ -0.8
CRNKL1-202ENST00000377340 PLEKHF1Q96S99 279 aa10.04□□□□□ -0.8
CRNKL1-202ENST00000377340 ZNF287Q9HBT7 754 aa10.04□□□□□ -0.8
CRNKL1-202ENST00000377340 VAT1LQ9HCJ6 419 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 778.1 ms