RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 CCDC129Q6ZRS4 1044 aa20.49■□□□□ 0.87
RXRB-201ENST00000374680 ERC1Q8IUD2 1116 aa20.49■□□□□ 0.87
RXRB-201ENST00000374680 CCDC85AQ96PX6 553 aaPredicted RBP20.49■□□□□ 0.87
RXRB-201ENST00000374680 WDR33Q9C0J8 1336 aaKnown RBP20.49■□□□□ 0.87
RXRB-201ENST00000374680 CHD2O14647 1828 aaKnown RBP20.49■□□□□ 0.87
RXRB-201ENST00000374680 PLCB2Q00722 1185 aa20.49■□□□□ 0.87
RXRB-201ENST00000374680 ZNF589Q86UQ0 364 aaPredicted RBP20.49■□□□□ 0.87
RXRB-201ENST00000374680 SEC62Q99442 399 aaKnown RBP20.49■□□□□ 0.87
RXRB-201ENST00000374680 CYP46A1Q9Y6A2 500 aa20.49■□□□□ 0.87
RXRB-201ENST00000374680 STX6O43752 255 aa20.48■□□□□ 0.87
RXRB-201ENST00000374680 CREB3L3Q68CJ9 461 aa20.48■□□□□ 0.87
RXRB-201ENST00000374680 NEUROD6Q96NK8 337 aa20.48■□□□□ 0.87
RXRB-201ENST00000374680 ZKSCAN1P17029 563 aaPredicted RBP20.47■□□□□ 0.87
RXRB-201ENST00000374680 LRSAM1Q6UWE0 723 aa20.47■□□□□ 0.87
RXRB-201ENST00000374680 ME3Q16798 604 aa20.47■□□□□ 0.87
RXRB-201ENST00000374680 CACNA1FO60840 1977 aa20.47■□□□□ 0.87
RXRB-201ENST00000374680 METTL22Q9BUU2 404 aaPredicted RBP20.47■□□□□ 0.87
RXRB-201ENST00000374680 CCDC171Q6TFL3 1326 aa20.46■□□□□ 0.87
RXRB-201ENST00000374680 DNM1Q05193 864 aaKnown RBP20.46■□□□□ 0.87
RXRB-201ENST00000374680 DDX46Q7L014 1031 aaKnown RBP20.46■□□□□ 0.87
RXRB-201ENST00000374680 LRRC2Q9BYS8 371 aa20.46■□□□□ 0.87
RXRB-201ENST00000374680 SNRPA1P09661 255 aaKnown RBP20.46■□□□□ 0.87
RXRB-201ENST00000374680 ZBTB3Q9H5J0 574 aa20.46■□□□□ 0.87
RXRB-201ENST00000374680 TMEM94Q12767 1356 aa20.46■□□□□ 0.87
RXRB-201ENST00000374680 C1orf167Q5SNV9 1468 aa20.46■□□□□ 0.87
RXRB-201ENST00000374680 A1BGP04217 495 aa20.45■□□□□ 0.86
RXRB-201ENST00000374680 ZSCAN22P10073 491 aaPredicted RBP20.45■□□□□ 0.86
RXRB-201ENST00000374680 FOSBP53539 338 aa20.45■□□□□ 0.86
RXRB-201ENST00000374680 STRN4Q9NRL3 753 aa20.45■□□□□ 0.86
RXRB-201ENST00000374680 RPAP1Q9BWH6 1393 aaPredicted RBP20.45■□□□□ 0.86
RXRB-201ENST00000374680 LMBR1LQ6UX01 489 aa20.45■□□□□ 0.86
RXRB-201ENST00000374680 DBNDD2Q9BQY9 259 aa20.45■□□□□ 0.86
RXRB-201ENST00000374680 TPCN1Q9ULQ1 816 aa20.45■□□□□ 0.86
RXRB-201ENST00000374680 MBD3O95983 291 aa20.44■□□□□ 0.86
RXRB-201ENST00000374680 TTLL7Q6ZT98 887 aa20.44■□□□□ 0.86
RXRB-201ENST00000374680 DBNLQ9UJU6 430 aaKnown RBP20.44■□□□□ 0.86
RXRB-201ENST00000374680 KDM6AO15550 1401 aaPredicted RBP20.44■□□□□ 0.86
RXRB-201ENST00000374680 MSNP26038 577 aaKnown RBP20.44■□□□□ 0.86
RXRB-201ENST00000374680 NECTIN1Q15223 517 aa20.44■□□□□ 0.86
RXRB-201ENST00000374680 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.44■□□□□ 0.86
RXRB-201ENST00000374680 SLC27A2O14975 620 aa20.43■□□□□ 0.86
RXRB-201ENST00000374680 TOM1L2Q6ZVM7 507 aa20.43■□□□□ 0.86
RXRB-201ENST00000374680 HDAC5Q9UQL6 1122 aa20.43■□□□□ 0.86
RXRB-201ENST00000374680 TCHHQ07283 1943 aa20.43■□□□□ 0.86
RXRB-201ENST00000374680 HEG1Q9ULI3 1381 aa20.43■□□□□ 0.86
RXRB-201ENST00000374680 TIMM10P62072 90 aa20.43■□□□□ 0.86
RXRB-201ENST00000374680 ZNF594Q96JF6 807 aaPredicted RBP20.43■□□□□ 0.86
RXRB-201ENST00000374680 FMNL2Q96PY5 1086 aa20.43■□□□□ 0.86
RXRB-201ENST00000374680 PPP1R9BQ96SB3 815 aa20.43■□□□□ 0.86
RXRB-201ENST00000374680 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.42■□□□□ 0.86
RXRB-201ENST00000374680 MEGF6O75095 1541 aa20.42■□□□□ 0.86
RXRB-201ENST00000374680 PTPN12Q05209 780 aaKnown RBP20.42■□□□□ 0.86
RXRB-201ENST00000374680 ST3GAL1Q11201 340 aa20.42■□□□□ 0.86
RXRB-201ENST00000374680 TAOK2Q9UL54 1235 aa20.42■□□□□ 0.86
RXRB-201ENST00000374680 TSPY26PQ9H489 355 aa20.41■□□□□ 0.86
RXRB-201ENST00000374680 NAP1L2Q9ULW6 460 aaPredicted RBP20.41■□□□□ 0.86
RXRB-201ENST00000374680 F13A1P00488 732 aa20.41■□□□□ 0.86
RXRB-201ENST00000374680 PTMAP06454 111 aaKnown RBP20.41■□□□□ 0.86
RXRB-201ENST00000374680 ZSWIM6Q9HCJ5 1215 aa20.41■□□□□ 0.86
RXRB-201ENST00000374680 PRDM11Q9NQV5 511 aa20.41■□□□□ 0.86
RXRB-201ENST00000374680 TFIP11Q9UBB9 837 aaKnown RBP20.41■□□□□ 0.86
RXRB-201ENST00000374680 RGPD5Q99666 1765 aa20.41■□□□□ 0.86
RXRB-201ENST00000374680 USP42Q9H9J4 1324 aaKnown RBP20.41■□□□□ 0.86
RXRB-201ENST00000374680 LARP1BQ659C4 914 aaKnown RBP20.4■□□□□ 0.86
RXRB-201ENST00000374680 GIMAP6Q6P9H5 292 aa20.4■□□□□ 0.86
RXRB-201ENST00000374680 DCAF5Q96JK2 942 aa20.4■□□□□ 0.86
RXRB-201ENST00000374680 BLOC1S2Q6QNY1 142 aa20.4■□□□□ 0.86
RXRB-201ENST00000374680 MAP4K1Q92918 833 aa20.4■□□□□ 0.86
RXRB-201ENST00000374680 MED1Q15648 1581 aaPredicted RBP20.4■□□□□ 0.86
RXRB-201ENST00000374680 ZSCAN30Q86W11 494 aa20.4■□□□□ 0.86
RXRB-201ENST00000374680 TNNI3KQ59H18 835 aa20.39■□□□□ 0.85
RXRB-201ENST00000374680 ZNF830Q96NB3 372 aaPredicted RBP20.39■□□□□ 0.85
RXRB-201ENST00000374680 FPGT-TNNI3KV9GXZ4 949 aa20.39■□□□□ 0.85
RXRB-201ENST00000374680 NBPF26B4DH59 902 aa20.39■□□□□ 0.85
RXRB-201ENST00000374680 NBPF14Q5TI25 921 aa20.39■□□□□ 0.85
RXRB-201ENST00000374680 VPS53Q5VIR6 699 aa20.39■□□□□ 0.85
RXRB-201ENST00000374680 NBPF10Q6P3W6 841 aaKnown RBP20.39■□□□□ 0.85
RXRB-201ENST00000374680 NBPF15Q8N660 670 aa20.39■□□□□ 0.85
RXRB-201ENST00000374680 DDX11Q96FC9 970 aa20.39■□□□□ 0.85
RXRB-201ENST00000374680 HCLS1P14317 486 aaPredicted RBP20.38■□□□□ 0.85
RXRB-201ENST00000374680 MTMR6Q9Y217 621 aa20.38■□□□□ 0.85
RXRB-201ENST00000374680 FGD1P98174 961 aa20.38■□□□□ 0.85
RXRB-201ENST00000374680 KAT6BQ8WYB5 2073 aa20.38■□□□□ 0.85
RXRB-201ENST00000374680 KDM3BQ7LBC6 1761 aa20.38■□□□□ 0.85
RXRB-201ENST00000374680 CDC37L1Q7L3B6 337 aa20.37■□□□□ 0.85
RXRB-201ENST00000374680 GOLIM4O00461 696 aa20.37■□□□□ 0.85
RXRB-201ENST00000374680 HSP90B1P14625 803 aaKnown RBP20.37■□□□□ 0.85
RXRB-201ENST00000374680 CAMK4Q16566 473 aa20.37■□□□□ 0.85
RXRB-201ENST00000374680 SYAP1Q96A49 352 aaPredicted RBP20.37■□□□□ 0.85
RXRB-201ENST00000374680 USP25Q9UHP3 1055 aa20.37■□□□□ 0.85
RXRB-201ENST00000374680 NCAPD2Q15021 1401 aa20.36■□□□□ 0.85
RXRB-201ENST00000374680 LRP10Q7Z4F1 713 aa20.36■□□□□ 0.85
RXRB-201ENST00000374680 SNRKQ9NRH2 765 aa20.36■□□□□ 0.85
RXRB-201ENST00000374680 UTYO14607 1347 aa20.36■□□□□ 0.85
RXRB-201ENST00000374680 A0A0G2JLW4 131 aa20.36■□□□□ 0.85
RXRB-201ENST00000374680 A0A0G2JS52 829 aa20.36■□□□□ 0.85
RXRB-201ENST00000374680 JAK2O60674 1132 aa20.35■□□□□ 0.85
RXRB-201ENST00000374680 RFX5P48382 616 aaPredicted RBP20.35■□□□□ 0.85
RXRB-201ENST00000374680 LRRC24Q50LG9 513 aa20.35■□□□□ 0.85
RXRB-201ENST00000374680 CHST3Q7LGC8 479 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms