RNA–Protein interactions for RNA: ENST00000376324.7

CHRDL2-202, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,665 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-202ENST00000376324 ANO8Q9HCE9 1232 aaPredicted RBP18.54■□□□□ 0.56
CHRDL2-202ENST00000376324 NIP7Q9Y221 180 aaKnown RBP eCLIP18.54■□□□□ 0.56
CHRDL2-202ENST00000376324 USP42Q9H9J4 1324 aaKnown RBP18.53■□□□□ 0.56
CHRDL2-202ENST00000376324 ZNF34Q8IZ26 560 aa18.53■□□□□ 0.56
CHRDL2-202ENST00000376324 STK32BQ9NY57 414 aa18.53■□□□□ 0.56
CHRDL2-202ENST00000376324 UBN2Q6ZU65 1347 aa18.52■□□□□ 0.56
CHRDL2-202ENST00000376324 TRIM28Q13263 835 aaKnown RBP18.52■□□□□ 0.56
CHRDL2-202ENST00000376324 CLEC4GQ6UXB4 293 aa18.52■□□□□ 0.56
CHRDL2-202ENST00000376324 UPF1Q92900 1129 aaKnown RBP eCLIP18.52■□□□□ 0.56
CHRDL2-202ENST00000376324 SUCLG2Q96I99 432 aa18.52■□□□□ 0.56
CHRDL2-202ENST00000376324 TBC1D9BQ66K14 1250 aa18.51■□□□□ 0.55
CHRDL2-202ENST00000376324 IGHDP01880 384 aa18.5■□□□□ 0.55
CHRDL2-202ENST00000376324 SLC15A2Q16348 729 aa18.5■□□□□ 0.55
CHRDL2-202ENST00000376324 COL23A1Q86Y22 540 aaPredicted RBP18.5■□□□□ 0.55
CHRDL2-202ENST00000376324 FAM89AQ96GI7 184 aa18.5■□□□□ 0.55
CHRDL2-202ENST00000376324 UTYO14607 1347 aa18.5■□□□□ 0.55
CHRDL2-202ENST00000376324 H7C1W4 665 aa18.5■□□□□ 0.55
CHRDL2-202ENST00000376324 SUSD4Q5VX71 490 aa18.5■□□□□ 0.55
CHRDL2-202ENST00000376324 CEP85Q6P2H3 762 aa18.5■□□□□ 0.55
CHRDL2-202ENST00000376324 TRMT112Q9UI30 125 aaKnown RBP18.5■□□□□ 0.55
CHRDL2-202ENST00000376324 SYNE4Q8N205 404 aa18.49■□□□□ 0.55
CHRDL2-202ENST00000376324 RWDD1Q9H446 243 aaPredicted RBP18.49■□□□□ 0.55
CHRDL2-202ENST00000376324 PNPLA7Q6ZV29 1317 aa18.49■□□□□ 0.55
CHRDL2-202ENST00000376324 PCCAP05165 728 aaPredicted RBP18.48■□□□□ 0.55
CHRDL2-202ENST00000376324 CASP7P55210 303 aa18.48■□□□□ 0.55
CHRDL2-202ENST00000376324 PARP10Q53GL7 1025 aa18.48■□□□□ 0.55
CHRDL2-202ENST00000376324 SIRT2Q8IXJ6 389 aa18.48■□□□□ 0.55
CHRDL2-202ENST00000376324 ANKRD44Q8N8A2 993 aa18.48■□□□□ 0.55
CHRDL2-202ENST00000376324 FLAD1Q8NFF5 587 aa18.48■□□□□ 0.55
CHRDL2-202ENST00000376324 HDAC5Q9UQL6 1122 aa18.48■□□□□ 0.55
CHRDL2-202ENST00000376324 IBTKQ9P2D0 1353 aaPredicted RBP18.48■□□□□ 0.55
CHRDL2-202ENST00000376324 GYS1P13807 737 aa18.47■□□□□ 0.55
CHRDL2-202ENST00000376324 ILDR2Q71H61 639 aa18.47■□□□□ 0.55
CHRDL2-202ENST00000376324 RPAP2Q8IXW5 612 aaPredicted RBP18.47■□□□□ 0.55
CHRDL2-202ENST00000376324 ZBTB38Q8NAP3 1195 aaPredicted RBP18.47■□□□□ 0.55
CHRDL2-202ENST00000376324 KAZALD1Q96I82 304 aa18.47■□□□□ 0.55
CHRDL2-202ENST00000376324 SETDB2Q96T68 719 aa18.47■□□□□ 0.55
CHRDL2-202ENST00000376324 UTP14AQ9BVJ6 771 aaKnown RBP18.47■□□□□ 0.55
CHRDL2-202ENST00000376324 BICC1Q9H694 974 aaKnown RBP18.47■□□□□ 0.55
CHRDL2-202ENST00000376324 EPHA10Q5JZY3 1008 aa18.47■□□□□ 0.55
CHRDL2-202ENST00000376324 PPP1R42Q7Z4L9 355 aa18.47■□□□□ 0.55
CHRDL2-202ENST00000376324 PNMA6EA0A0J9YXQ4 647 aa18.46■□□□□ 0.55
CHRDL2-202ENST00000376324 RGL2O15211 777 aa18.46■□□□□ 0.55
CHRDL2-202ENST00000376324 ATP8B2P98198 1209 aa18.46■□□□□ 0.55
CHRDL2-202ENST00000376324 HDAC1Q13547 482 aaPredicted RBP18.45■□□□□ 0.54
CHRDL2-202ENST00000376324 NUTM1Q86Y26 1132 aa18.45■□□□□ 0.54
CHRDL2-202ENST00000376324 NTSR2O95665 410 aa18.44■□□□□ 0.54
CHRDL2-202ENST00000376324 NFIXQ14938 502 aa18.44■□□□□ 0.54
CHRDL2-202ENST00000376324 CHMP3Q9Y3E7 222 aa18.44■□□□□ 0.54
CHRDL2-202ENST00000376324 SH3TC1Q8TE82 1336 aa18.44■□□□□ 0.54
CHRDL2-202ENST00000376324 IRS4O14654 1257 aaPredicted RBP18.44■□□□□ 0.54
CHRDL2-202ENST00000376324 SRGAP3O43295 1099 aa18.44■□□□□ 0.54
CHRDL2-202ENST00000376324 HMMRO75330 724 aa18.44■□□□□ 0.54
CHRDL2-202ENST00000376324 GTF2E1P29083 439 aaPredicted RBP18.44■□□□□ 0.54
CHRDL2-202ENST00000376324 CENPQQ7L2Z9 268 aaPredicted RBP18.44■□□□□ 0.54
CHRDL2-202ENST00000376324 KDM2BQ8NHM5 1336 aa18.43■□□□□ 0.54
CHRDL2-202ENST00000376324 HCLS1P14317 486 aaPredicted RBP18.43■□□□□ 0.54
CHRDL2-202ENST00000376324 MSL1Q68DK7 614 aa18.43■□□□□ 0.54
CHRDL2-202ENST00000376324 NBPF5PQ86XG9 351 aaPredicted RBP18.43■□□□□ 0.54
CHRDL2-202ENST00000376324 CDHR2Q9BYE9 1310 aa18.42■□□□□ 0.54
CHRDL2-202ENST00000376324 NPHP1O15259 732 aa18.42■□□□□ 0.54
CHRDL2-202ENST00000376324 FOXO4P98177 505 aa18.42■□□□□ 0.54
CHRDL2-202ENST00000376324 LMBR1LQ6UX01 489 aa18.42■□□□□ 0.54
CHRDL2-202ENST00000376324 CCDC24Q8N4L8 307 aa18.42■□□□□ 0.54
CHRDL2-202ENST00000376324 CCDC85AQ96PX6 553 aaPredicted RBP18.42■□□□□ 0.54
CHRDL2-202ENST00000376324 ERFEQ4G0M1 354 aa18.41■□□□□ 0.54
CHRDL2-202ENST00000376324 COL24A1Q17RW2 1714 aa18.41■□□□□ 0.54
CHRDL2-202ENST00000376324 PDGFDQ9GZP0 370 aaPredicted RBP18.41■□□□□ 0.54
CHRDL2-202ENST00000376324 NYXQ9GZU5 481 aa18.41■□□□□ 0.54
CHRDL2-202ENST00000376324 QSER1Q2KHR3 1735 aa18.4■□□□□ 0.54
CHRDL2-202ENST00000376324 CARMIL3Q8ND23 1372 aa18.4■□□□□ 0.54
CHRDL2-202ENST00000376324 TM4SF1P30408 202 aa18.4■□□□□ 0.54
CHRDL2-202ENST00000376324 NLGN1Q8N2Q7 840 aa18.4■□□□□ 0.54
CHRDL2-202ENST00000376324 APBB1O00213 710 aa18.39■□□□□ 0.53
CHRDL2-202ENST00000376324 PDE8AO60658 829 aa18.39■□□□□ 0.53
CHRDL2-202ENST00000376324 MTX1Q13505 466 aa18.39■□□□□ 0.53
CHRDL2-202ENST00000376324 POLA2Q14181 598 aa18.39■□□□□ 0.53
CHRDL2-202ENST00000376324 RABL6Q3YEC7 729 aaPredicted RBP18.39■□□□□ 0.53
CHRDL2-202ENST00000376324 TPTE2Q6XPS3 522 aa18.39■□□□□ 0.53
CHRDL2-202ENST00000376324 SSH3Q8TE77 659 aa18.39■□□□□ 0.53
CHRDL2-202ENST00000376324 PLA2G12BQ9BX93 195 aa18.39■□□□□ 0.53
CHRDL2-202ENST00000376324 BCL11AQ9H165 835 aa18.39■□□□□ 0.53
CHRDL2-202ENST00000376324 SERPINB2P05120 415 aa18.38■□□□□ 0.53
CHRDL2-202ENST00000376324 DDR1Q08345 913 aa18.38■□□□□ 0.53
CHRDL2-202ENST00000376324 PA2G4Q9UQ80 394 aaKnown RBP18.38■□□□□ 0.53
CHRDL2-202ENST00000376324 EXOC6BQ9Y2D4 811 aa18.38■□□□□ 0.53
CHRDL2-202ENST00000376324 MYH3P11055 1940 aa18.38■□□□□ 0.53
CHRDL2-202ENST00000376324 CTSWP56202 376 aa18.38■□□□□ 0.53
CHRDL2-202ENST00000376324 DDX60Q8IY21 1712 aaKnown RBP18.38■□□□□ 0.53
CHRDL2-202ENST00000376324 DCTPP1Q9H773 170 aa18.38■□□□□ 0.53
CHRDL2-202ENST00000376324 ABCC12Q96J65 1359 aa18.37■□□□□ 0.53
CHRDL2-202ENST00000376324 SURF6O75683 361 aaKnown RBP18.37■□□□□ 0.53
CHRDL2-202ENST00000376324 SKAP1Q86WV1 359 aa18.37■□□□□ 0.53
CHRDL2-202ENST00000376324 CNBD1Q8NA66 436 aa18.37■□□□□ 0.53
CHRDL2-202ENST00000376324 KLHDC4Q8TBB5 520 aa18.37■□□□□ 0.53
CHRDL2-202ENST00000376324 POLRMTO00411 1230 aaKnown RBP18.36■□□□□ 0.53
CHRDL2-202ENST00000376324 MMP10P09238 476 aa18.36■□□□□ 0.53
CHRDL2-202ENST00000376324 FAM161AQ3B820 660 aa18.36■□□□□ 0.53
CHRDL2-202ENST00000376324 SMC5Q8IY18 1101 aa18.36■□□□□ 0.53
CHRDL2-202ENST00000376324 GCC1Q96CN9 775 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms