RNA–Protein interactions for RNA: ENST00000375549.7

SDHD-201, Transcript of succinate dehydrogenase complex subunit D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHD, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-201ENST00000375549 NUP188Q5SRE5 1749 aa15.44■□□□□ 0.06
SDHD-201ENST00000375549 UBTFL1P0CB47 393 aaPredicted RBP15.43■□□□□ 0.06
SDHD-201ENST00000375549 B4GALNT3Q6L9W6 998 aa15.43■□□□□ 0.06
SDHD-201ENST00000375549 CWC25Q9NXE8 425 aaPredicted RBP15.43■□□□□ 0.06
SDHD-201ENST00000375549 GRM8O00222 908 aa15.43■□□□□ 0.06
SDHD-201ENST00000375549 NBPF7P0C2Y1 421 aaPredicted RBP15.43■□□□□ 0.06
SDHD-201ENST00000375549 CCDC191Q8NCU4 936 aa15.43■□□□□ 0.06
SDHD-201ENST00000375549 PCDHB15Q9Y5E8 787 aa15.43■□□□□ 0.06
SDHD-201ENST00000375549 GNAI2P04899 355 aa15.42■□□□□ 0.06
SDHD-201ENST00000375549 POLA2Q14181 598 aa15.42■□□□□ 0.06
SDHD-201ENST00000375549 CLEC4GQ6UXB4 293 aa15.42■□□□□ 0.06
SDHD-201ENST00000375549 JARID2Q92833 1246 aaPredicted RBP15.42■□□□□ 0.06
SDHD-201ENST00000375549 STK32BQ9NY57 414 aa15.42■□□□□ 0.06
SDHD-201ENST00000375549 USP42Q9H9J4 1324 aaKnown RBP15.41■□□□□ 0.06
SDHD-201ENST00000375549 TRIM28Q13263 835 aaKnown RBP15.41■□□□□ 0.06
SDHD-201ENST00000375549 NLRP10Q86W26 655 aa15.41■□□□□ 0.06
SDHD-201ENST00000375549 ZNF34Q8IZ26 560 aa15.41■□□□□ 0.06
SDHD-201ENST00000375549 UPF1Q92900 1129 aaKnown RBP eCLIP15.41■□□□□ 0.061e-6■□□□□ 9.2
SDHD-201ENST00000375549 BCL2L12Q9HB09 334 aa15.41■□□□□ 0.06
SDHD-201ENST00000375549 ANO8Q9HCE9 1232 aaPredicted RBP15.41■□□□□ 0.06
SDHD-201ENST00000375549 NIP7Q9Y221 180 aaKnown RBP eCLIP15.41■□□□□ 0.06
SDHD-201ENST00000375549 LRRFIP2Q9Y608 721 aaKnown RBP15.41■□□□□ 0.06
SDHD-201ENST00000375549 N4BP2Q86UW6 1770 aaPredicted RBP15.4■□□□□ 0.06
SDHD-201ENST00000375549 SLC15A2Q16348 729 aa15.4■□□□□ 0.06
SDHD-201ENST00000375549 RTL5Q5HYW3 569 aaPredicted RBP15.4■□□□□ 0.06
SDHD-201ENST00000375549 BICDL1Q6ZP65 573 aa15.4■□□□□ 0.06
SDHD-201ENST00000375549 UBE3BQ7Z3V4 1068 aa15.4■□□□□ 0.06
SDHD-201ENST00000375549 FLAD1Q8NFF5 587 aa15.4■□□□□ 0.06
SDHD-201ENST00000375549 UTYO14607 1347 aa15.39■□□□□ 0.05
SDHD-201ENST00000375549 UBN2Q6ZU65 1347 aa15.39■□□□□ 0.05
SDHD-201ENST00000375549 IBTKQ9P2D0 1353 aaPredicted RBP15.39■□□□□ 0.05
SDHD-201ENST00000375549 FAM177BA6PVY3 158 aa15.39■□□□□ 0.05
SDHD-201ENST00000375549 H7C1W4 665 aa15.39■□□□□ 0.05
SDHD-201ENST00000375549 RGL2O15211 777 aa15.39■□□□□ 0.05
SDHD-201ENST00000375549 TBC1D9BQ66K14 1250 aa15.39■□□□□ 0.05
SDHD-201ENST00000375549 HDAC5Q9UQL6 1122 aa15.39■□□□□ 0.05
SDHD-201ENST00000375549 PARP10Q53GL7 1025 aa15.38■□□□□ 0.05
SDHD-201ENST00000375549 COL23A1Q86Y22 540 aaPredicted RBP15.38■□□□□ 0.05
SDHD-201ENST00000375549 SUCLG2Q96I99 432 aa15.38■□□□□ 0.05
SDHD-201ENST00000375549 TRMT112Q9UI30 125 aaKnown RBP15.38■□□□□ 0.05
SDHD-201ENST00000375549 UBR3Q6ZT12 1888 aa15.37■□□□□ 0.05
SDHD-201ENST00000375549 SUSD4Q5VX71 490 aa15.37■□□□□ 0.05
SDHD-201ENST00000375549 CEP85Q6P2H3 762 aa15.37■□□□□ 0.05
SDHD-201ENST00000375549 FAM89AQ96GI7 184 aa15.37■□□□□ 0.05
SDHD-201ENST00000375549 RWDD1Q9H446 243 aaPredicted RBP15.37■□□□□ 0.05
SDHD-201ENST00000375549 PNPLA7Q6ZV29 1317 aa15.37■□□□□ 0.05
SDHD-201ENST00000375549 BCORQ6W2J9 1755 aa15.37■□□□□ 0.05
SDHD-201ENST00000375549 SCN7AQ01118 1682 aa15.36■□□□□ 0.05
SDHD-201ENST00000375549 IGHDP01880 384 aa15.36■□□□□ 0.05
SDHD-201ENST00000375549 PCCAP05165 728 aaPredicted RBP15.36■□□□□ 0.05
SDHD-201ENST00000375549 GYS1P13807 737 aa15.36■□□□□ 0.05
SDHD-201ENST00000375549 CASP7P55210 303 aa15.36■□□□□ 0.05
SDHD-201ENST00000375549 PPP1R42Q7Z4L9 355 aa15.36■□□□□ 0.05
SDHD-201ENST00000375549 RPAP2Q8IXW5 612 aaPredicted RBP15.36■□□□□ 0.05
SDHD-201ENST00000375549 ANKRD44Q8N8A2 993 aa15.36■□□□□ 0.05
SDHD-201ENST00000375549 ZBTB38Q8NAP3 1195 aaPredicted RBP15.36■□□□□ 0.05
SDHD-201ENST00000375549 SETDB2Q96T68 719 aa15.36■□□□□ 0.05
SDHD-201ENST00000375549 UTP14AQ9BVJ6 771 aaKnown RBP15.36■□□□□ 0.05
SDHD-201ENST00000375549 SIRT2Q8IXJ6 389 aa15.35■□□□□ 0.05
SDHD-201ENST00000375549 BICC1Q9H694 974 aaKnown RBP15.35■□□□□ 0.05
SDHD-201ENST00000375549 AFDNP55196 1824 aaKnown RBP15.35■□□□□ 0.05
SDHD-201ENST00000375549 C4AP0C0L4 1744 aa15.35■□□□□ 0.05
SDHD-201ENST00000375549 NUP98P52948 1817 aa15.35■□□□□ 0.05
SDHD-201ENST00000375549 SYNE4Q8N205 404 aa15.34■□□□□ 0.05
SDHD-201ENST00000375549 KAZALD1Q96I82 304 aa15.34■□□□□ 0.05
SDHD-201ENST00000375549 NTSR2O95665 410 aa15.34■□□□□ 0.05
SDHD-201ENST00000375549 ATP8B2P98198 1209 aa15.34■□□□□ 0.05
SDHD-201ENST00000375549 HDAC1Q13547 482 aaPredicted RBP15.34■□□□□ 0.05
SDHD-201ENST00000375549 NFIXQ14938 502 aa15.34■□□□□ 0.05
SDHD-201ENST00000375549 EPHA10Q5JZY3 1008 aa15.34■□□□□ 0.05
SDHD-201ENST00000375549 ANKRD36CQ5JPF3 1778 aa15.33■□□□□ 0.05
SDHD-201ENST00000375549 SH3TC1Q8TE82 1336 aa15.33■□□□□ 0.05
SDHD-201ENST00000375549 PNMA6EA0A0J9YXQ4 647 aa15.33■□□□□ 0.04
SDHD-201ENST00000375549 IRS4O14654 1257 aaPredicted RBP15.33■□□□□ 0.04
SDHD-201ENST00000375549 HMMRO75330 724 aa15.33■□□□□ 0.04
SDHD-201ENST00000375549 GTF2E1P29083 439 aaPredicted RBP15.33■□□□□ 0.04
SDHD-201ENST00000375549 NBPF5PQ86XG9 351 aaPredicted RBP15.33■□□□□ 0.04
SDHD-201ENST00000375549 NUTM1Q86Y26 1132 aa15.33■□□□□ 0.04
SDHD-201ENST00000375549 CDHR2Q9BYE9 1310 aa15.33■□□□□ 0.04
SDHD-201ENST00000375549 SRGAP3O43295 1099 aa15.32■□□□□ 0.04
SDHD-201ENST00000375549 CENPQQ7L2Z9 268 aaPredicted RBP15.32■□□□□ 0.04
SDHD-201ENST00000375549 NLGN1Q8N2Q7 840 aa15.32■□□□□ 0.04
SDHD-201ENST00000375549 SP7Q8TDD2 431 aaPredicted RBP15.32■□□□□ 0.04
SDHD-201ENST00000375549 NYXQ9GZU5 481 aa15.32■□□□□ 0.04
SDHD-201ENST00000375549 NPHP1O15259 732 aa15.31■□□□□ 0.04
SDHD-201ENST00000375549 FOXO4P98177 505 aa15.31■□□□□ 0.04
SDHD-201ENST00000375549 ERFEQ4G0M1 354 aa15.31■□□□□ 0.04
SDHD-201ENST00000375549 MSL1Q68DK7 614 aa15.31■□□□□ 0.04
SDHD-201ENST00000375549 LMBR1LQ6UX01 489 aa15.31■□□□□ 0.04
SDHD-201ENST00000375549 CHMP3Q9Y3E7 222 aa15.31■□□□□ 0.04
SDHD-201ENST00000375549 TUBGCP6Q96RT7 1819 aa15.31■□□□□ 0.04
SDHD-201ENST00000375549 KDM2BQ8NHM5 1336 aa15.31■□□□□ 0.04
SDHD-201ENST00000375549 CARMIL3Q8ND23 1372 aa15.31■□□□□ 0.04
SDHD-201ENST00000375549 HCLS1P14317 486 aaPredicted RBP15.3■□□□□ 0.04
SDHD-201ENST00000375549 TM4SF1P30408 202 aa15.3■□□□□ 0.04
SDHD-201ENST00000375549 MTX1Q13505 466 aa15.3■□□□□ 0.04
SDHD-201ENST00000375549 TPTE2Q6XPS3 522 aa15.3■□□□□ 0.04
SDHD-201ENST00000375549 PLA2G12BQ9BX93 195 aa15.3■□□□□ 0.04
SDHD-201ENST00000375549 PDE8AO60658 829 aa15.29■□□□□ 0.04
SDHD-201ENST00000375549 SERPINB2P05120 415 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms