RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 TXNDC2Q86VQ3 553 aa10.47□□□□□ -0.73
CRNKL1-201ENST00000377327 CARD6Q9BX69 1037 aa10.47□□□□□ -0.73
CRNKL1-201ENST00000377327 MRC2Q9UBG0 1479 aa10.47□□□□□ -0.73
CRNKL1-201ENST00000377327 PHACTR2O75167 634 aa10.47□□□□□ -0.73
CRNKL1-201ENST00000377327 TXLNAP40222 546 aa10.47□□□□□ -0.73
CRNKL1-201ENST00000377327 RNF187Q5TA31 235 aaPredicted RBP10.47□□□□□ -0.73
CRNKL1-201ENST00000377327 RUFY3Q7L099 469 aa10.47□□□□□ -0.73
CRNKL1-201ENST00000377327 NBPF11Q86T75 865 aa10.47□□□□□ -0.73
CRNKL1-201ENST00000377327 KCNG4Q8TDN1 519 aa10.47□□□□□ -0.73
CRNKL1-201ENST00000377327 UTP14AQ9BVJ6 771 aaKnown RBP10.47□□□□□ -0.73
CRNKL1-201ENST00000377327 CTTNBP2Q8WZ74 1663 aa10.46□□□□□ -0.73
CRNKL1-201ENST00000377327 HDXQ7Z353 690 aa10.46□□□□□ -0.73
CRNKL1-201ENST00000377327 SNX14Q9Y5W7 946 aa10.46□□□□□ -0.73
CRNKL1-201ENST00000377327 GOLGA6L7A0A1B0GV03 622 aa10.46□□□□□ -0.74
CRNKL1-201ENST00000377327 EBAG9O00559 213 aa10.46□□□□□ -0.74
CRNKL1-201ENST00000377327 TUBBP07437 444 aa10.46□□□□□ -0.74
CRNKL1-201ENST00000377327 CCDC102BQ68D86 513 aa10.46□□□□□ -0.74
CRNKL1-201ENST00000377327 ZSCAN20P17040 1043 aaPredicted RBP10.46□□□□□ -0.74
CRNKL1-201ENST00000377327 LIG1P18858 919 aa10.46□□□□□ -0.74
CRNKL1-201ENST00000377327 TERF2Q15554 542 aa10.46□□□□□ -0.74
CRNKL1-201ENST00000377327 CCDC91Q7Z6B0 441 aa10.46□□□□□ -0.74
CRNKL1-201ENST00000377327 IMPACTQ9P2X3 320 aa10.46□□□□□ -0.74
CRNKL1-201ENST00000377327 OAS2P29728 719 aaKnown RBP10.45□□□□□ -0.74
CRNKL1-201ENST00000377327 SYKP43405 635 aa10.45□□□□□ -0.74
CRNKL1-201ENST00000377327 PPP2R3AQ06190 1150 aa10.45□□□□□ -0.74
CRNKL1-201ENST00000377327 STIM1Q13586 685 aa10.45□□□□□ -0.74
CRNKL1-201ENST00000377327 NUTM2GQ5VZR2 741 aa10.45□□□□□ -0.74
CRNKL1-201ENST00000377327 HSPA4P34932 840 aa10.45□□□□□ -0.74
CRNKL1-201ENST00000377327 IMMTQ16891 758 aaKnown RBP10.45□□□□□ -0.74
CRNKL1-201ENST00000377327 LEO1Q8WVC0 666 aaPredicted RBP10.45□□□□□ -0.74
CRNKL1-201ENST00000377327 NUDT16Q96DE0 195 aaKnown RBP10.45□□□□□ -0.74
CRNKL1-201ENST00000377327 SLC26A8Q96RN1 970 aa10.45□□□□□ -0.74
CRNKL1-201ENST00000377327 POLKQ9UBT6 870 aa10.45□□□□□ -0.74
CRNKL1-201ENST00000377327 MYO6Q9UM54 1294 aa10.45□□□□□ -0.74
CRNKL1-201ENST00000377327 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.45□□□□□ -0.742e-6■■■□□ 15.9
CRNKL1-201ENST00000377327 PPFIA3O75145 1194 aa10.45□□□□□ -0.74
CRNKL1-201ENST00000377327 CCDC175P0C221 793 aa10.45□□□□□ -0.74
CRNKL1-201ENST00000377327 CUL4AQ13619 759 aa10.45□□□□□ -0.74
CRNKL1-201ENST00000377327 CT47A1Q5JQC4 288 aaPredicted RBP10.45□□□□□ -0.74
CRNKL1-201ENST00000377327 CCDC158Q5M9N0 1113 aa10.45□□□□□ -0.74
CRNKL1-201ENST00000377327 CREB3L3Q68CJ9 461 aa10.45□□□□□ -0.74
CRNKL1-201ENST00000377327 LUC7LQ9NQ29 371 aaKnown RBP10.45□□□□□ -0.74
CRNKL1-201ENST00000377327 SHANK2Q9UPX8 1470 aa10.45□□□□□ -0.74
CRNKL1-201ENST00000377327 SGSM2O43147 1006 aa10.44□□□□□ -0.74
CRNKL1-201ENST00000377327 SMC1AQ14683 1233 aaKnown RBP10.44□□□□□ -0.74
CRNKL1-201ENST00000377327 KRT24Q2M2I5 525 aa10.44□□□□□ -0.74
CRNKL1-201ENST00000377327 PLEKHO1Q53GL0 409 aaPredicted RBP10.44□□□□□ -0.74
CRNKL1-201ENST00000377327 PALD1Q9ULE6 856 aa10.44□□□□□ -0.74
CRNKL1-201ENST00000377327 ITSN2Q9NZM3 1697 aa10.44□□□□□ -0.74
CRNKL1-201ENST00000377327 RAD50Q92878 1312 aa10.44□□□□□ -0.74
CRNKL1-201ENST00000377327 EIF5P55010 431 aaKnown RBP10.44□□□□□ -0.74
CRNKL1-201ENST00000377327 LARP1Q6PKG0 1096 aaKnown RBP10.44□□□□□ -0.74
CRNKL1-201ENST00000377327 LRRC8AQ8IWT6 810 aa10.44□□□□□ -0.74
CRNKL1-201ENST00000377327 NEK11Q8NG66 645 aa10.44□□□□□ -0.74
CRNKL1-201ENST00000377327 PPM1EQ8WY54 764 aa10.44□□□□□ -0.74
CRNKL1-201ENST00000377327 DDX41Q9UJV9 622 aaKnown RBP10.44□□□□□ -0.74
CRNKL1-201ENST00000377327 PPIP5K1Q6PFW1 1433 aa10.44□□□□□ -0.74
CRNKL1-201ENST00000377327 FAM160A1Q05DH4 1040 aa10.44□□□□□ -0.74
CRNKL1-201ENST00000377327 NUP88Q99567 741 aaPredicted RBP10.44□□□□□ -0.74
CRNKL1-201ENST00000377327 ORC3Q9UBD5 711 aaPredicted RBP10.44□□□□□ -0.74
CRNKL1-201ENST00000377327 ELP1O95163 1332 aa10.44□□□□□ -0.74
CRNKL1-201ENST00000377327 RTL1A6NKG5 1358 aa10.44□□□□□ -0.74
CRNKL1-201ENST00000377327 PIP4K2BP78356 416 aa10.44□□□□□ -0.74
CRNKL1-201ENST00000377327 JARID2Q92833 1246 aaPredicted RBP10.44□□□□□ -0.74
CRNKL1-201ENST00000377327 TBC1D2BQ9UPU7 963 aa10.44□□□□□ -0.74
CRNKL1-201ENST00000377327 KDM5BQ9UGL1 1544 aa10.44□□□□□ -0.74
CRNKL1-201ENST00000377327 ABCC4O15439 1325 aa10.43□□□□□ -0.74
CRNKL1-201ENST00000377327 CTAGE9A4FU28 777 aa10.43□□□□□ -0.74
CRNKL1-201ENST00000377327 YEATS4O95619 227 aa10.43□□□□□ -0.74
CRNKL1-201ENST00000377327 FKBP4Q02790 459 aaKnown RBP eCLIP10.43□□□□□ -0.74
CRNKL1-201ENST00000377327 NCBP1Q09161 790 aaKnown RBP10.43□□□□□ -0.74
CRNKL1-201ENST00000377327 WASF1Q92558 559 aa10.43□□□□□ -0.74
CRNKL1-201ENST00000377327 PUF60Q9UHX1 559 aaKnown RBP10.43□□□□□ -0.74
CRNKL1-201ENST00000377327 SOS1Q07889 1333 aaPredicted RBP10.43□□□□□ -0.74
CRNKL1-201ENST00000377327 WDR62O43379 1518 aa10.43□□□□□ -0.74
CRNKL1-201ENST00000377327 WAPLQ7Z5K2 1190 aa10.43□□□□□ -0.74
CRNKL1-201ENST00000377327 ZBTB9Q96C00 473 aa10.43□□□□□ -0.74
CRNKL1-201ENST00000377327 MPHOSPH8Q99549 860 aa10.43□□□□□ -0.74
CRNKL1-201ENST00000377327 SPTLC3Q9NUV7 552 aa10.43□□□□□ -0.74
CRNKL1-201ENST00000377327 RNF216Q9NWF9 866 aaPredicted RBP10.43□□□□□ -0.74
CRNKL1-201ENST00000377327 NRBP1Q9UHY1 535 aa10.43□□□□□ -0.74
CRNKL1-201ENST00000377327 CEP131Q9UPN4 1083 aa10.43□□□□□ -0.74
CRNKL1-201ENST00000377327 TTC41PQ6P2S7 1318 aa10.43□□□□□ -0.74
CRNKL1-201ENST00000377327 ERLIN2O94905 339 aa10.43□□□□□ -0.74
CRNKL1-201ENST00000377327 HSP90AA4PQ58FG1 418 aa10.43□□□□□ -0.74
CRNKL1-201ENST00000377327 RRP12Q5JTH9 1297 aaKnown RBP10.43□□□□□ -0.74
CRNKL1-201ENST00000377327 ATL3Q6DD88 541 aa10.43□□□□□ -0.74
CRNKL1-201ENST00000377327 MRFAP1L1Q96HT8 127 aa10.43□□□□□ -0.74
CRNKL1-201ENST00000377327 DRC1Q96MC2 740 aa10.43□□□□□ -0.74
CRNKL1-201ENST00000377327 LRRC2Q9BYS8 371 aa10.43□□□□□ -0.74
CRNKL1-201ENST00000377327 MSH6P52701 1360 aa10.43□□□□□ -0.74
CRNKL1-201ENST00000377327 CLSTN1O94985 981 aa10.42□□□□□ -0.74
CRNKL1-201ENST00000377327 PAFAH1B1P43034 410 aa10.42□□□□□ -0.74
CRNKL1-201ENST00000377327 KARSQ15046 597 aaKnown RBP10.42□□□□□ -0.74
CRNKL1-201ENST00000377327 Q6ZUG5 572 aa10.42□□□□□ -0.74
CRNKL1-201ENST00000377327 KLHL34Q8N239 644 aa10.42□□□□□ -0.74
CRNKL1-201ENST00000377327 MBD5Q9P267 1494 aa10.42□□□□□ -0.74
CRNKL1-201ENST00000377327 MAGI3Q5TCQ9 1506 aa10.42□□□□□ -0.74
CRNKL1-201ENST00000377327 SPA17Q15506 151 aa10.42□□□□□ -0.74
CRNKL1-201ENST00000377327 SYTL4Q96C24 671 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 644.7 ms