RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 LRRC59Q96AG4 307 aaKnown RBP7.64□□□□□ -1.19
SMC1A-202ENST00000375340 LARP1Q6PKG0 1096 aaKnown RBP7.64□□□□□ -1.19
SMC1A-202ENST00000375340 LEKR1Q6ZMV7 388 aa7.64□□□□□ -1.19
SMC1A-202ENST00000375340 SFPQP23246 707 aaKnown RBP eCLIP7.64□□□□□ -1.19
SMC1A-202ENST00000375340 METTL24Q5JXM2 366 aa7.64□□□□□ -1.19
SMC1A-202ENST00000375340 GPT2Q8TD30 523 aa7.64□□□□□ -1.19
SMC1A-202ENST00000375340 MAP3K5Q99683 1374 aa7.64□□□□□ -1.19
SMC1A-202ENST00000375340 TRIM22Q8IYM9 498 aa7.64□□□□□ -1.19
SMC1A-202ENST00000375340 TMX4Q9H1E5 349 aaPredicted RBP7.64□□□□□ -1.19
SMC1A-202ENST00000375340 AK9Q5TCS8 1911 aa7.64□□□□□ -1.19
SMC1A-202ENST00000375340 ZFYVE16Q7Z3T8 1539 aa7.64□□□□□ -1.19
SMC1A-202ENST00000375340 TYRO3Q06418 890 aa7.63□□□□□ -1.19
SMC1A-202ENST00000375340 CCDC129Q6ZRS4 1044 aa7.63□□□□□ -1.19
SMC1A-202ENST00000375340 NEK1Q96PY6 1258 aa7.63□□□□□ -1.19
SMC1A-202ENST00000375340 DDX19AQ9NUU7 478 aaKnown RBP7.63□□□□□ -1.19
SMC1A-202ENST00000375340 DBF4Q9UBU7 674 aaPredicted RBP7.63□□□□□ -1.19
SMC1A-202ENST00000375340 CCDC186Q7Z3E2 898 aa7.63□□□□□ -1.19
SMC1A-202ENST00000375340 AIDAQ96BJ3 306 aa7.63□□□□□ -1.19
SMC1A-202ENST00000375340 CDKL5O76039 1030 aa7.63□□□□□ -1.19
SMC1A-202ENST00000375340 SLC39A6Q13433 755 aa7.63□□□□□ -1.19
SMC1A-202ENST00000375340 AXDND1Q5T1B0 1012 aaPredicted RBP7.63□□□□□ -1.19
SMC1A-202ENST00000375340 AOPEPQ8N6M6 819 aa7.63□□□□□ -1.19
SMC1A-202ENST00000375340 CPLX3Q8WVH0 158 aa7.63□□□□□ -1.19
SMC1A-202ENST00000375340 PLA2R1Q13018 1463 aa7.63□□□□□ -1.19
SMC1A-202ENST00000375340 UBE3BQ7Z3V4 1068 aa7.63□□□□□ -1.19
SMC1A-202ENST00000375340 GAS2L3Q86XJ1 694 aa7.63□□□□□ -1.19
SMC1A-202ENST00000375340 DACH1Q9UI36 760 aa7.63□□□□□ -1.19
SMC1A-202ENST00000375340 RUFY3Q7L099 469 aa7.63□□□□□ -1.19
SMC1A-202ENST00000375340 PNMA6EA0A0J9YXQ4 647 aa7.63□□□□□ -1.19
SMC1A-202ENST00000375340 ZNF165P49910 485 aa7.63□□□□□ -1.19
SMC1A-202ENST00000375340 CREB3L3Q68CJ9 461 aa7.63□□□□□ -1.19
SMC1A-202ENST00000375340 DACT1Q9NYF0 836 aa7.63□□□□□ -1.19
SMC1A-202ENST00000375340 IGSF3O75054 1194 aa7.63□□□□□ -1.19
SMC1A-202ENST00000375340 CCDC102AQ96A19 550 aa7.63□□□□□ -1.19
SMC1A-202ENST00000375340 ZBTB3Q9H5J0 574 aa7.63□□□□□ -1.19
SMC1A-202ENST00000375340 BICC1Q9H694 974 aaKnown RBP7.63□□□□□ -1.19
SMC1A-202ENST00000375340 GLI2P10070 1586 aa7.63□□□□□ -1.19
SMC1A-202ENST00000375340 ERCC6L2Q5T890 1561 aa7.63□□□□□ -1.19
SMC1A-202ENST00000375340 SNW1Q13573 536 aaKnown RBP7.63□□□□□ -1.19
SMC1A-202ENST00000375340 URI1O94763 535 aaPredicted RBP7.62□□□□□ -1.19
SMC1A-202ENST00000375340 KIF18AQ8NI77 898 aa7.62□□□□□ -1.19
SMC1A-202ENST00000375340 CTNNA3Q9UI47 895 aa7.62□□□□□ -1.19
SMC1A-202ENST00000375340 A0A087WZG4 1122 aa7.62□□□□□ -1.19
SMC1A-202ENST00000375340 TOP1P11387 765 aaKnown RBP7.62□□□□□ -1.19
SMC1A-202ENST00000375340 BRF1Q92994 677 aa7.62□□□□□ -1.19
SMC1A-202ENST00000375340 USP19O94966 1318 aa7.62□□□□□ -1.19
SMC1A-202ENST00000375340 ANKRD24Q8TF21 1146 aa7.62□□□□□ -1.19
SMC1A-202ENST00000375340 CCDC94Q9BW85 323 aaPredicted RBP7.62□□□□□ -1.19
SMC1A-202ENST00000375340 SNX14Q9Y5W7 946 aa7.62□□□□□ -1.19
SMC1A-202ENST00000375340 CDK5RAP3Q96JB5 506 aa7.62□□□□□ -1.19
SMC1A-202ENST00000375340 PRIMPOLQ96LW4 560 aa7.62□□□□□ -1.19
SMC1A-202ENST00000375340 RAI14Q9P0K7 980 aa7.62□□□□□ -1.19
SMC1A-202ENST00000375340 CEP126Q9P2H0 1117 aa7.62□□□□□ -1.19
SMC1A-202ENST00000375340 NOL7Q9UMY1 257 aaKnown RBP7.62□□□□□ -1.19
SMC1A-202ENST00000375340 MYOM2P54296 1465 aa7.62□□□□□ -1.19
SMC1A-202ENST00000375340 EDC4Q6P2E9 1401 aaKnown RBP7.62□□□□□ -1.19
SMC1A-202ENST00000375340 PHF8Q9UPP1 1060 aa7.62□□□□□ -1.19
SMC1A-202ENST00000375340 TNRQ92752 1358 aa7.62□□□□□ -1.19
SMC1A-202ENST00000375340 ANAPC15P60006 121 aa7.62□□□□□ -1.19
SMC1A-202ENST00000375340 APOBRQ0VD83 1088 aa7.62□□□□□ -1.19
SMC1A-202ENST00000375340 BICDL1Q6ZP65 573 aa7.62□□□□□ -1.19
SMC1A-202ENST00000375340 TSC1Q92574 1164 aa7.62□□□□□ -1.19
SMC1A-202ENST00000375340 ANTXR1Q9H6X2 564 aa7.62□□□□□ -1.19
SMC1A-202ENST00000375340 ABCC4O15439 1325 aa7.62□□□□□ -1.19
SMC1A-202ENST00000375340 UBAC1Q9BSL1 405 aa7.62□□□□□ -1.19
SMC1A-202ENST00000375340 NDUFB9Q9Y6M9 179 aa7.62□□□□□ -1.19
SMC1A-202ENST00000375340 TFCP2Q12800 502 aa7.61□□□□□ -1.19
SMC1A-202ENST00000375340 POGZQ7Z3K3 1410 aa7.61□□□□□ -1.19
SMC1A-202ENST00000375340 TMEM63CQ9P1W3 806 aa7.61□□□□□ -1.19
SMC1A-202ENST00000375340 SSRP1Q08945 709 aaKnown RBP7.61□□□□□ -1.19
SMC1A-202ENST00000375340 ZSCAN25Q6NSZ9 544 aa7.61□□□□□ -1.19
SMC1A-202ENST00000375340 SOS1Q07889 1333 aaPredicted RBP7.61□□□□□ -1.19
SMC1A-202ENST00000375340 CLASP1Q7Z460 1538 aa7.61□□□□□ -1.19
SMC1A-202ENST00000375340 TXLNAP40222 546 aa7.61□□□□□ -1.19
SMC1A-202ENST00000375340 UBXN4Q92575 508 aa7.61□□□□□ -1.19
SMC1A-202ENST00000375340 NACAP1Q9BZK3 213 aa7.61□□□□□ -1.19
SMC1A-202ENST00000375340 PALD1Q9ULE6 856 aa7.61□□□□□ -1.19
SMC1A-202ENST00000375340 LAMC1P11047 1609 aa7.61□□□□□ -1.19
SMC1A-202ENST00000375340 GOLGA8AA7E2F4 631 aa7.61□□□□□ -1.19
SMC1A-202ENST00000375340 MARCKSP29966 332 aaPredicted RBP7.61□□□□□ -1.19
SMC1A-202ENST00000375340 MPHOSPH8Q99549 860 aa7.61□□□□□ -1.19
SMC1A-202ENST00000375340 TMCO3Q6UWJ1 677 aa7.61□□□□□ -1.19
SMC1A-202ENST00000375340 KCNH5Q8NCM2 988 aa7.61□□□□□ -1.19
SMC1A-202ENST00000375340 MINDY4BA8MYZ0 360 aa7.61□□□□□ -1.19
SMC1A-202ENST00000375340 AMOTQ4VCS5 1084 aa7.61□□□□□ -1.19
SMC1A-202ENST00000375340 XAGE3Q8WTP9 111 aa7.61□□□□□ -1.19
SMC1A-202ENST00000375340 TANGO6Q9C0B7 1094 aa7.61□□□□□ -1.19
SMC1A-202ENST00000375340 ZSWIM4Q9H7M6 989 aa7.61□□□□□ -1.19
SMC1A-202ENST00000375340 LIG1P18858 919 aa7.61□□□□□ -1.19
SMC1A-202ENST00000375340 SYT1P21579 422 aa7.61□□□□□ -1.19
SMC1A-202ENST00000375340 USP16Q9Y5T5 823 aa7.61□□□□□ -1.19
SMC1A-202ENST00000375340 GPTP24298 496 aa7.6□□□□□ -1.19
SMC1A-202ENST00000375340 MICU3Q86XE3 530 aa7.6□□□□□ -1.19
SMC1A-202ENST00000375340 KLHDC4Q8TBB5 520 aa7.6□□□□□ -1.19
SMC1A-202ENST00000375340 FAM200AQ8TCP9 573 aa7.6□□□□□ -1.19
SMC1A-202ENST00000375340 EYA1Q99502 592 aa7.6□□□□□ -1.19
SMC1A-202ENST00000375340 LRP2BPQ9P2M1 347 aa7.6□□□□□ -1.19
SMC1A-202ENST00000375340 SLC12A7Q9Y666 1083 aa7.6□□□□□ -1.19
SMC1A-202ENST00000375340 SLC3A2P08195 630 aaKnown RBP7.6□□□□□ -1.19
SMC1A-202ENST00000375340 GTF2F1P35269 517 aaKnown RBP eCLIP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms