RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 GOLGA8AA7E2F4 631 aa11.26□□□□□ -0.61
SPEN-201ENST00000375759 EBAG9O00559 213 aa11.26□□□□□ -0.61
SPEN-201ENST00000375759 N4BP3O15049 544 aa11.26□□□□□ -0.61
SPEN-201ENST00000375759 IQCGQ9H095 443 aaKnown RBP11.26□□□□□ -0.61
SPEN-201ENST00000375759 UBA7P41226 1012 aa11.25□□□□□ -0.61
SPEN-201ENST00000375759 CCT2P78371 535 aaKnown RBP11.25□□□□□ -0.61
SPEN-201ENST00000375759 RRS1Q15050 365 aaKnown RBP11.25□□□□□ -0.61
SPEN-201ENST00000375759 SYKP43405 635 aa11.25□□□□□ -0.61
SPEN-201ENST00000375759 DDX46Q7L014 1031 aaKnown RBP11.25□□□□□ -0.61
SPEN-201ENST00000375759 DDX54Q8TDD1 881 aaKnown RBP11.25□□□□□ -0.61
SPEN-201ENST00000375759 KCNG4Q8TDN1 519 aa11.25□□□□□ -0.61
SPEN-201ENST00000375759 GDPD2Q9HCC8 539 aa11.25□□□□□ -0.61
SPEN-201ENST00000375759 LIG1P18858 919 aa11.25□□□□□ -0.61
SPEN-201ENST00000375759 TTF1Q15361 905 aaPredicted RBP11.25□□□□□ -0.61
SPEN-201ENST00000375759 ZNF444Q8N0Y2 327 aaPredicted RBP11.25□□□□□ -0.61
SPEN-201ENST00000375759 RANBP6O60518 1105 aaKnown RBP11.25□□□□□ -0.61
SPEN-201ENST00000375759 BMP15O95972 392 aa11.25□□□□□ -0.61
SPEN-201ENST00000375759 FAM200AQ8TCP9 573 aa11.25□□□□□ -0.61
SPEN-201ENST00000375759 ZSWIM4Q9H7M6 989 aa11.25□□□□□ -0.61
SPEN-201ENST00000375759 TTC31Q49AM3 519 aaPredicted RBP11.25□□□□□ -0.61
SPEN-201ENST00000375759 SLF2Q8IX21 1173 aa11.25□□□□□ -0.61
SPEN-201ENST00000375759 RAD54L2Q9Y4B4 1467 aa11.25□□□□□ -0.61
SPEN-201ENST00000375759 CCDC94Q9BW85 323 aaPredicted RBP11.25□□□□□ -0.61
SPEN-201ENST00000375759 ZSCAN22P10073 491 aaPredicted RBP11.25□□□□□ -0.61
SPEN-201ENST00000375759 IFIT5Q13325 482 aaKnown RBP11.25□□□□□ -0.61
SPEN-201ENST00000375759 TCERG1LQ5VWI1 586 aa11.25□□□□□ -0.61
SPEN-201ENST00000375759 CCDC121Q6ZUS5 278 aa11.25□□□□□ -0.61
SPEN-201ENST00000375759 DZIP1Q86YF9 867 aaKnown RBP11.25□□□□□ -0.61
SPEN-201ENST00000375759 EXOC1Q9NV70 894 aa11.25□□□□□ -0.61
SPEN-201ENST00000375759 AKR1B10O60218 316 aa11.25□□□□□ -0.61
SPEN-201ENST00000375759 CAPN2P17655 700 aa11.25□□□□□ -0.61
SPEN-201ENST00000375759 IARSP41252 1262 aaKnown RBP11.25□□□□□ -0.61
SPEN-201ENST00000375759 HYPKQ9NX55 129 aa11.25□□□□□ -0.61
SPEN-201ENST00000375759 RBM27Q9P2N5 1060 aaKnown RBP11.24□□□□□ -0.61
SPEN-201ENST00000375759 SLC5A1P13866 664 aa11.24□□□□□ -0.61
SPEN-201ENST00000375759 COMMD10Q9Y6G5 202 aa11.24□□□□□ -0.61
SPEN-201ENST00000375759 SLU7O95391 586 aaKnown RBP11.24□□□□□ -0.61
SPEN-201ENST00000375759 RBM25P49756 843 aaKnown RBP11.24□□□□□ -0.61
SPEN-201ENST00000375759 CCDC77Q9BR77 488 aa11.24□□□□□ -0.61
SPEN-201ENST00000375759 TAF7Q15545 349 aaPredicted RBP11.24□□□□□ -0.61
SPEN-201ENST00000375759 ANO6Q4KMQ2 910 aa11.24□□□□□ -0.61
SPEN-201ENST00000375759 TFIP11Q9UBB9 837 aaKnown RBP11.24□□□□□ -0.61
SPEN-201ENST00000375759 SPAG1Q07617 926 aa11.24□□□□□ -0.61
SPEN-201ENST00000375759 CRACR2BQ8N4Y2 399 aaPredicted RBP11.24□□□□□ -0.61
SPEN-201ENST00000375759 ZFP91Q96JP5 570 aaPredicted RBP11.24□□□□□ -0.61
SPEN-201ENST00000375759 ZKSCAN5Q9Y2L8 839 aa11.24□□□□□ -0.61
SPEN-201ENST00000375759 MYO1BO43795 1136 aa11.24□□□□□ -0.61
SPEN-201ENST00000375759 OTUD6BQ8N6M0 293 aa11.24□□□□□ -0.61
SPEN-201ENST00000375759 ATRIPQ8WXE1 791 aa11.23□□□□□ -0.61
SPEN-201ENST00000375759 TRIM47Q96LD4 638 aa11.23□□□□□ -0.61
SPEN-201ENST00000375759 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.23□□□□□ -0.612e-6■■■□□ 14.6
SPEN-201ENST00000375759 DNAI1Q9UI46 699 aa11.23□□□□□ -0.61
SPEN-201ENST00000375759 METAP2P50579 478 aaKnown RBP eCLIP11.23□□□□□ -0.611e-7■■□□□ 12.1
SPEN-201ENST00000375759 IRX3P78415 501 aaPredicted RBP11.23□□□□□ -0.61
SPEN-201ENST00000375759 MXRA7P84157 204 aa11.23□□□□□ -0.61
SPEN-201ENST00000375759 FAM69CQ0P6D2 419 aa11.23□□□□□ -0.61
SPEN-201ENST00000375759 C20orf194Q5TEA3 1177 aa11.23□□□□□ -0.61
SPEN-201ENST00000375759 SYCP3Q8IZU3 236 aa11.23□□□□□ -0.61
SPEN-201ENST00000375759 NCAPD3P42695 1498 aa11.23□□□□□ -0.61
SPEN-201ENST00000375759 GIMAP6Q6P9H5 292 aa11.23□□□□□ -0.61
SPEN-201ENST00000375759 CCDC129Q6ZRS4 1044 aa11.23□□□□□ -0.61
SPEN-201ENST00000375759 SMC6Q96SB8 1091 aa11.23□□□□□ -0.61
SPEN-201ENST00000375759 TMEM67Q5HYA8 995 aa11.23□□□□□ -0.61
SPEN-201ENST00000375759 CCDC184Q52MB2 194 aa11.23□□□□□ -0.61
SPEN-201ENST00000375759 SCLT1Q96NL6 688 aa11.23□□□□□ -0.61
SPEN-201ENST00000375759 PRC1O43663 620 aa11.22□□□□□ -0.61
SPEN-201ENST00000375759 TRIM27P14373 513 aa11.22□□□□□ -0.61
SPEN-201ENST00000375759 KCNH5Q8NCM2 988 aa11.22□□□□□ -0.61
SPEN-201ENST00000375759 ECHDC1Q9NTX5 307 aa11.22□□□□□ -0.61
SPEN-201ENST00000375759 TTC22Q5TAA0 569 aa11.22□□□□□ -0.61
SPEN-201ENST00000375759 NEK1Q96PY6 1258 aa11.22□□□□□ -0.61
SPEN-201ENST00000375759 USP16Q9Y5T5 823 aa11.22□□□□□ -0.61
SPEN-201ENST00000375759 TACC1O75410 805 aa11.22□□□□□ -0.61
SPEN-201ENST00000375759 AMOTQ4VCS5 1084 aa11.22□□□□□ -0.61
SPEN-201ENST00000375759 MICALL1Q8N3F8 863 aa11.22□□□□□ -0.61
SPEN-201ENST00000375759 CCDC82Q8N4S0 544 aa11.22□□□□□ -0.61
SPEN-201ENST00000375759 LRRC45Q96CN5 670 aa11.22□□□□□ -0.61
SPEN-201ENST00000375759 CEP83Q9Y592 693 aa11.22□□□□□ -0.61
SPEN-201ENST00000375759 ATP2A1O14983 1001 aa11.22□□□□□ -0.61
SPEN-201ENST00000375759 KRT83P78385 493 aa11.22□□□□□ -0.61
SPEN-201ENST00000375759 USP37Q86T82 979 aa11.22□□□□□ -0.61
SPEN-201ENST00000375759 CCDC160A6NGH7 325 aa11.22□□□□□ -0.61
SPEN-201ENST00000375759 KRT86O43790 486 aa11.22□□□□□ -0.61
SPEN-201ENST00000375759 THEMISQ8N1K5 641 aaPredicted RBP11.22□□□□□ -0.61
SPEN-201ENST00000375759 SEPT6Q14141 434 aa11.22□□□□□ -0.61
SPEN-201ENST00000375759 CYB5RLQ6IPT4 315 aa11.22□□□□□ -0.61
SPEN-201ENST00000375759 OSCARQ8IYS5 282 aa11.22□□□□□ -0.61
SPEN-201ENST00000375759 NCOA7Q8NI08 942 aa11.22□□□□□ -0.61
SPEN-201ENST00000375759 SYT1P21579 422 aa11.21□□□□□ -0.61
SPEN-201ENST00000375759 LMBR1Q8WVP7 490 aa11.21□□□□□ -0.61
SPEN-201ENST00000375759 PAIP2Q9BPZ3 127 aaKnown RBP11.21□□□□□ -0.61
SPEN-201ENST00000375759 ORC3Q9UBD5 711 aaPredicted RBP11.21□□□□□ -0.61
SPEN-201ENST00000375759 EPRSP07814 1512 aaKnown RBP11.21□□□□□ -0.61
SPEN-201ENST00000375759 PDE4BQ07343 736 aa11.21□□□□□ -0.61
SPEN-201ENST00000375759 MCM10Q7L590 875 aa11.21□□□□□ -0.61
SPEN-201ENST00000375759 RSRC1Q96IZ7 334 aaKnown RBP11.21□□□□□ -0.61
SPEN-201ENST00000375759 DRC1Q96MC2 740 aa11.21□□□□□ -0.61
SPEN-201ENST00000375759 PABPN1LA6NDY0 278 aaKnown RBP11.21□□□□□ -0.61
SPEN-201ENST00000375759 ATP2C2O75185 946 aa11.21□□□□□ -0.61
SPEN-201ENST00000375759 IDEP14735 1019 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms