RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 WDR33Q9C0J8 1336 aaKnown RBP17.44■□□□□ 0.38
CLCN6-205ENST00000376492 HTATSF1O43719 755 aaKnown RBP17.43■□□□□ 0.38
CLCN6-205ENST00000376492 SCNN1DP51172 638 aa17.43■□□□□ 0.38
CLCN6-205ENST00000376492 EIF6P56537 245 aaKnown RBP17.43■□□□□ 0.38
CLCN6-205ENST00000376492 TAF7Q15545 349 aaPredicted RBP17.43■□□□□ 0.38
CLCN6-205ENST00000376492 TTLL7Q6ZT98 887 aa17.43■□□□□ 0.38
CLCN6-205ENST00000376492 DDX21Q9NR30 783 aaKnown RBP eCLIP17.43■□□□□ 0.38
CLCN6-205ENST00000376492 UBN2Q6ZU65 1347 aa17.43■□□□□ 0.38
CLCN6-205ENST00000376492 LAMB4A4D0S4 1761 aa17.43■□□□□ 0.38
CLCN6-205ENST00000376492 GPTP24298 496 aa17.42■□□□□ 0.38
CLCN6-205ENST00000376492 EPS15P42566 896 aa17.42■□□□□ 0.38
CLCN6-205ENST00000376492 RPGRQ92834 1020 aaKnown RBP17.42■□□□□ 0.38
CLCN6-205ENST00000376492 NYXQ9GZU5 481 aa17.42■□□□□ 0.38
CLCN6-205ENST00000376492 MAP3K15Q6ZN16 1313 aa17.42■□□□□ 0.38
CLCN6-205ENST00000376492 RIC1Q4ADV7 1423 aa17.41■□□□□ 0.38
CLCN6-205ENST00000376492 TCERG1O14776 1098 aaKnown RBP17.41■□□□□ 0.38
CLCN6-205ENST00000376492 LMOD1P29536 600 aaPredicted RBP17.41■□□□□ 0.38
CLCN6-205ENST00000376492 C3orf67Q6ZVT6 689 aa17.41■□□□□ 0.38
CLCN6-205ENST00000376492 ZBTB3Q9H5J0 574 aa17.41■□□□□ 0.38
CLCN6-205ENST00000376492 RRP7AQ9Y3A4 280 aaKnown RBP17.41■□□□□ 0.38
CLCN6-205ENST00000376492 ERVV-1B6SEH8 477 aa17.4■□□□□ 0.38
CLCN6-205ENST00000376492 TRAF5O00463 557 aa17.4■□□□□ 0.38
CLCN6-205ENST00000376492 HOXA10P31260 410 aaPredicted RBP17.4■□□□□ 0.38
CLCN6-205ENST00000376492 MAP2K1Q02750 393 aaPredicted RBP17.4■□□□□ 0.38
CLCN6-205ENST00000376492 SUSD4Q5VX71 490 aa17.4■□□□□ 0.38
CLCN6-205ENST00000376492 CC2D2BQ6DHV5 1058 aa17.4■□□□□ 0.38
CLCN6-205ENST00000376492 KIF6Q6ZMV9 814 aa17.4■□□□□ 0.38
CLCN6-205ENST00000376492 PAXIP1Q6ZW49 1069 aaPredicted RBP17.4■□□□□ 0.38
CLCN6-205ENST00000376492 LARGE2Q8N3Y3 721 aa17.4■□□□□ 0.38
CLCN6-205ENST00000376492 ABHD8Q96I13 439 aa17.4■□□□□ 0.38
CLCN6-205ENST00000376492 PPEF1O14829 653 aaPredicted RBP17.39■□□□□ 0.37
CLCN6-205ENST00000376492 MYL6BP14649 208 aa17.39■□□□□ 0.37
CLCN6-205ENST00000376492 GRM1Q13255 1194 aa17.39■□□□□ 0.37
CLCN6-205ENST00000376492 THUMPD2Q9BTF0 503 aaKnown RBP17.39■□□□□ 0.37
CLCN6-205ENST00000376492 THSD7BQ9C0I4 1608 aa17.39■□□□□ 0.37
CLCN6-205ENST00000376492 IBTKQ9P2D0 1353 aaPredicted RBP17.39■□□□□ 0.37
CLCN6-205ENST00000376492 EIF4A1P60842 406 aaKnown RBP17.38■□□□□ 0.37
CLCN6-205ENST00000376492 CYP4F22Q6NT55 531 aa17.38■□□□□ 0.37
CLCN6-205ENST00000376492 CAPNS2Q96L46 248 aa17.38■□□□□ 0.37
CLCN6-205ENST00000376492 KDM3BQ7LBC6 1761 aa17.38■□□□□ 0.37
CLCN6-205ENST00000376492 NTSR2O95665 410 aa17.37■□□□□ 0.37
CLCN6-205ENST00000376492 CST9Q5W186 159 aa17.37■□□□□ 0.37
CLCN6-205ENST00000376492 NIM1KQ8IY84 436 aa17.37■□□□□ 0.37
CLCN6-205ENST00000376492 RBM17Q96I25 401 aaKnown RBP17.37■□□□□ 0.37
CLCN6-205ENST00000376492 CRAMP1Q96RY5 1269 aa17.37■□□□□ 0.37
CLCN6-205ENST00000376492 PPIP5K2O43314 1243 aa17.36■□□□□ 0.37
CLCN6-205ENST00000376492 AOC3Q16853 763 aa17.36■□□□□ 0.37
CLCN6-205ENST00000376492 FAM161AQ3B820 660 aa17.36■□□□□ 0.37
CLCN6-205ENST00000376492 ZNF34Q8IZ26 560 aa17.36■□□□□ 0.37
CLCN6-205ENST00000376492 PNISRQ8TF01 805 aaKnown RBP17.36■□□□□ 0.37
CLCN6-205ENST00000376492 NUP98P52948 1817 aa17.35■□□□□ 0.37
CLCN6-205ENST00000376492 USP50Q70EL3 339 aaPredicted RBP17.35■□□□□ 0.37
CLCN6-205ENST00000376492 GPR101Q96P66 508 aaPredicted RBP17.35■□□□□ 0.37
CLCN6-205ENST00000376492 TSKSQ9UJT2 592 aa17.35■□□□□ 0.37
CLCN6-205ENST00000376492 AOC2O75106 756 aa17.34■□□□□ 0.37
CLCN6-205ENST00000376492 GRIPAP1Q4V328 841 aa17.34■□□□□ 0.37
CLCN6-205ENST00000376492 TLL2Q9Y6L7 1015 aa17.34■□□□□ 0.37
CLCN6-205ENST00000376492 ECE1P42892 770 aa17.33■□□□□ 0.36
CLCN6-205ENST00000376492 DDX10Q13206 875 aaKnown RBP17.33■□□□□ 0.36
CLCN6-205ENST00000376492 GIGYF2Q6Y7W6 1299 aaKnown RBP17.33■□□□□ 0.36
CLCN6-205ENST00000376492 PLEKHF1Q96S99 279 aa17.33■□□□□ 0.36
CLCN6-205ENST00000376492 GPRC5DQ9NZD1 345 aa17.33■□□□□ 0.36
CLCN6-205ENST00000376492 ABCC4O15439 1325 aa17.32■□□□□ 0.36
CLCN6-205ENST00000376492 BEGAINQ9BUH8 593 aa17.32■□□□□ 0.36
CLCN6-205ENST00000376492 ADARB2Q9NS39 739 aaKnown RBP17.32■□□□□ 0.36
CLCN6-205ENST00000376492 ATP6V0A2Q9Y487 856 aa17.32■□□□□ 0.36
CLCN6-205ENST00000376492 CCDC85CA6NKD9 419 aa17.31■□□□□ 0.36
CLCN6-205ENST00000376492 GMPSP49915 693 aaPredicted RBP17.31■□□□□ 0.36
CLCN6-205ENST00000376492 CXCL9Q07325 125 aa17.31■□□□□ 0.36
CLCN6-205ENST00000376492 NFE2L2Q16236 605 aa17.31■□□□□ 0.36
CLCN6-205ENST00000376492 PROSER3Q2NL68 480 aa17.31■□□□□ 0.36
CLCN6-205ENST00000376492 LRP10Q7Z4F1 713 aa17.31■□□□□ 0.36
CLCN6-205ENST00000376492 GLIS2Q9BZE0 524 aaPredicted RBP17.31■□□□□ 0.36
CLCN6-205ENST00000376492 DLG5Q8TDM6 1919 aa17.3■□□□□ 0.36
CLCN6-205ENST00000376492 CELF2O95319 508 aaKnown RBP17.3■□□□□ 0.36
CLCN6-205ENST00000376492 ANXA1P04083 346 aa17.3■□□□□ 0.36
CLCN6-205ENST00000376492 NEFMP07197 916 aa17.3■□□□□ 0.36
CLCN6-205ENST00000376492 PARP10Q53GL7 1025 aa17.3■□□□□ 0.36
CLCN6-205ENST00000376492 PPP1R42Q7Z4L9 355 aa17.3■□□□□ 0.36
CLCN6-205ENST00000376492 NLRP3Q96P20 1036 aa17.3■□□□□ 0.36
CLCN6-205ENST00000376492 ERBB4Q15303 1308 aa17.29■□□□□ 0.36
CLCN6-205ENST00000376492 PDIA6Q15084 440 aa17.29■□□□□ 0.36
CLCN6-205ENST00000376492 SAPCD2Q86UD0 394 aa17.29■□□□□ 0.36
CLCN6-205ENST00000376492 UTP14AQ9BVJ6 771 aaKnown RBP17.29■□□□□ 0.36
CLCN6-205ENST00000376492 RTFDC1Q9BY42 306 aaPredicted RBP17.29■□□□□ 0.36
CLCN6-205ENST00000376492 ZNRF3Q9ULT6 936 aa17.29■□□□□ 0.36
CLCN6-205ENST00000376492 RAD17O75943 681 aa17.28■□□□□ 0.36
CLCN6-205ENST00000376492 EIF2S2P20042 333 aaKnown RBP17.28■□□□□ 0.36
CLCN6-205ENST00000376492 TMX4Q9H1E5 349 aaPredicted RBP17.28■□□□□ 0.36
CLCN6-205ENST00000376492 TRPM7Q96QT4 1865 aa17.27■□□□□ 0.36
CLCN6-205ENST00000376492 SHTN1A0MZ66 631 aa17.27■□□□□ 0.36
CLCN6-205ENST00000376492 SLC34A2O95436 690 aa17.27■□□□□ 0.36
CLCN6-205ENST00000376492 HCLS1P14317 486 aaPredicted RBP17.27■□□□□ 0.36
CLCN6-205ENST00000376492 MAP2K2P36507 400 aa17.27■□□□□ 0.36
CLCN6-205ENST00000376492 HIRAP54198 1017 aaPredicted RBP17.27■□□□□ 0.36
CLCN6-205ENST00000376492 SLC10A5Q5PT55 438 aa17.27■□□□□ 0.36
CLCN6-205ENST00000376492 DPP8Q6V1X1 898 aaPredicted RBP17.27■□□□□ 0.36
CLCN6-205ENST00000376492 TRPM4Q8TD43 1214 aa17.27■□□□□ 0.36
CLCN6-205ENST00000376492 VPS33BQ9H267 617 aa17.27■□□□□ 0.36
CLCN6-205ENST00000376492 ZNF408Q9H9D4 720 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms