RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 SPATA31E1Q6ZUB1 1445 aa10.12□□□□□ -0.79
SHROOM4-202ENST00000376020 TMX3Q96JJ7 454 aa10.12□□□□□ -0.79
SHROOM4-202ENST00000376020 HMOX1P09601 288 aa10.12□□□□□ -0.79
SHROOM4-202ENST00000376020 VAV2P52735 878 aa10.12□□□□□ -0.79
SHROOM4-202ENST00000376020 TYRO3Q06418 890 aa10.12□□□□□ -0.79
SHROOM4-202ENST00000376020 PPFIA1Q13136 1202 aa10.12□□□□□ -0.79
SHROOM4-202ENST00000376020 GGNBP2Q9H3C7 697 aa10.12□□□□□ -0.79
SHROOM4-202ENST00000376020 NEUROD6Q96NK8 337 aa10.11□□□□□ -0.79
SHROOM4-202ENST00000376020 ADAMTS12P58397 1594 aa10.11□□□□□ -0.79
SHROOM4-202ENST00000376020 GNAT3A8MTJ3 354 aa10.11□□□□□ -0.79
SHROOM4-202ENST00000376020 F13A1P00488 732 aa10.11□□□□□ -0.79
SHROOM4-202ENST00000376020 MRPS27Q92552 414 aaKnown RBP10.11□□□□□ -0.79
SHROOM4-202ENST00000376020 TRIM21P19474 475 aaKnown RBP10.11□□□□□ -0.79
SHROOM4-202ENST00000376020 GNG11P61952 73 aa10.11□□□□□ -0.79
SHROOM4-202ENST00000376020 CWC27Q6UX04 472 aaKnown RBP10.11□□□□□ -0.79
SHROOM4-202ENST00000376020 NDC80O14777 642 aa10.11□□□□□ -0.79
SHROOM4-202ENST00000376020 IFFO1Q0D2I5 559 aa10.11□□□□□ -0.79
SHROOM4-202ENST00000376020 NUP88Q99567 741 aaPredicted RBP10.11□□□□□ -0.79
SHROOM4-202ENST00000376020 SH2D4BQ5SQS7 431 aa10.11□□□□□ -0.79
SHROOM4-202ENST00000376020 KCNH5Q8NCM2 988 aa10.11□□□□□ -0.79
SHROOM4-202ENST00000376020 JAKMIP2Q96AA8 810 aa10.11□□□□□ -0.79
SHROOM4-202ENST00000376020 CPSF2Q9P2I0 782 aaKnown RBP10.11□□□□□ -0.79
SHROOM4-202ENST00000376020 CCDC178Q5BJE1 867 aa10.11□□□□□ -0.79
SHROOM4-202ENST00000376020 RASAL2Q9UJF2 1139 aa10.11□□□□□ -0.79
SHROOM4-202ENST00000376020 BRD3Q15059 726 aa10.11□□□□□ -0.79
SHROOM4-202ENST00000376020 KIF6Q6ZMV9 814 aa10.11□□□□□ -0.79
SHROOM4-202ENST00000376020 CNNM3Q8NE01 707 aa10.11□□□□□ -0.79
SHROOM4-202ENST00000376020 KDM5BQ9UGL1 1544 aa10.11□□□□□ -0.79
SHROOM4-202ENST00000376020 ASXL2Q76L83 1435 aa10.1□□□□□ -0.79
SHROOM4-202ENST00000376020 A0A087WZG4 1122 aa10.1□□□□□ -0.79
SHROOM4-202ENST00000376020 CCDC184Q52MB2 194 aa10.1□□□□□ -0.79
SHROOM4-202ENST00000376020 NUTM2DQ5VT03 806 aaPredicted RBP10.1□□□□□ -0.79
SHROOM4-202ENST00000376020 NUTM2AQ8IVF1 878 aaPredicted RBP10.1□□□□□ -0.79
SHROOM4-202ENST00000376020 NAP1L3Q99457 506 aaPredicted RBP10.1□□□□□ -0.79
SHROOM4-202ENST00000376020 SLC12A5Q9H2X9 1139 aa10.1□□□□□ -0.79
SHROOM4-202ENST00000376020 CEP126Q9P2H0 1117 aa10.1□□□□□ -0.79
SHROOM4-202ENST00000376020 DBF4Q9UBU7 674 aaPredicted RBP10.1□□□□□ -0.79
SHROOM4-202ENST00000376020 C10orf67Q8IYJ2 551 aa10.1□□□□□ -0.79
SHROOM4-202ENST00000376020 ANKRD18BA2A2Z9 1011 aa10.1□□□□□ -0.79
SHROOM4-202ENST00000376020 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.1□□□□□ -0.79
SHROOM4-202ENST00000376020 C20orf194Q5TEA3 1177 aa10.1□□□□□ -0.79
SHROOM4-202ENST00000376020 GBP6Q6ZN66 633 aa10.1□□□□□ -0.79
SHROOM4-202ENST00000376020 ARMC9Q7Z3E5 817 aa10.1□□□□□ -0.79
SHROOM4-202ENST00000376020 FSIP1Q8NA03 581 aa10.1□□□□□ -0.79
SHROOM4-202ENST00000376020 LMBR1Q8WVP7 490 aa10.1□□□□□ -0.79
SHROOM4-202ENST00000376020 TTF2Q9UNY4 1162 aaKnown RBP10.1□□□□□ -0.79
SHROOM4-202ENST00000376020 ARHGAP6O43182 974 aa10.09□□□□□ -0.79
SHROOM4-202ENST00000376020 KIF5BP33176 963 aa10.09□□□□□ -0.79
SHROOM4-202ENST00000376020 STAMBPO95630 424 aa10.09□□□□□ -0.79
SHROOM4-202ENST00000376020 PRIM1P49642 420 aaKnown RBP10.09□□□□□ -0.79
SHROOM4-202ENST00000376020 HDAC9Q9UKV0 1011 aa10.09□□□□□ -0.79
SHROOM4-202ENST00000376020 FAM76AQ8TAV0 307 aa10.09□□□□□ -0.79
SHROOM4-202ENST00000376020 SELENOOQ9BVL4 669 aa10.09□□□□□ -0.79
SHROOM4-202ENST00000376020 CCDC9Q9Y3X0 531 aaKnown RBP10.09□□□□□ -0.79
SHROOM4-202ENST00000376020 TSKSQ9UJT2 592 aa10.09□□□□□ -0.79
SHROOM4-202ENST00000376020 PSME1Q06323 249 aa10.09□□□□□ -0.79
SHROOM4-202ENST00000376020 SLMAPQ14BN4 828 aa10.09□□□□□ -0.79
SHROOM4-202ENST00000376020 CCDC155Q8N6L0 562 aa10.09□□□□□ -0.79
SHROOM4-202ENST00000376020 GPR161Q8N6U8 529 aaKnown RBP10.09□□□□□ -0.79
SHROOM4-202ENST00000376020 ATP5DP30049 168 aa10.09□□□□□ -0.79
SHROOM4-202ENST00000376020 UBASH3AP57075 661 aa10.09□□□□□ -0.79
SHROOM4-202ENST00000376020 CENPHQ9H3R5 247 aa10.09□□□□□ -0.79
SHROOM4-202ENST00000376020 CNNM2Q9H8M5 875 aa10.09□□□□□ -0.79
SHROOM4-202ENST00000376020 PPP2R5BQ15173 497 aa10.09□□□□□ -0.79
SHROOM4-202ENST00000376020 TTC12Q9H892 705 aaPredicted RBP10.09□□□□□ -0.79
SHROOM4-202ENST00000376020 ZHX1Q9UKY1 873 aaPredicted RBP10.09□□□□□ -0.79
SHROOM4-202ENST00000376020 POGZQ7Z3K3 1410 aa10.08□□□□□ -0.8
SHROOM4-202ENST00000376020 LIG1P18858 919 aa10.08□□□□□ -0.8
SHROOM4-202ENST00000376020 TMEM266Q2M3C6 531 aa10.08□□□□□ -0.8
SHROOM4-202ENST00000376020 STXBP4Q6ZWJ1 553 aa10.08□□□□□ -0.8
SHROOM4-202ENST00000376020 TMC6Q7Z403 805 aa10.08□□□□□ -0.8
SHROOM4-202ENST00000376020 PATL2C9JE40 543 aaKnown RBP10.08□□□□□ -0.8
SHROOM4-202ENST00000376020 SETD1BQ9UPS6 1966 aaKnown RBP10.08□□□□□ -0.8
SHROOM4-202ENST00000376020 TULP1O00294 542 aaPredicted RBP10.08□□□□□ -0.8
SHROOM4-202ENST00000376020 GJB2P29033 226 aa10.08□□□□□ -0.8
SHROOM4-202ENST00000376020 MSL1Q68DK7 614 aa10.08□□□□□ -0.8
SHROOM4-202ENST00000376020 ESYT1Q9BSJ8 1104 aa10.08□□□□□ -0.8
SHROOM4-202ENST00000376020 FAM160A1Q05DH4 1040 aa10.08□□□□□ -0.8
SHROOM4-202ENST00000376020 DMTNQ08495 405 aa10.08□□□□□ -0.8
SHROOM4-202ENST00000376020 ZBTB40Q9NUA8 1239 aa10.08□□□□□ -0.8
SHROOM4-202ENST00000376020 TAF7Q15545 349 aaPredicted RBP10.08□□□□□ -0.8
SHROOM4-202ENST00000376020 TRAF1Q13077 416 aa10.08□□□□□ -0.8
SHROOM4-202ENST00000376020 CFAP58Q5T655 872 aa10.08□□□□□ -0.8
SHROOM4-202ENST00000376020 USP37Q86T82 979 aa10.08□□□□□ -0.8
SHROOM4-202ENST00000376020 SREK1Q8WXA9 508 aaKnown RBP10.08□□□□□ -0.8
SHROOM4-202ENST00000376020 CROCC2H7BZ55 1655 aa10.08□□□□□ -0.8
SHROOM4-202ENST00000376020 DISP3Q9P2K9 1392 aa10.08□□□□□ -0.8
SHROOM4-202ENST00000376020 TTC21AQ8NDW8 1320 aa10.08□□□□□ -0.8
SHROOM4-202ENST00000376020 BICDL2A1A5D9 508 aa10.08□□□□□ -0.8
SHROOM4-202ENST00000376020 SYT1P21579 422 aa10.08□□□□□ -0.8
SHROOM4-202ENST00000376020 CCDC121Q6ZUS5 278 aa10.08□□□□□ -0.8
SHROOM4-202ENST00000376020 OTUD6BQ8N6M0 293 aa10.08□□□□□ -0.8
SHROOM4-202ENST00000376020 DNAI1Q9UI46 699 aa10.08□□□□□ -0.8
SHROOM4-202ENST00000376020 KRT18P05783 430 aaKnown RBP10.07□□□□□ -0.8
SHROOM4-202ENST00000376020 SYKP43405 635 aa10.07□□□□□ -0.8
SHROOM4-202ENST00000376020 FCHSD1Q86WN1 690 aa10.07□□□□□ -0.8
SHROOM4-202ENST00000376020 CCDC77Q9BR77 488 aa10.07□□□□□ -0.8
SHROOM4-202ENST00000376020 SULT6B1Q6IMI4 303 aa10.07□□□□□ -0.8
SHROOM4-202ENST00000376020 CCDC51Q96ER9 411 aa10.07□□□□□ -0.8
SHROOM4-202ENST00000376020 CABP2Q9NPB3 220 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms