RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 PI4KAP1Q8N8J0 262 aa22.16■■□□□ 1.14
PFDN6-201ENST00000374606 DNAAF4Q8WXU2 420 aa22.16■■□□□ 1.14
PFDN6-201ENST00000374606 COG6Q9Y2V7 657 aa22.16■■□□□ 1.14
PFDN6-201ENST00000374606 TNRC6CQ9HCJ0 1690 aaKnown RBP22.16■■□□□ 1.14
PFDN6-201ENST00000374606 COL15A1P39059 1388 aa22.15■■□□□ 1.14
PFDN6-201ENST00000374606 MVPQ14764 893 aaKnown RBP22.15■■□□□ 1.14
PFDN6-201ENST00000374606 KIF6Q6ZMV9 814 aa22.15■■□□□ 1.14
PFDN6-201ENST00000374606 RIC3Q7Z5B4 369 aa22.15■■□□□ 1.14
PFDN6-201ENST00000374606 ITPRIPQ8IWB1 547 aa22.15■■□□□ 1.14
PFDN6-201ENST00000374606 MAP3K2Q9Y2U5 619 aa22.15■■□□□ 1.14
PFDN6-201ENST00000374606 USP42Q9H9J4 1324 aaKnown RBP22.14■■□□□ 1.14
PFDN6-201ENST00000374606 EIF5P55010 431 aaKnown RBP22.14■■□□□ 1.13
PFDN6-201ENST00000374606 DDR1Q08345 913 aa22.14■■□□□ 1.13
PFDN6-201ENST00000374606 TTLL7Q6ZT98 887 aa22.14■■□□□ 1.13
PFDN6-201ENST00000374606 ANKRD13DQ6ZTN6 518 aa22.14■■□□□ 1.13
PFDN6-201ENST00000374606 SRP68Q9UHB9 627 aaKnown RBP22.14■■□□□ 1.13
PFDN6-201ENST00000374606 BCORQ6W2J9 1755 aa22.13■■□□□ 1.13
PFDN6-201ENST00000374606 CCT4P50991 539 aaKnown RBP22.13■■□□□ 1.13
PFDN6-201ENST00000374606 PLBD2Q8NHP8 589 aa22.13■■□□□ 1.13
PFDN6-201ENST00000374606 SCN7AQ01118 1682 aa22.12■■□□□ 1.13
PFDN6-201ENST00000374606 COL13A1Q5TAT6 717 aaPredicted RBP22.12■■□□□ 1.13
PFDN6-201ENST00000374606 INTS3Q68E01 1043 aaKnown RBP22.12■■□□□ 1.13
PFDN6-201ENST00000374606 RRAGCQ9HB90 399 aa22.12■■□□□ 1.13
PFDN6-201ENST00000374606 SBF1O95248 1867 aa22.11■■□□□ 1.13
PFDN6-201ENST00000374606 CHRNA5P30532 468 aa22.11■■□□□ 1.13
PFDN6-201ENST00000374606 DZIP3Q86Y13 1208 aaKnown RBP22.11■■□□□ 1.13
PFDN6-201ENST00000374606 EXOC6Q8TAG9 804 aa22.11■■□□□ 1.13
PFDN6-201ENST00000374606 ZBTB3Q9H5J0 574 aa22.11■■□□□ 1.13
PFDN6-201ENST00000374606 DDX19BQ9UMR2 479 aa22.11■■□□□ 1.13
PFDN6-201ENST00000374606 AFDNP55196 1824 aaKnown RBP22.1■■□□□ 1.13
PFDN6-201ENST00000374606 MAP3K15Q6ZN16 1313 aa22.1■■□□□ 1.13
PFDN6-201ENST00000374606 ANKRD36CQ5JPF3 1778 aa22.1■■□□□ 1.13
PFDN6-201ENST00000374606 A0A087WZG4 1122 aa22.1■■□□□ 1.13
PFDN6-201ENST00000374606 NEXNQ0ZGT2 675 aa22.1■■□□□ 1.13
PFDN6-201ENST00000374606 SMC1BQ8NDV3 1235 aa22.1■■□□□ 1.13
PFDN6-201ENST00000374606 GTF3C3Q9Y5Q9 886 aa22.1■■□□□ 1.13
PFDN6-201ENST00000374606 ERICH6BQ5W0A0 696 aa22.09■■□□□ 1.13
PFDN6-201ENST00000374606 METTL22Q9BUU2 404 aaPredicted RBP22.09■■□□□ 1.13
PFDN6-201ENST00000374606 SRCIN1Q9C0H9 1055 aa22.09■■□□□ 1.13
PFDN6-201ENST00000374606 ZC3H4Q9UPT8 1303 aaKnown RBP22.08■■□□□ 1.13
PFDN6-201ENST00000374606 POLRMTO00411 1230 aaKnown RBP22.08■■□□□ 1.13
PFDN6-201ENST00000374606 MYD88Q99836 296 aa22.08■■□□□ 1.13
PFDN6-201ENST00000374606 TBC1D2BQ9UPU7 963 aa22.08■■□□□ 1.13
PFDN6-201ENST00000374606 BEND3Q5T5X7 828 aa22.07■■□□□ 1.12
PFDN6-201ENST00000374606 LINS1Q8NG48 757 aa22.07■■□□□ 1.12
PFDN6-201ENST00000374606 CHMP4BQ9H444 224 aaKnown RBP22.07■■□□□ 1.12
PFDN6-201ENST00000374606 NUP98P52948 1817 aa22.07■■□□□ 1.12
PFDN6-201ENST00000374606 ERVV-1B6SEH8 477 aa22.06■■□□□ 1.12
PFDN6-201ENST00000374606 ALDH1L1O75891 902 aa22.06■■□□□ 1.12
PFDN6-201ENST00000374606 TM4SF1P30408 202 aa22.06■■□□□ 1.12
PFDN6-201ENST00000374606 TNS4Q8IZW8 715 aa22.06■■□□□ 1.12
PFDN6-201ENST00000374606 ZPR1O75312 459 aa22.05■■□□□ 1.12
PFDN6-201ENST00000374606 HSP90AB3PQ58FF7 597 aa22.05■■□□□ 1.12
PFDN6-201ENST00000374606 CAPN15O75808 1086 aa22.04■■□□□ 1.12
PFDN6-201ENST00000374606 CAMTA2O94983 1202 aa22.04■■□□□ 1.12
PFDN6-201ENST00000374606 RASSF7Q02833 373 aa22.04■■□□□ 1.12
PFDN6-201ENST00000374606 GIGYF2Q6Y7W6 1299 aaKnown RBP22.04■■□□□ 1.12
PFDN6-201ENST00000374606 IBTKQ9P2D0 1353 aaPredicted RBP22.03■■□□□ 1.12
PFDN6-201ENST00000374606 AAMPQ13685 434 aa22.03■■□□□ 1.12
PFDN6-201ENST00000374606 CWF19L2Q2TBE0 894 aaKnown RBP22.03■■□□□ 1.12
PFDN6-201ENST00000374606 USPL1Q5W0Q7 1092 aa22.03■■□□□ 1.12
PFDN6-201ENST00000374606 ZNF652Q9Y2D9 606 aa22.03■■□□□ 1.12
PFDN6-201ENST00000374606 NEURL1BA8MQ27 555 aa22.02■■□□□ 1.12
PFDN6-201ENST00000374606 IGKV5-2P06315 115 aa22.02■■□□□ 1.12
PFDN6-201ENST00000374606 LMNB1P20700 586 aa22.02■■□□□ 1.12
PFDN6-201ENST00000374606 TCIRG1Q13488 830 aa22.02■■□□□ 1.12
PFDN6-201ENST00000374606 HLFQ16534 295 aa22.02■■□□□ 1.12
PFDN6-201ENST00000374606 NARFQ9UHQ1 456 aa22.02■■□□□ 1.12
PFDN6-201ENST00000374606 ATP5J2-PTCD1G3V325 749 aa22.01■■□□□ 1.11
PFDN6-201ENST00000374606 ZBTB7BO15156 539 aaPredicted RBP22.01■■□□□ 1.11
PFDN6-201ENST00000374606 RGL2O15211 777 aa22.01■■□□□ 1.11
PFDN6-201ENST00000374606 VEGFAP15692 232 aaPredicted RBP22.01■■□□□ 1.11
PFDN6-201ENST00000374606 DLEC1Q9Y238 1755 aa22.01■■□□□ 1.11
PFDN6-201ENST00000374606 NRXN2Q9P2S2 1712 aa22■■□□□ 1.11
PFDN6-201ENST00000374606 GLTPD2A6NH11 291 aa22■■□□□ 1.11
PFDN6-201ENST00000374606 MEIS3Q99687 375 aa22■■□□□ 1.11
PFDN6-201ENST00000374606 GNAI3P08754 354 aa21.99■■□□□ 1.11
PFDN6-201ENST00000374606 PRELPP51888 382 aa21.99■■□□□ 1.11
PFDN6-201ENST00000374606 NFIXQ14938 502 aa21.99■■□□□ 1.11
PFDN6-201ENST00000374606 ISCA1Q9BUE6 129 aa21.99■■□□□ 1.11
PFDN6-201ENST00000374606 ZBTB40Q9NUA8 1239 aa21.99■■□□□ 1.11
PFDN6-201ENST00000374606 TIAM2Q8IVF5 1701 aa21.99■■□□□ 1.11
PFDN6-201ENST00000374606 PCNTO95613 3336 aa21.98■■□□□ 1.11
PFDN6-201ENST00000374606 GCKRQ14397 625 aa21.98■■□□□ 1.11
PFDN6-201ENST00000374606 CLEC4GQ6UXB4 293 aa21.98■■□□□ 1.11
PFDN6-201ENST00000374606 CWC25Q9NXE8 425 aaPredicted RBP21.98■■□□□ 1.11
PFDN6-201ENST00000374606 C9orf78Q9NZ63 289 aaPredicted RBP21.98■■□□□ 1.11
PFDN6-201ENST00000374606 GRM8O00222 908 aa21.97■■□□□ 1.11
PFDN6-201ENST00000374606 UBTFL1P0CB47 393 aaPredicted RBP21.97■■□□□ 1.11
PFDN6-201ENST00000374606 HSPA1AP0DMV8 641 aaKnown RBP21.97■■□□□ 1.11
PFDN6-201ENST00000374606 HSPA1BP0DMV9 641 aaKnown RBP21.97■■□□□ 1.11
PFDN6-201ENST00000374606 GPTP24298 496 aa21.97■■□□□ 1.11
PFDN6-201ENST00000374606 TTLL6Q8N841 843 aa21.97■■□□□ 1.11
PFDN6-201ENST00000374606 CCDC191Q8NCU4 936 aa21.97■■□□□ 1.11
PFDN6-201ENST00000374606 USP44Q9H0E7 712 aa21.97■■□□□ 1.11
PFDN6-201ENST00000374606 TRIM28Q13263 835 aaKnown RBP21.96■■□□□ 1.11
PFDN6-201ENST00000374606 PPP4R2Q9NY27 417 aa21.96■■□□□ 1.11
PFDN6-201ENST00000374606 CCDC88AQ3V6T2 1871 aa21.95■■□□□ 1.1
PFDN6-201ENST00000374606 SERPINB2P05120 415 aa21.95■■□□□ 1.1
PFDN6-201ENST00000374606 ZNF34Q8IZ26 560 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms