RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 BABAM1Q9NWV8 329 aa20.84■□□□□ 0.93
CLSTN1-202ENST00000377298 HLA-DOAP06340 250 aa20.84■□□□□ 0.93
CLSTN1-202ENST00000377298 DEF6Q9H4E7 631 aa20.84■□□□□ 0.93
CLSTN1-202ENST00000377298 MYO6Q9UM54 1294 aa20.84■□□□□ 0.93
CLSTN1-202ENST00000377298 PDE1AP54750 535 aa20.83■□□□□ 0.93
CLSTN1-202ENST00000377298 GRPEL1Q9HAV7 217 aa20.83■□□□□ 0.93
CLSTN1-202ENST00000377298 PCDHB15Q9Y5E8 787 aa20.83■□□□□ 0.93
CLSTN1-202ENST00000377298 TMEM67Q5HYA8 995 aa20.83■□□□□ 0.93
CLSTN1-202ENST00000377298 CUL5Q93034 780 aa20.83■□□□□ 0.93
CLSTN1-202ENST00000377298 TSHZ3Q63HK5 1081 aa20.83■□□□□ 0.93
CLSTN1-202ENST00000377298 CCDC82Q8N4S0 544 aa20.83■□□□□ 0.93
CLSTN1-202ENST00000377298 TMEM2Q9UHN6 1383 aa20.83■□□□□ 0.92
CLSTN1-202ENST00000377298 MAP7D2Q96T17 732 aa20.83■□□□□ 0.92
CLSTN1-202ENST00000377298 TTLL12Q14166 644 aaPredicted RBP20.82■□□□□ 0.92
CLSTN1-202ENST00000377298 CCDC194A0A1B0GVG4 234 aa20.82■□□□□ 0.92
CLSTN1-202ENST00000377298 TSPY2A6NKD2 308 aa20.82■□□□□ 0.92
CLSTN1-202ENST00000377298 CCDC12Q8WUD4 166 aaPredicted RBP20.82■□□□□ 0.92
CLSTN1-202ENST00000377298 TPTE2Q6XPS3 522 aa20.82■□□□□ 0.92
CLSTN1-202ENST00000377298 BTG4Q9NY30 223 aa20.82■□□□□ 0.92
CLSTN1-202ENST00000377298 HSP90B2PQ58FF3 399 aa20.82■□□□□ 0.92
CLSTN1-202ENST00000377298 RTCBQ9Y3I0 505 aaKnown RBP20.82■□□□□ 0.92
CLSTN1-202ENST00000377298 NLRP5P59047 1200 aa20.81■□□□□ 0.92
CLSTN1-202ENST00000377298 PAXIP1Q6ZW49 1069 aaPredicted RBP20.81■□□□□ 0.92
CLSTN1-202ENST00000377298 TSPYL6Q8N831 410 aa20.81■□□□□ 0.92
CLSTN1-202ENST00000377298 CABP5Q9NP86 173 aa20.81■□□□□ 0.92
CLSTN1-202ENST00000377298 USP16Q9Y5T5 823 aa20.81■□□□□ 0.92
CLSTN1-202ENST00000377298 SDSP20132 328 aa20.81■□□□□ 0.92
CLSTN1-202ENST00000377298 IARSP41252 1262 aaKnown RBP20.81■□□□□ 0.92
CLSTN1-202ENST00000377298 ZFYVE16Q7Z3T8 1539 aa20.81■□□□□ 0.92
CLSTN1-202ENST00000377298 TBC1D2Q9BYX2 928 aa20.81■□□□□ 0.92
CLSTN1-202ENST00000377298 CCT2P78371 535 aaKnown RBP20.81■□□□□ 0.92
CLSTN1-202ENST00000377298 MTERF4Q7Z6M4 381 aaKnown RBP20.81■□□□□ 0.92
CLSTN1-202ENST00000377298 ORAI2Q96SN7 254 aa20.81■□□□□ 0.92
CLSTN1-202ENST00000377298 ZNF771Q7L3S4 317 aaPredicted RBP20.8■□□□□ 0.92
CLSTN1-202ENST00000377298 ERCC4Q92889 916 aaPredicted RBP20.8■□□□□ 0.92
CLSTN1-202ENST00000377298 TMEM266Q2M3C6 531 aa20.8■□□□□ 0.92
CLSTN1-202ENST00000377298 KAT14Q9H8E8 782 aa20.8■□□□□ 0.92
CLSTN1-202ENST00000377298 EHMT1Q9H9B1 1298 aa20.8■□□□□ 0.92
CLSTN1-202ENST00000377298 HAND2P61296 217 aa20.8■□□□□ 0.92
CLSTN1-202ENST00000377298 DDX21Q9NR30 783 aaKnown RBP eCLIP20.8■□□□□ 0.92
CLSTN1-202ENST00000377298 IL13P35225 146 aa20.79■□□□□ 0.92
CLSTN1-202ENST00000377298 MCM5P33992 734 aa20.79■□□□□ 0.92
CLSTN1-202ENST00000377298 GUCY1B3Q02153 619 aa20.79■□□□□ 0.92
CLSTN1-202ENST00000377298 CYP7A1P22680 504 aa20.78■□□□□ 0.92
CLSTN1-202ENST00000377298 TARBP1Q13395 1621 aaKnown RBP20.78■□□□□ 0.92
CLSTN1-202ENST00000377298 NOM1Q5C9Z4 860 aaKnown RBP20.78■□□□□ 0.92
CLSTN1-202ENST00000377298 TTC41PQ6P2S7 1318 aa20.77■□□□□ 0.92
CLSTN1-202ENST00000377298 MYO1BO43795 1136 aa20.77■□□□□ 0.92
CLSTN1-202ENST00000377298 CCDC178Q5BJE1 867 aa20.77■□□□□ 0.92
CLSTN1-202ENST00000377298 KRT23Q9C075 422 aa20.77■□□□□ 0.92
CLSTN1-202ENST00000377298 ANO10Q9NW15 660 aa20.77■□□□□ 0.92
CLSTN1-202ENST00000377298 PPP1R12BO60237 982 aaPredicted RBP20.77■□□□□ 0.92
CLSTN1-202ENST00000377298 HOXB7P09629 217 aa20.77■□□□□ 0.92
CLSTN1-202ENST00000377298 METAP2P50579 478 aaKnown RBP eCLIP20.77■□□□□ 0.92
CLSTN1-202ENST00000377298 TBC1D32Q96NH3 1257 aa20.77■□□□□ 0.92
CLSTN1-202ENST00000377298 FEZ1Q99689 392 aa20.77■□□□□ 0.92
CLSTN1-202ENST00000377298 IRS4O14654 1257 aaPredicted RBP20.77■□□□□ 0.91
CLSTN1-202ENST00000377298 MCMDC2Q4G0Z9 681 aa20.77■□□□□ 0.91
CLSTN1-202ENST00000377298 CCDC183Q5T5S1 534 aa20.77■□□□□ 0.91
CLSTN1-202ENST00000377298 ORC3Q9UBD5 711 aaPredicted RBP20.77■□□□□ 0.91
CLSTN1-202ENST00000377298 PLEKHG3A1L390 1219 aa20.76■□□□□ 0.91
CLSTN1-202ENST00000377298 ARHGEF10O15013 1369 aa20.76■□□□□ 0.91
CLSTN1-202ENST00000377298 CTAGE5O15320 804 aa20.76■□□□□ 0.91
CLSTN1-202ENST00000377298 KRT24Q2M2I5 525 aa20.76■□□□□ 0.91
CLSTN1-202ENST00000377298 DCTPP1Q9H773 170 aa20.76■□□□□ 0.91
CLSTN1-202ENST00000377298 ARHGEF5Q12774 1597 aa20.76■□□□□ 0.91
CLSTN1-202ENST00000377298 GJB2P29033 226 aa20.76■□□□□ 0.91
CLSTN1-202ENST00000377298 CWF19L2Q2TBE0 894 aaKnown RBP20.76■□□□□ 0.91
CLSTN1-202ENST00000377298 MICU3Q86XE3 530 aa20.76■□□□□ 0.91
CLSTN1-202ENST00000377298 TMTC2Q8N394 836 aa20.76■□□□□ 0.91
CLSTN1-202ENST00000377298 CNNM2Q9H8M5 875 aa20.76■□□□□ 0.91
CLSTN1-202ENST00000377298 CEP85Q6P2H3 762 aa20.75■□□□□ 0.91
CLSTN1-202ENST00000377298 CFAP74Q9C0B2 1584 aa20.75■□□□□ 0.91
CLSTN1-202ENST00000377298 SYCE3A1L190 88 aa20.75■□□□□ 0.91
CLSTN1-202ENST00000377298 PPP4R3BQ5MIZ7 849 aa20.75■□□□□ 0.91
CLSTN1-202ENST00000377298 EIF5P55010 431 aaKnown RBP20.75■□□□□ 0.91
CLSTN1-202ENST00000377298 ANAPC15P60006 121 aa20.75■□□□□ 0.91
CLSTN1-202ENST00000377298 CAMK4Q16566 473 aa20.75■□□□□ 0.91
CLSTN1-202ENST00000377298 ZNF804AQ7Z570 1209 aa20.75■□□□□ 0.91
CLSTN1-202ENST00000377298 STX6O43752 255 aa20.75■□□□□ 0.91
CLSTN1-202ENST00000377298 NAA16Q6N069 864 aaPredicted RBP20.75■□□□□ 0.91
CLSTN1-202ENST00000377298 ZNF790Q6PG37 636 aa20.75■□□□□ 0.91
CLSTN1-202ENST00000377298 ESYT1Q9BSJ8 1104 aa20.74■□□□□ 0.91
CLSTN1-202ENST00000377298 ESR2Q92731 530 aa20.74■□□□□ 0.91
CLSTN1-202ENST00000377298 PA2G4Q9UQ80 394 aaKnown RBP20.74■□□□□ 0.91
CLSTN1-202ENST00000377298 HDAC9Q9UKV0 1011 aa20.73■□□□□ 0.91
CLSTN1-202ENST00000377298 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.73■□□□□ 0.91
CLSTN1-202ENST00000377298 WTAPQ15007 396 aa20.73■□□□□ 0.91
CLSTN1-202ENST00000377298 CFAP100Q494V2 611 aa20.73■□□□□ 0.91
CLSTN1-202ENST00000377298 SLC9C2Q5TAH2 1124 aa20.73■□□□□ 0.91
CLSTN1-202ENST00000377298 SLC4A4Q9Y6R1 1079 aa20.73■□□□□ 0.91
CLSTN1-202ENST00000377298 BAG4O95429 457 aaKnown RBP20.73■□□□□ 0.91
CLSTN1-202ENST00000377298 SSFA2P28290 1259 aa20.73■□□□□ 0.91
CLSTN1-202ENST00000377298 MATR3P43243 847 aaKnown RBP eCLIP20.73■□□□□ 0.91
CLSTN1-202ENST00000377298 WDR78Q5VTH9 848 aa20.73■□□□□ 0.91
CLSTN1-202ENST00000377298 TFCP2L1Q9NZI6 479 aa20.73■□□□□ 0.91
CLSTN1-202ENST00000377298 FBXO3Q9UK99 471 aa20.73■□□□□ 0.91
CLSTN1-202ENST00000377298 ESPNB1AK53 854 aa20.73■□□□□ 0.91
CLSTN1-202ENST00000377298 FILIP1Q7Z7B0 1213 aa20.73■□□□□ 0.91
CLSTN1-202ENST00000377298 LARP6Q9BRS8 491 aaKnown RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms