RNA–Protein interactions for RNA: ENST00000374595.8

CTNNAL1-204, Transcript of catenin alpha like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTNNAL1, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNAL1-204ENST00000374595 RUFY3Q7L099 469 aa20.89■□□□□ 0.94
CTNNAL1-204ENST00000374595 A0A0D9SFI3 127 aa20.89■□□□□ 0.93
CTNNAL1-204ENST00000374595 BRD1O95696 1058 aa20.89■□□□□ 0.93
CTNNAL1-204ENST00000374595 JAKMIP1Q96N16 626 aaKnown RBP20.89■□□□□ 0.93
CTNNAL1-204ENST00000374595 ZNF330Q9Y3S2 320 aaPredicted RBP20.89■□□□□ 0.93
CTNNAL1-204ENST00000374595 PTMSP20962 102 aa20.88■□□□□ 0.93
CTNNAL1-204ENST00000374595 TFCP2Q12800 502 aa20.88■□□□□ 0.93
CTNNAL1-204ENST00000374595 ZSCAN23Q3MJ62 389 aa20.88■□□□□ 0.93
CTNNAL1-204ENST00000374595 EVI5LQ96CN4 794 aa20.88■□□□□ 0.93
CTNNAL1-204ENST00000374595 TCEANC2Q96MN5 208 aa20.88■□□□□ 0.93
CTNNAL1-204ENST00000374595 HDAC5Q9UQL6 1122 aa20.88■□□□□ 0.93
CTNNAL1-204ENST00000374595 TAF6LQ9Y6J9 622 aa20.88■□□□□ 0.93
CTNNAL1-204ENST00000374595 TTC14Q96N46 770 aa20.88■□□□□ 0.93
CTNNAL1-204ENST00000374595 FSD1Q9BTV5 496 aa20.88■□□□□ 0.93
CTNNAL1-204ENST00000374595 ZCRB1Q8TBF4 217 aaKnown RBP20.87■□□□□ 0.93
CTNNAL1-204ENST00000374595 ZBTB3Q9H5J0 574 aa20.87■□□□□ 0.93
CTNNAL1-204ENST00000374595 ZNF335Q9H4Z2 1342 aaPredicted RBP20.87■□□□□ 0.93
CTNNAL1-204ENST00000374595 KCNJ4P48050 445 aa20.87■□□□□ 0.93
CTNNAL1-204ENST00000374595 PTPN12Q05209 780 aaKnown RBP20.87■□□□□ 0.93
CTNNAL1-204ENST00000374595 DCCP43146 1447 aa20.87■□□□□ 0.93
CTNNAL1-204ENST00000374595 FAM43AQ8N2R8 423 aa20.86■□□□□ 0.93
CTNNAL1-204ENST00000374595 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.86■□□□□ 0.93
CTNNAL1-204ENST00000374595 RUFY2Q8WXA3 655 aa20.86■□□□□ 0.93
CTNNAL1-204ENST00000374595 DBNLQ9UJU6 430 aaKnown RBP20.86■□□□□ 0.93
CTNNAL1-204ENST00000374595 ZNF589Q86UQ0 364 aaPredicted RBP20.85■□□□□ 0.93
CTNNAL1-204ENST00000374595 INTS4Q96HW7 963 aaKnown RBP20.85■□□□□ 0.93
CTNNAL1-204ENST00000374595 TMEM63CQ9P1W3 806 aa20.85■□□□□ 0.93
CTNNAL1-204ENST00000374595 RBM8AQ9Y5S9 174 aaKnown RBP20.85■□□□□ 0.93
CTNNAL1-204ENST00000374595 RFX5P48382 616 aaPredicted RBP20.85■□□□□ 0.93
CTNNAL1-204ENST00000374595 LMBR1LQ6UX01 489 aa20.85■□□□□ 0.93
CTNNAL1-204ENST00000374595 IL17RAQ96F46 866 aa20.85■□□□□ 0.93
CTNNAL1-204ENST00000374595 SLAIN2Q9P270 581 aa20.85■□□□□ 0.93
CTNNAL1-204ENST00000374595 WDR17Q8IZU2 1322 aa20.84■□□□□ 0.93
CTNNAL1-204ENST00000374595 CCDC171Q6TFL3 1326 aa20.84■□□□□ 0.93
CTNNAL1-204ENST00000374595 TCHHQ07283 1943 aa20.84■□□□□ 0.93
CTNNAL1-204ENST00000374595 CCDC83Q8IWF9 413 aa20.84■□□□□ 0.93
CTNNAL1-204ENST00000374595 DNAJC2Q99543 621 aaKnown RBP20.84■□□□□ 0.93
CTNNAL1-204ENST00000374595 KAT6BQ8WYB5 2073 aa20.84■□□□□ 0.93
CTNNAL1-204ENST00000374595 SLFNL1Q499Z3 407 aa20.83■□□□□ 0.93
CTNNAL1-204ENST00000374595 DBNDD2Q9BQY9 259 aa20.83■□□□□ 0.93
CTNNAL1-204ENST00000374595 PRIM1P49642 420 aaKnown RBP20.83■□□□□ 0.92
CTNNAL1-204ENST00000374595 NECAB1Q8N987 351 aa20.83■□□□□ 0.92
CTNNAL1-204ENST00000374595 CPDO75976 1380 aa20.83■□□□□ 0.92
CTNNAL1-204ENST00000374595 AFDNP55196 1824 aaKnown RBP20.82■□□□□ 0.92
CTNNAL1-204ENST00000374595 GADD45BO75293 160 aaPredicted RBP20.82■□□□□ 0.92
CTNNAL1-204ENST00000374595 LIMCH1Q9UPQ0 1083 aa20.82■□□□□ 0.92
CTNNAL1-204ENST00000374595 SYCE3A1L190 88 aa20.82■□□□□ 0.92
CTNNAL1-204ENST00000374595 NASPP49321 788 aaPredicted RBP20.82■□□□□ 0.92
CTNNAL1-204ENST00000374595 NECTIN1Q15223 517 aa20.82■□□□□ 0.92
CTNNAL1-204ENST00000374595 TNNI3KQ59H18 835 aa20.82■□□□□ 0.92
CTNNAL1-204ENST00000374595 PLBD2Q8NHP8 589 aa20.82■□□□□ 0.92
CTNNAL1-204ENST00000374595 PDRG1Q9NUG6 133 aa20.82■□□□□ 0.92
CTNNAL1-204ENST00000374595 FPGT-TNNI3KV9GXZ4 949 aa20.82■□□□□ 0.92
CTNNAL1-204ENST00000374595 XIRP1Q702N8 1843 aaKnown RBP20.82■□□□□ 0.92
CTNNAL1-204ENST00000374595 CREB3L3Q68CJ9 461 aa20.81■□□□□ 0.92
CTNNAL1-204ENST00000374595 CCDC129Q6ZRS4 1044 aa20.81■□□□□ 0.92
CTNNAL1-204ENST00000374595 SEC62Q99442 399 aaKnown RBP20.81■□□□□ 0.92
CTNNAL1-204ENST00000374595 RPAP1Q9BWH6 1393 aaPredicted RBP20.81■□□□□ 0.92
CTNNAL1-204ENST00000374595 PCDH11XQ9BZA7 1347 aa20.81■□□□□ 0.92
CTNNAL1-204ENST00000374595 PCDH11YQ9BZA8 1340 aa20.81■□□□□ 0.92
CTNNAL1-204ENST00000374595 ZNF594Q96JF6 807 aaPredicted RBP20.81■□□□□ 0.92
CTNNAL1-204ENST00000374595 CCDC85AQ96PX6 553 aaPredicted RBP20.81■□□□□ 0.92
CTNNAL1-204ENST00000374595 COPRSQ9NQ92 184 aa20.81■□□□□ 0.92
CTNNAL1-204ENST00000374595 MRC1P22897 1456 aa20.81■□□□□ 0.92
CTNNAL1-204ENST00000374595 LMTK3Q96Q04 1460 aa20.81■□□□□ 0.92
CTNNAL1-204ENST00000374595 CASP7P55210 303 aa20.8■□□□□ 0.92
CTNNAL1-204ENST00000374595 EVA1CP58658 441 aa20.8■□□□□ 0.92
CTNNAL1-204ENST00000374595 DDX46Q7L014 1031 aaKnown RBP20.8■□□□□ 0.92
CTNNAL1-204ENST00000374595 RBSNQ9H1K0 784 aa20.8■□□□□ 0.92
CTNNAL1-204ENST00000374595 ERBB4Q15303 1308 aa20.8■□□□□ 0.92
CTNNAL1-204ENST00000374595 EPB41L2O43491 1005 aaKnown RBP20.79■□□□□ 0.92
CTNNAL1-204ENST00000374595 PKD1L3Q7Z443 1732 aa20.79■□□□□ 0.92
CTNNAL1-204ENST00000374595 IL2RBP14784 551 aa20.79■□□□□ 0.92
CTNNAL1-204ENST00000374595 SYT1P21579 422 aa20.79■□□□□ 0.92
CTNNAL1-204ENST00000374595 MAP4K1Q92918 833 aa20.79■□□□□ 0.92
CTNNAL1-204ENST00000374595 NEUROD6Q96NK8 337 aa20.79■□□□□ 0.92
CTNNAL1-204ENST00000374595 CYP46A1Q9Y6A2 500 aa20.79■□□□□ 0.92
CTNNAL1-204ENST00000374595 ARFGEF2Q9Y6D5 1785 aa20.79■□□□□ 0.92
CTNNAL1-204ENST00000374595 SLC27A2O14975 620 aa20.78■□□□□ 0.92
CTNNAL1-204ENST00000374595 TIMM10P62072 90 aa20.78■□□□□ 0.92
CTNNAL1-204ENST00000374595 ISY1Q9ULR0 285 aaKnown RBP20.78■□□□□ 0.92
CTNNAL1-204ENST00000374595 ZKSCAN1P17029 563 aaPredicted RBP20.78■□□□□ 0.92
CTNNAL1-204ENST00000374595 ST3GAL1Q11201 340 aa20.78■□□□□ 0.92
CTNNAL1-204ENST00000374595 ME3Q16798 604 aa20.78■□□□□ 0.92
CTNNAL1-204ENST00000374595 USP48Q86UV5 1035 aa20.78■□□□□ 0.92
CTNNAL1-204ENST00000374595 CNPY2Q9Y2B0 182 aa20.78■□□□□ 0.92
CTNNAL1-204ENST00000374595 GLI3P10071 1580 aa20.77■□□□□ 0.92
CTNNAL1-204ENST00000374595 FOXO4P98177 505 aa20.77■□□□□ 0.92
CTNNAL1-204ENST00000374595 RABL6Q3YEC7 729 aaPredicted RBP20.77■□□□□ 0.92
CTNNAL1-204ENST00000374595 ANO8Q9HCE9 1232 aaPredicted RBP20.77■□□□□ 0.92
CTNNAL1-204ENST00000374595 ZSWIM6Q9HCJ5 1215 aa20.77■□□□□ 0.92
CTNNAL1-204ENST00000374595 SMC3Q9UQE7 1217 aa20.77■□□□□ 0.92
CTNNAL1-204ENST00000374595 COL5A2P05997 1499 aaPredicted RBP20.77■□□□□ 0.92
CTNNAL1-204ENST00000374595 COL15A1P39059 1388 aa20.77■□□□□ 0.92
CTNNAL1-204ENST00000374595 ZNF445P59923 1031 aa20.77■□□□□ 0.92
CTNNAL1-204ENST00000374595 TPCN1Q9ULQ1 816 aa20.77■□□□□ 0.92
CTNNAL1-204ENST00000374595 GJB2P29033 226 aa20.76■□□□□ 0.91
CTNNAL1-204ENST00000374595 LRRC24Q50LG9 513 aa20.76■□□□□ 0.91
CTNNAL1-204ENST00000374595 WDR33Q9C0J8 1336 aaKnown RBP20.76■□□□□ 0.91
CTNNAL1-204ENST00000374595 SOS2Q07890 1332 aaPredicted RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms