RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 CCDC26Q8TAB7 109 aa7.56□□□□□ -1.2
UBR4-204ENST00000375254 CTTNBP2NLQ9P2B4 639 aa7.56□□□□□ -1.2
UBR4-204ENST00000375254 EVI5O60447 810 aa7.56□□□□□ -1.2
UBR4-204ENST00000375254 TERF2Q15554 542 aa7.56□□□□□ -1.2
UBR4-204ENST00000375254 PRIM1P49642 420 aaKnown RBP7.56□□□□□ -1.2
UBR4-204ENST00000375254 CYLC1P35663 651 aaPredicted RBP7.56□□□□□ -1.2
UBR4-204ENST00000375254 SEPT2Q15019 361 aa7.56□□□□□ -1.2
UBR4-204ENST00000375254 TSC1Q92574 1164 aa7.56□□□□□ -1.2
UBR4-204ENST00000375254 ZEB2O60315 1214 aa7.56□□□□□ -1.2
UBR4-204ENST00000375254 RRP36Q96EU6 259 aaKnown RBP7.55□□□□□ -1.2
UBR4-204ENST00000375254 EFCAB8A8MWE9 144 aa7.55□□□□□ -1.2
UBR4-204ENST00000375254 DEUP1Q05D60 604 aa7.55□□□□□ -1.2
UBR4-204ENST00000375254 PPFIA4O75335 1185 aa7.55□□□□□ -1.2
UBR4-204ENST00000375254 CCDC102BQ68D86 513 aa7.55□□□□□ -1.2
UBR4-204ENST00000375254 DRC3Q9H069 523 aa7.55□□□□□ -1.2
UBR4-204ENST00000375254 AKAP2Q9Y2D5 859 aa7.55□□□□□ -1.2
UBR4-204ENST00000375254 CCDC186Q7Z3E2 898 aa7.55□□□□□ -1.2
UBR4-204ENST00000375254 A0A1W2PRG0 241 aa7.55□□□□□ -1.2
UBR4-204ENST00000375254 NMIQ13287 307 aaPredicted RBP7.55□□□□□ -1.2
UBR4-204ENST00000375254 PPP2R3AQ06190 1150 aa7.55□□□□□ -1.2
UBR4-204ENST00000375254 TPX2Q9ULW0 747 aaKnown RBP7.55□□□□□ -1.2
UBR4-204ENST00000375254 CCDC170Q8IYT3 715 aa7.55□□□□□ -1.2
UBR4-204ENST00000375254 IQCDQ96DY2 449 aa7.55□□□□□ -1.2
UBR4-204ENST00000375254 ZWINTO95229 277 aa7.55□□□□□ -1.2
UBR4-204ENST00000375254 SECISBP2LQ93073 1101 aaKnown RBP7.55□□□□□ -1.2
UBR4-204ENST00000375254 DDX58O95786 925 aaKnown RBP7.55□□□□□ -1.2
UBR4-204ENST00000375254 TRPC3Q13507 836 aa7.55□□□□□ -1.2
UBR4-204ENST00000375254 MIS18AQ9NYP9 233 aa7.55□□□□□ -1.2
UBR4-204ENST00000375254 TROVE2P10155 538 aaKnown RBP eCLIP7.55□□□□□ -1.2
UBR4-204ENST00000375254 CCDC113Q9H0I3 377 aa7.55□□□□□ -1.2
UBR4-204ENST00000375254 IKBKGQ9Y6K9 419 aa7.55□□□□□ -1.2
UBR4-204ENST00000375254 NDC80O14777 642 aa7.55□□□□□ -1.2
UBR4-204ENST00000375254 PPP2R5AQ15172 486 aa7.55□□□□□ -1.2
UBR4-204ENST00000375254 TTC12Q9H892 705 aaPredicted RBP7.55□□□□□ -1.2
UBR4-204ENST00000375254 HOMER2Q9NSB8 354 aa7.55□□□□□ -1.2
UBR4-204ENST00000375254 SCOCQ9UIL1 159 aa7.54□□□□□ -1.2
UBR4-204ENST00000375254 SPECC1L-ADORA2AF8WAN1 911 aa7.54□□□□□ -1.2
UBR4-204ENST00000375254 KIF5AQ12840 1032 aa7.54□□□□□ -1.2
UBR4-204ENST00000375254 TNIP1Q15025 636 aa7.54□□□□□ -1.2
UBR4-204ENST00000375254 ISM2Q6H9L7 571 aa7.54□□□□□ -1.2
UBR4-204ENST00000375254 FAM71BQ8TC56 605 aa7.54□□□□□ -1.2
UBR4-204ENST00000375254 CAPZA3Q96KX2 299 aa7.54□□□□□ -1.2
UBR4-204ENST00000375254 TSC22D3Q99576 134 aa7.54□□□□□ -1.2
UBR4-204ENST00000375254 ATP2A1O14983 1001 aa7.54□□□□□ -1.2
UBR4-204ENST00000375254 PPP1R12CQ9BZL4 782 aa7.54□□□□□ -1.2
UBR4-204ENST00000375254 HDAC9Q9UKV0 1011 aa7.54□□□□□ -1.2
UBR4-204ENST00000375254 BMP2KLQ5H9B9 411 aa7.54□□□□□ -1.2
UBR4-204ENST00000375254 MRFAP1L1Q96HT8 127 aa7.54□□□□□ -1.2
UBR4-204ENST00000375254 NKIRAS1Q9NYS0 192 aa7.54□□□□□ -1.2
UBR4-204ENST00000375254 ATP2A2P16615 1042 aaKnown RBP7.54□□□□□ -1.2
UBR4-204ENST00000375254 SYT1P21579 422 aa7.54□□□□□ -1.2
UBR4-204ENST00000375254 AMPD3Q01432 767 aa7.54□□□□□ -1.2
UBR4-204ENST00000375254 JADE2Q9NQC1 790 aa7.54□□□□□ -1.2
UBR4-204ENST00000375254 CXorf56Q9H5V9 222 aa7.54□□□□□ -1.2
UBR4-204ENST00000375254 GSTTP1A0A1W2PQM5 241 aa7.54□□□□□ -1.2
UBR4-204ENST00000375254 GNAI2P04899 355 aa7.54□□□□□ -1.2
UBR4-204ENST00000375254 COG7P83436 770 aa7.54□□□□□ -1.2
UBR4-204ENST00000375254 FBXO41Q8TF61 875 aa7.54□□□□□ -1.2
UBR4-204ENST00000375254 HAUS1Q96CS2 278 aa7.54□□□□□ -1.2
UBR4-204ENST00000375254 SCINQ9Y6U3 715 aa7.54□□□□□ -1.2
UBR4-204ENST00000375254 TRIM21P19474 475 aaKnown RBP7.54□□□□□ -1.2
UBR4-204ENST00000375254 BIRC2Q13490 618 aa7.54□□□□□ -1.2
UBR4-204ENST00000375254 RAB11FIP3O75154 756 aa7.54□□□□□ -1.2
UBR4-204ENST00000375254 GKAP1Q5VSY0 366 aaPredicted RBP7.54□□□□□ -1.2
UBR4-204ENST00000375254 PANK1Q8TE04 598 aa7.54□□□□□ -1.2
UBR4-204ENST00000375254 FAF1Q9UNN5 650 aaPredicted RBP7.54□□□□□ -1.2
UBR4-204ENST00000375254 CAPN7Q9Y6W3 813 aa7.54□□□□□ -1.2
UBR4-204ENST00000375254 NUP88Q99567 741 aaPredicted RBP7.54□□□□□ -1.2
UBR4-204ENST00000375254 C9orf78Q9NZ63 289 aaPredicted RBP7.54□□□□□ -1.2
UBR4-204ENST00000375254 CHMP4BP1P59074 171 aa7.53□□□□□ -1.2
UBR4-204ENST00000375254 PLCB1Q9NQ66 1216 aa7.53□□□□□ -1.2
UBR4-204ENST00000375254 KRT86O43790 486 aa7.53□□□□□ -1.2
UBR4-204ENST00000375254 SKIP12755 728 aa7.53□□□□□ -1.2
UBR4-204ENST00000375254 ACTR5Q9H9F9 607 aaPredicted RBP7.53□□□□□ -1.2
UBR4-204ENST00000375254 TEX9Q8N6V9 391 aa7.53□□□□□ -1.2
UBR4-204ENST00000375254 DONSONQ9NYP3 566 aa7.53□□□□□ -1.2
UBR4-204ENST00000375254 LMNAP02545 664 aaKnown RBP7.53□□□□□ -1.2
UBR4-204ENST00000375254 CCT4P50991 539 aaKnown RBP7.53□□□□□ -1.2
UBR4-204ENST00000375254 ESRRGP62508 458 aa7.53□□□□□ -1.2
UBR4-204ENST00000375254 PNMA8AQ86V59 439 aaPredicted RBP7.53□□□□□ -1.2
UBR4-204ENST00000375254 TSG101Q99816 390 aa7.53□□□□□ -1.2
UBR4-204ENST00000375254 PCYT1AP49585 367 aa7.53□□□□□ -1.2
UBR4-204ENST00000375254 U2AF2P26368 475 aaKnown RBP eCLIP7.53□□□□□ -1.25e-7■■■■□ 21.2
UBR4-204ENST00000375254 CAMK4Q16566 473 aa7.53□□□□□ -1.2
UBR4-204ENST00000375254 TSKSQ9UJT2 592 aa7.53□□□□□ -1.2
UBR4-204ENST00000375254 U3KPZ7 1027 aaPredicted RBP7.53□□□□□ -1.2
UBR4-204ENST00000375254 RNASELQ05823 741 aaKnown RBP7.53□□□□□ -1.2
UBR4-204ENST00000375254 SLC20A2Q08357 652 aa7.53□□□□□ -1.2
UBR4-204ENST00000375254 MPNDQ8N594 471 aa7.53□□□□□ -1.2
UBR4-204ENST00000375254 RABGGTAQ92696 567 aa7.53□□□□□ -1.2
UBR4-204ENST00000375254 SUFUQ9UMX1 484 aa7.53□□□□□ -1.2
UBR4-204ENST00000375254 GOLGA6BA6NDN3 693 aa7.53□□□□□ -1.2
UBR4-204ENST00000375254 BMP15O95972 392 aa7.53□□□□□ -1.2
UBR4-204ENST00000375254 JPH2Q9BR39 696 aaPredicted RBP7.53□□□□□ -1.2
UBR4-204ENST00000375254 ST20-MTHFSA0A0A6YYL1 179 aa7.53□□□□□ -1.2
UBR4-204ENST00000375254 FLOT1O75955 427 aa7.53□□□□□ -1.2
UBR4-204ENST00000375254 TAOK1Q7L7X3 1001 aa7.53□□□□□ -1.2
UBR4-204ENST00000375254 FBXO18Q8NFZ0 1043 aa7.53□□□□□ -1.2
UBR4-204ENST00000375254 DNAI2Q9GZS0 605 aa7.53□□□□□ -1.2
UBR4-204ENST00000375254 PRC1O43663 620 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms