RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 OGFRQ9NZT2 677 aa22.72■■□□□ 1.23
COL15A1-201ENST00000375001 LRP2BPQ9P2M1 347 aa22.72■■□□□ 1.23
COL15A1-201ENST00000375001 CCDC114Q96M63 670 aa22.71■■□□□ 1.23
COL15A1-201ENST00000375001 N4BP3O15049 544 aa22.71■■□□□ 1.23
COL15A1-201ENST00000375001 TTC22Q5TAA0 569 aa22.71■■□□□ 1.23
COL15A1-201ENST00000375001 NBPF11Q86T75 865 aa22.71■■□□□ 1.23
COL15A1-201ENST00000375001 CCDC85AQ96PX6 553 aaPredicted RBP22.71■■□□□ 1.23
COL15A1-201ENST00000375001 AKR1B10O60218 316 aa22.7■■□□□ 1.22
COL15A1-201ENST00000375001 ZEB2O60315 1214 aa22.7■■□□□ 1.22
COL15A1-201ENST00000375001 NUCB1Q02818 461 aa22.7■■□□□ 1.22
COL15A1-201ENST00000375001 KIAA0753Q2KHM9 967 aa22.7■■□□□ 1.22
COL15A1-201ENST00000375001 PPP1R14CQ8TAE6 165 aa22.7■■□□□ 1.22
COL15A1-201ENST00000375001 ANKS4BQ8N8V4 417 aa22.7■■□□□ 1.22
COL15A1-201ENST00000375001 TAF7Q15545 349 aaPredicted RBP22.7■■□□□ 1.22
COL15A1-201ENST00000375001 CCDC8Q9H0W5 538 aaPredicted RBP22.7■■□□□ 1.22
COL15A1-201ENST00000375001 SPTY2D1Q68D10 685 aaPredicted RBP22.7■■□□□ 1.22
COL15A1-201ENST00000375001 KIF4AO95239 1232 aa22.69■■□□□ 1.22
COL15A1-201ENST00000375001 HDAC1Q13547 482 aaPredicted RBP22.69■■□□□ 1.22
COL15A1-201ENST00000375001 DNAJC21Q5F1R6 531 aaKnown RBP22.69■■□□□ 1.22
COL15A1-201ENST00000375001 POLR3DP05423 398 aaPredicted RBP22.69■■□□□ 1.22
COL15A1-201ENST00000375001 HSP90AA4PQ58FG1 418 aa22.69■■□□□ 1.22
COL15A1-201ENST00000375001 GOLGA1Q92805 767 aa22.69■■□□□ 1.22
COL15A1-201ENST00000375001 FAM200AQ8TCP9 573 aa22.69■■□□□ 1.22
COL15A1-201ENST00000375001 CCDC196A0A1B0GTZ2 297 aa22.69■■□□□ 1.22
COL15A1-201ENST00000375001 CCDC40Q4G0X9 1142 aa22.69■■□□□ 1.22
COL15A1-201ENST00000375001 GTF3C6Q969F1 213 aa22.69■■□□□ 1.22
COL15A1-201ENST00000375001 CFAP57Q96MR6 1250 aa22.69■■□□□ 1.22
COL15A1-201ENST00000375001 HMGB1P09429 215 aaKnown RBP22.68■■□□□ 1.22
COL15A1-201ENST00000375001 RSRC1Q96IZ7 334 aaKnown RBP22.68■■□□□ 1.22
COL15A1-201ENST00000375001 SEPT6Q14141 434 aa22.68■■□□□ 1.22
COL15A1-201ENST00000375001 A0A1B0GUL7 405 aa22.68■■□□□ 1.22
COL15A1-201ENST00000375001 GOLGA8BA8MQT2 603 aa22.68■■□□□ 1.22
COL15A1-201ENST00000375001 TCERG1LQ5VWI1 586 aa22.68■■□□□ 1.22
COL15A1-201ENST00000375001 PPFIA3O75145 1194 aa22.68■■□□□ 1.22
COL15A1-201ENST00000375001 CCDC102BQ68D86 513 aa22.68■■□□□ 1.22
COL15A1-201ENST00000375001 MAGI1Q96QZ7 1491 aaPredicted RBP22.67■■□□□ 1.22
COL15A1-201ENST00000375001 PRIM1P49642 420 aaKnown RBP22.67■■□□□ 1.22
COL15A1-201ENST00000375001 FEZ1Q99689 392 aa22.67■■□□□ 1.22
COL15A1-201ENST00000375001 CPSF2Q9P2I0 782 aaKnown RBP22.67■■□□□ 1.22
COL15A1-201ENST00000375001 IFT140Q96RY7 1462 aa22.67■■□□□ 1.22
COL15A1-201ENST00000375001 MINDY4BA8MYZ0 360 aa22.67■■□□□ 1.22
COL15A1-201ENST00000375001 KRBA2Q6ZNG9 492 aa22.67■■□□□ 1.22
COL15A1-201ENST00000375001 KIF5BP33176 963 aa22.67■■□□□ 1.22
COL15A1-201ENST00000375001 DNMBPQ6XZF7 1577 aa22.67■■□□□ 1.22
COL15A1-201ENST00000375001 VGLL3A8MV65 326 aa22.66■■□□□ 1.22
COL15A1-201ENST00000375001 KLHL34Q8N239 644 aa22.66■■□□□ 1.22
COL15A1-201ENST00000375001 IKBKGQ9Y6K9 419 aa22.66■■□□□ 1.22
COL15A1-201ENST00000375001 STRN4Q9NRL3 753 aa22.66■■□□□ 1.22
COL15A1-201ENST00000375001 MBIPQ9NS73 344 aa22.66■■□□□ 1.22
COL15A1-201ENST00000375001 TNNQ9UQP3 1299 aa22.66■■□□□ 1.22
COL15A1-201ENST00000375001 DHX29Q7Z478 1369 aaKnown RBP22.66■■□□□ 1.22
COL15A1-201ENST00000375001 TMX3Q96JJ7 454 aa22.66■■□□□ 1.22
COL15A1-201ENST00000375001 CNPY2Q9Y2B0 182 aa22.66■■□□□ 1.22
COL15A1-201ENST00000375001 SEC63Q9UGP8 760 aaKnown RBP22.66■■□□□ 1.22
COL15A1-201ENST00000375001 KIAA0586Q9BVV6 1533 aa22.66■■□□□ 1.22
COL15A1-201ENST00000375001 SCAF11Q99590 1463 aaKnown RBP22.65■■□□□ 1.22
COL15A1-201ENST00000375001 SLC12A7Q9Y666 1083 aa22.65■■□□□ 1.22
COL15A1-201ENST00000375001 PTPRKQ15262 1439 aa22.65■■□□□ 1.22
COL15A1-201ENST00000375001 FAM83GA6ND36 823 aa22.65■■□□□ 1.22
COL15A1-201ENST00000375001 IDEP14735 1019 aa22.65■■□□□ 1.22
COL15A1-201ENST00000375001 SSRP1Q08945 709 aaKnown RBP22.65■■□□□ 1.22
COL15A1-201ENST00000375001 ABCF2Q9UG63 623 aa22.65■■□□□ 1.22
COL15A1-201ENST00000375001 U2AF2P26368 475 aaKnown RBP eCLIP22.65■■□□□ 1.22
COL15A1-201ENST00000375001 NAP1L3Q99457 506 aaPredicted RBP22.65■■□□□ 1.22
COL15A1-201ENST00000375001 TRIM21P19474 475 aaKnown RBP22.65■■□□□ 1.22
COL15A1-201ENST00000375001 USP48Q86UV5 1035 aa22.65■■□□□ 1.22
COL15A1-201ENST00000375001 KIF20AO95235 890 aa22.64■■□□□ 1.22
COL15A1-201ENST00000375001 CPLX4Q7Z7G2 160 aa22.64■■□□□ 1.22
COL15A1-201ENST00000375001 IQGAP2Q13576 1575 aa22.64■■□□□ 1.22
COL15A1-201ENST00000375001 ZSCAN22P10073 491 aaPredicted RBP22.64■■□□□ 1.22
COL15A1-201ENST00000375001 FERP16591 822 aa22.64■■□□□ 1.22
COL15A1-201ENST00000375001 SYT1P21579 422 aa22.64■■□□□ 1.22
COL15A1-201ENST00000375001 PLB1Q6P1J6 1458 aa22.64■■□□□ 1.22
COL15A1-201ENST00000375001 MRC2Q9UBG0 1479 aa22.64■■□□□ 1.22
COL15A1-201ENST00000375001 ABCA10Q8WWZ4 1543 aa22.64■■□□□ 1.22
COL15A1-201ENST00000375001 DNAJC25Q9H1X3 360 aa22.64■■□□□ 1.21
COL15A1-201ENST00000375001 SDSP20132 328 aa22.64■■□□□ 1.21
COL15A1-201ENST00000375001 SELENOSQ9BQE4 189 aa22.64■■□□□ 1.21
COL15A1-201ENST00000375001 DDX23Q9BUQ8 820 aaKnown RBP22.64■■□□□ 1.21
COL15A1-201ENST00000375001 GOLGA8AA7E2F4 631 aa22.64■■□□□ 1.21
COL15A1-201ENST00000375001 SEC24BO95487 1268 aa22.64■■□□□ 1.21
COL15A1-201ENST00000375001 CTCFLQ8NI51 663 aaPredicted RBP22.63■■□□□ 1.21
COL15A1-201ENST00000375001 RAB34Q9BZG1 259 aa22.63■■□□□ 1.21
COL15A1-201ENST00000375001 HMGXB3Q12766 1538 aa22.63■■□□□ 1.21
COL15A1-201ENST00000375001 A0A1B0GUA9 196 aa22.63■■□□□ 1.21
COL15A1-201ENST00000375001 CTAGE9A4FU28 777 aa22.63■■□□□ 1.21
COL15A1-201ENST00000375001 MPHOSPH10O00566 681 aaKnown RBP22.63■■□□□ 1.21
COL15A1-201ENST00000375001 FLIIQ13045 1269 aa22.63■■□□□ 1.21
COL15A1-201ENST00000375001 WDR66Q8TBY9 1149 aa22.63■■□□□ 1.21
COL15A1-201ENST00000375001 CCDC194A0A1B0GVG4 234 aa22.63■■□□□ 1.21
COL15A1-201ENST00000375001 FAM114A1Q8IWE2 563 aa22.63■■□□□ 1.21
COL15A1-201ENST00000375001 ZSCAN29Q8IWY8 852 aaPredicted RBP22.63■■□□□ 1.21
COL15A1-201ENST00000375001 NAPBQ9H115 298 aa22.63■■□□□ 1.21
COL15A1-201ENST00000375001 PUF60Q9UHX1 559 aaKnown RBP22.63■■□□□ 1.21
COL15A1-201ENST00000375001 PTPRCP08575 1304 aa22.63■■□□□ 1.21
COL15A1-201ENST00000375001 AOPEPQ8N6M6 819 aa22.62■■□□□ 1.21
COL15A1-201ENST00000375001 RHOXF2BP0C7M4 288 aa22.62■■□□□ 1.21
COL15A1-201ENST00000375001 CYLC1P35663 651 aaPredicted RBP22.62■■□□□ 1.21
COL15A1-201ENST00000375001 SARNPP82979 210 aaKnown RBP22.62■■□□□ 1.21
COL15A1-201ENST00000375001 ZBTB16Q05516 673 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms