RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 TAF6LQ9Y6J9 622 aa15.81■□□□□ 0.12
ACTN1-202ENST00000376839 AP5Z1O43299 807 aa15.8■□□□□ 0.12
ACTN1-202ENST00000376839 KDM4AO75164 1064 aa15.8■□□□□ 0.12
ACTN1-202ENST00000376839 ZKSCAN1P17029 563 aaPredicted RBP15.8■□□□□ 0.12
ACTN1-202ENST00000376839 PSME1Q06323 249 aa15.8■□□□□ 0.12
ACTN1-202ENST00000376839 C1orf141Q5JVX7 400 aa15.8■□□□□ 0.12
ACTN1-202ENST00000376839 A0A0D9SFI3 127 aa15.8■□□□□ 0.12
ACTN1-202ENST00000376839 GRM8O00222 908 aa15.8■□□□□ 0.12
ACTN1-202ENST00000376839 PLCB2Q00722 1185 aa15.8■□□□□ 0.12
ACTN1-202ENST00000376839 PIBF1Q8WXW3 757 aa15.8■□□□□ 0.12
ACTN1-202ENST00000376839 MAP4K1Q92918 833 aa15.8■□□□□ 0.12
ACTN1-202ENST00000376839 DYNC1I1O14576 645 aa15.79■□□□□ 0.12
ACTN1-202ENST00000376839 SLC27A2O14975 620 aa15.79■□□□□ 0.12
ACTN1-202ENST00000376839 AIMP1Q12904 312 aaKnown RBP15.79■□□□□ 0.12
ACTN1-202ENST00000376839 ESCO1Q5FWF5 840 aa15.79■□□□□ 0.12
ACTN1-202ENST00000376839 FAM173BQ6P4H8 233 aa15.79■□□□□ 0.12
ACTN1-202ENST00000376839 FERMT3Q86UX7 667 aa15.79■□□□□ 0.12
ACTN1-202ENST00000376839 SIL1Q9H173 461 aa15.79■□□□□ 0.12
ACTN1-202ENST00000376839 HEG1Q9ULI3 1381 aa15.79■□□□□ 0.12
ACTN1-202ENST00000376839 CDC37L1Q7L3B6 337 aa15.79■□□□□ 0.12
ACTN1-202ENST00000376839 KLHDC4Q8TBB5 520 aa15.79■□□□□ 0.12
ACTN1-202ENST00000376839 BOLA2Q9H3K6 86 aa15.79■□□□□ 0.12
ACTN1-202ENST00000376839 TTC6Q86TZ1 520 aa15.78■□□□□ 0.12
ACTN1-202ENST00000376839 KCNH5Q8NCM2 988 aa15.78■□□□□ 0.12
ACTN1-202ENST00000376839 LINS1Q8NG48 757 aa15.78■□□□□ 0.12
ACTN1-202ENST00000376839 FER1L4A9Z1Z3 1794 aa15.78■□□□□ 0.12
ACTN1-202ENST00000376839 NOLC1Q14978 699 aaKnown RBP eCLIP15.78■□□□□ 0.128e-10■□□□□ 9.7
ACTN1-202ENST00000376839 AMOTQ4VCS5 1084 aa15.78■□□□□ 0.12
ACTN1-202ENST00000376839 DNTTIP2Q5QJE6 756 aaKnown RBP15.78■□□□□ 0.12
ACTN1-202ENST00000376839 JARID2Q92833 1246 aaPredicted RBP15.78■□□□□ 0.12
ACTN1-202ENST00000376839 G3BP1Q13283 466 aaKnown RBP eCLIP15.77■□□□□ 0.127e-8■■□□□ 12.9
ACTN1-202ENST00000376839 LARP1BQ659C4 914 aaKnown RBP15.77■□□□□ 0.12
ACTN1-202ENST00000376839 ZMYND15Q9H091 742 aa15.77■□□□□ 0.12
ACTN1-202ENST00000376839 CHMP3Q9Y3E7 222 aa15.77■□□□□ 0.12
ACTN1-202ENST00000376839 ADGRL3Q9HAR2 1447 aa15.77■□□□□ 0.11
ACTN1-202ENST00000376839 NPHP4O75161 1426 aaPredicted RBP15.77■□□□□ 0.11
ACTN1-202ENST00000376839 NCAPD2Q15021 1401 aa15.77■□□□□ 0.11
ACTN1-202ENST00000376839 UTYO14607 1347 aa15.77■□□□□ 0.11
ACTN1-202ENST00000376839 FSD1Q9BTV5 496 aa15.76■□□□□ 0.11
ACTN1-202ENST00000376839 IGKV5-2P06315 115 aa15.76■□□□□ 0.11
ACTN1-202ENST00000376839 ZNF589Q86UQ0 364 aaPredicted RBP15.76■□□□□ 0.11
ACTN1-202ENST00000376839 GCP02774 474 aa15.76■□□□□ 0.11
ACTN1-202ENST00000376839 LIG1P18858 919 aa15.76■□□□□ 0.11
ACTN1-202ENST00000376839 PDIA6Q15084 440 aa15.76■□□□□ 0.11
ACTN1-202ENST00000376839 EDC3Q96F86 508 aaKnown RBP15.76■□□□□ 0.11
ACTN1-202ENST00000376839 SNRKQ9NRH2 765 aa15.76■□□□□ 0.11
ACTN1-202ENST00000376839 CHD2O14647 1828 aaKnown RBP15.75■□□□□ 0.11
ACTN1-202ENST00000376839 HIP1O00291 1037 aa15.75■□□□□ 0.11
ACTN1-202ENST00000376839 ARHGEF25Q86VW2 580 aa15.75■□□□□ 0.11
ACTN1-202ENST00000376839 ANKRD24Q8TF21 1146 aa15.75■□□□□ 0.11
ACTN1-202ENST00000376839 HDAC5Q9UQL6 1122 aa15.75■□□□□ 0.11
ACTN1-202ENST00000376839 MED23Q9ULK4 1368 aa15.75■□□□□ 0.11
ACTN1-202ENST00000376839 PHRF1Q9P1Y6 1649 aaKnown RBP15.75■□□□□ 0.11
ACTN1-202ENST00000376839 BLOC1S2Q6QNY1 142 aa15.75■□□□□ 0.11
ACTN1-202ENST00000376839 ARID3AQ99856 593 aa15.75■□□□□ 0.11
ACTN1-202ENST00000376839 DDX21Q9NR30 783 aaKnown RBP eCLIP15.75■□□□□ 0.11
ACTN1-202ENST00000376839 PSMA5P28066 241 aa15.74■□□□□ 0.11
ACTN1-202ENST00000376839 KRT85P78386 507 aa15.74■□□□□ 0.11
ACTN1-202ENST00000376839 TOB2Q14106 344 aaPredicted RBP15.74■□□□□ 0.11
ACTN1-202ENST00000376839 MYRIPQ8NFW9 859 aa15.74■□□□□ 0.11
ACTN1-202ENST00000376839 TSC1Q92574 1164 aa15.74■□□□□ 0.11
ACTN1-202ENST00000376839 MAP7D2Q96T17 732 aa15.74■□□□□ 0.11
ACTN1-202ENST00000376839 RPS6KB1P23443 525 aa15.74■□□□□ 0.11
ACTN1-202ENST00000376839 CAMK4Q16566 473 aa15.74■□□□□ 0.11
ACTN1-202ENST00000376839 EPHA10Q5JZY3 1008 aa15.74■□□□□ 0.11
ACTN1-202ENST00000376839 KCNF1Q9H3M0 494 aa15.74■□□□□ 0.11
ACTN1-202ENST00000376839 AXIN2Q9Y2T1 843 aa15.74■□□□□ 0.11
ACTN1-202ENST00000376839 OVOS2A0A0G2JMS6 1433 aa15.74■□□□□ 0.11
ACTN1-202ENST00000376839 DDX58O95786 925 aaKnown RBP15.73■□□□□ 0.11
ACTN1-202ENST00000376839 STK3Q13188 491 aa15.73■□□□□ 0.11
ACTN1-202ENST00000376839 SLC39A6Q13433 755 aa15.73■□□□□ 0.11
ACTN1-202ENST00000376839 SPTLC3Q9NUV7 552 aa15.73■□□□□ 0.11
ACTN1-202ENST00000376839 CCDC192P0DO97 292 aa15.73■□□□□ 0.11
ACTN1-202ENST00000376839 LARP1Q6PKG0 1096 aaKnown RBP15.73■□□□□ 0.11
ACTN1-202ENST00000376839 RIC3Q7Z5B4 369 aa15.73■□□□□ 0.11
ACTN1-202ENST00000376839 SPC24Q8NBT2 197 aa15.73■□□□□ 0.11
ACTN1-202ENST00000376839 MYL6BP14649 208 aa15.72■□□□□ 0.11
ACTN1-202ENST00000376839 LMOD2Q6P5Q4 547 aa15.72■□□□□ 0.11
ACTN1-202ENST00000376839 TFIP11Q9UBB9 837 aaKnown RBP15.72■□□□□ 0.11
ACTN1-202ENST00000376839 PYCARDQ9ULZ3 195 aa15.72■□□□□ 0.11
ACTN1-202ENST00000376839 RNF20Q5VTR2 975 aa15.72■□□□□ 0.11
ACTN1-202ENST00000376839 ORAI2Q96SN7 254 aa15.72■□□□□ 0.11
ACTN1-202ENST00000376839 NUP62CLQ9H1M0 184 aa15.72■□□□□ 0.11
ACTN1-202ENST00000376839 SIPA1L3O60292 1781 aaPredicted RBP15.72■□□□□ 0.11
ACTN1-202ENST00000376839 CHGBP05060 677 aa15.72■□□□□ 0.11
ACTN1-202ENST00000376839 NDUFB9Q9Y6M9 179 aa15.72■□□□□ 0.11
ACTN1-202ENST00000376839 COL15A1P39059 1388 aa15.71■□□□□ 0.11
ACTN1-202ENST00000376839 ELP1O95163 1332 aa15.71■□□□□ 0.11
ACTN1-202ENST00000376839 NEURL1BA8MQ27 555 aa15.71■□□□□ 0.11
ACTN1-202ENST00000376839 MAP3K11Q16584 847 aa15.71■□□□□ 0.11
ACTN1-202ENST00000376839 MRVI1Q9Y6F6 885 aa15.71■□□□□ 0.11
ACTN1-202ENST00000376839 JCADQ9P266 1359 aa15.71■□□□□ 0.1
ACTN1-202ENST00000376839 TAF5LO75529 589 aa15.71■□□□□ 0.1
ACTN1-202ENST00000376839 PDCP20941 246 aa15.71■□□□□ 0.1
ACTN1-202ENST00000376839 TYRO3Q06418 890 aa15.71■□□□□ 0.1
ACTN1-202ENST00000376839 CKAP2LQ8IYA6 745 aa15.71■□□□□ 0.1
ACTN1-202ENST00000376839 DACT1Q9NYF0 836 aa15.71■□□□□ 0.1
ACTN1-202ENST00000376839 JAK2O60674 1132 aa15.7■□□□□ 0.1
ACTN1-202ENST00000376839 ANKRD1Q15327 319 aa15.7■□□□□ 0.1
ACTN1-202ENST00000376839 KLHL34Q8N239 644 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms