RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 CWC25Q9NXE8 425 aaPredicted RBP15.4■□□□□ 0.06
PRPF4-202ENST00000374199 PA2G4Q9UQ80 394 aaKnown RBP15.4■□□□□ 0.06
PRPF4-202ENST00000374199 MAP3K15Q6ZN16 1313 aa15.4■□□□□ 0.06
PRPF4-202ENST00000374199 TSHZ3Q63HK5 1081 aa15.4■□□□□ 0.06
PRPF4-202ENST00000374199 MARCH10Q8NA82 808 aaPredicted RBP15.4■□□□□ 0.06
PRPF4-202ENST00000374199 ZNF609O15014 1411 aa15.4■□□□□ 0.06
PRPF4-202ENST00000374199 APBB1O00213 710 aa15.39■□□□□ 0.06
PRPF4-202ENST00000374199 RGL2O15211 777 aa15.39■□□□□ 0.06
PRPF4-202ENST00000374199 EAF2Q96CJ1 260 aaPredicted RBP15.39■□□□□ 0.06
PRPF4-202ENST00000374199 ECHDC1Q9NTX5 307 aa15.39■□□□□ 0.06
PRPF4-202ENST00000374199 FBXO3Q9UK99 471 aa15.39■□□□□ 0.06
PRPF4-202ENST00000374199 SPATA31A6Q5VVP1 1343 aa15.39■□□□□ 0.05
PRPF4-202ENST00000374199 ERVV-1B6SEH8 477 aa15.39■□□□□ 0.05
PRPF4-202ENST00000374199 CIAO1O76071 339 aa15.39■□□□□ 0.05
PRPF4-202ENST00000374199 NUTM1Q86Y26 1132 aa15.39■□□□□ 0.05
PRPF4-202ENST00000374199 DNAJC10Q8IXB1 793 aa15.39■□□□□ 0.05
PRPF4-202ENST00000374199 IL25Q9H293 177 aa15.39■□□□□ 0.05
PRPF4-202ENST00000374199 CSF1RP07333 972 aa15.39■□□□□ 0.05
PRPF4-202ENST00000374199 ATG9AQ7Z3C6 839 aa15.38■□□□□ 0.05
PRPF4-202ENST00000374199 CLASRPQ8N2M8 674 aaKnown RBP15.38■□□□□ 0.05
PRPF4-202ENST00000374199 A0A087WZG4 1122 aa15.38■□□□□ 0.05
PRPF4-202ENST00000374199 SGSM2O43147 1006 aa15.38■□□□□ 0.05
PRPF4-202ENST00000374199 STARD3NLO95772 234 aa15.38■□□□□ 0.05
PRPF4-202ENST00000374199 PCCAP05165 728 aaPredicted RBP15.38■□□□□ 0.05
PRPF4-202ENST00000374199 IL6STP40189 918 aaPredicted RBP15.38■□□□□ 0.05
PRPF4-202ENST00000374199 GIGYF2Q6Y7W6 1299 aaKnown RBP15.38■□□□□ 0.05
PRPF4-202ENST00000374199 UBE3BQ7Z3V4 1068 aa15.37■□□□□ 0.05
PRPF4-202ENST00000374199 PTCD1O75127 700 aaKnown RBP15.37■□□□□ 0.05
PRPF4-202ENST00000374199 INTS5Q6P9B9 1019 aaKnown RBP15.36■□□□□ 0.05
PRPF4-202ENST00000374199 CIZ1Q9ULV3 898 aaPredicted RBP15.36■□□□□ 0.05
PRPF4-202ENST00000374199 RAD50Q92878 1312 aa15.36■□□□□ 0.05
PRPF4-202ENST00000374199 LSG1Q9H089 658 aaKnown RBP15.36■□□□□ 0.05
PRPF4-202ENST00000374199 MED23Q9ULK4 1368 aa15.36■□□□□ 0.05
PRPF4-202ENST00000374199 HSPA4P34932 840 aa15.36■□□□□ 0.05
PRPF4-202ENST00000374199 NFKBIBQ15653 356 aa15.36■□□□□ 0.05
PRPF4-202ENST00000374199 CLEC17AQ6ZS10 378 aa15.36■□□□□ 0.05
PRPF4-202ENST00000374199 CNTROBQ8N137 903 aa15.36■□□□□ 0.05
PRPF4-202ENST00000374199 DOCK2Q92608 1830 aa15.35■□□□□ 0.05
PRPF4-202ENST00000374199 AKAP11Q9UKA4 1901 aa15.35■□□□□ 0.05
PRPF4-202ENST00000374199 ATP5J2-PTCD1G3V325 749 aa15.35■□□□□ 0.05
PRPF4-202ENST00000374199 K7ELQ4 463 aaPredicted RBP15.35■□□□□ 0.05
PRPF4-202ENST00000374199 EIF5P55010 431 aaKnown RBP15.35■□□□□ 0.05
PRPF4-202ENST00000374199 DDB1Q16531 1140 aa15.35■□□□□ 0.05
PRPF4-202ENST00000374199 RIC1Q4ADV7 1423 aa15.35■□□□□ 0.05
PRPF4-202ENST00000374199 ATP5JP18859 108 aa15.35■□□□□ 0.05
PRPF4-202ENST00000374199 ZBTB38Q8NAP3 1195 aaPredicted RBP15.35■□□□□ 0.05
PRPF4-202ENST00000374199 EVI5LQ96CN4 794 aa15.35■□□□□ 0.05
PRPF4-202ENST00000374199 MYH7P12883 1935 aa15.35■□□□□ 0.05
PRPF4-202ENST00000374199 C4AP0C0L4 1744 aa15.35■□□□□ 0.05
PRPF4-202ENST00000374199 C4BP0C0L5 1744 aa15.35■□□□□ 0.05
PRPF4-202ENST00000374199 ATRNO75882 1429 aa15.34■□□□□ 0.05
PRPF4-202ENST00000374199 G3BP1Q13283 466 aaKnown RBP eCLIP15.34■□□□□ 0.05
PRPF4-202ENST00000374199 TNNI3KQ59H18 835 aa15.34■□□□□ 0.05
PRPF4-202ENST00000374199 HSCBQ8IWL3 235 aa15.34■□□□□ 0.05
PRPF4-202ENST00000374199 FPGT-TNNI3KV9GXZ4 949 aa15.34■□□□□ 0.05
PRPF4-202ENST00000374199 ZNF34Q8IZ26 560 aa15.34■□□□□ 0.05
PRPF4-202ENST00000374199 ABCC12Q96J65 1359 aa15.34■□□□□ 0.05
PRPF4-202ENST00000374199 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.34■□□□□ 0.05
PRPF4-202ENST00000374199 AK7Q96M32 723 aa15.34■□□□□ 0.05
PRPF4-202ENST00000374199 TLR7Q9NYK1 1049 aaKnown RBP15.34■□□□□ 0.05
PRPF4-202ENST00000374199 DAXXQ9UER7 740 aaPredicted RBP15.34■□□□□ 0.05
PRPF4-202ENST00000374199 PRIM1P49642 420 aaKnown RBP15.33■□□□□ 0.04
PRPF4-202ENST00000374199 GPATCH3Q96I76 525 aa15.33■□□□□ 0.04
PRPF4-202ENST00000374199 RBM42Q9BTD8 480 aaKnown RBP15.33■□□□□ 0.04
PRPF4-202ENST00000374199 PALLDQ8WX93 1383 aa15.33■□□□□ 0.04
PRPF4-202ENST00000374199 DBNLQ9UJU6 430 aaKnown RBP15.33■□□□□ 0.04
PRPF4-202ENST00000374199 RTL9Q8NET4 1388 aa15.33■□□□□ 0.04
PRPF4-202ENST00000374199 HSP90AB3PQ58FF7 597 aa15.32■□□□□ 0.04
PRPF4-202ENST00000374199 AACSQ86V21 672 aa15.32■□□□□ 0.04
PRPF4-202ENST00000374199 ONECUT3O60422 494 aaPredicted RBP15.32■□□□□ 0.04
PRPF4-202ENST00000374199 NLRP10Q86W26 655 aa15.32■□□□□ 0.04
PRPF4-202ENST00000374199 LMBR1LQ6UX01 489 aa15.32■□□□□ 0.04
PRPF4-202ENST00000374199 KLHDC4Q8TBB5 520 aa15.32■□□□□ 0.04
PRPF4-202ENST00000374199 ZBTB1Q9Y2K1 713 aa15.32■□□□□ 0.04
PRPF4-202ENST00000374199 ZBTB3Q9H5J0 574 aa15.31■□□□□ 0.04
PRPF4-202ENST00000374199 ADAMTS2O95450 1211 aa15.31■□□□□ 0.04
PRPF4-202ENST00000374199 IFIT2P09913 472 aaKnown RBP15.31■□□□□ 0.04
PRPF4-202ENST00000374199 KIF6Q6ZMV9 814 aa15.31■□□□□ 0.04
PRPF4-202ENST00000374199 CHMP5Q9NZZ3 219 aa15.31■□□□□ 0.04
PRPF4-202ENST00000374199 CYP2E1P05181 493 aaPredicted RBP15.3■□□□□ 0.04
PRPF4-202ENST00000374199 IL15P40933 162 aaPredicted RBP15.3■□□□□ 0.04
PRPF4-202ENST00000374199 HLFQ16534 295 aa15.3■□□□□ 0.04
PRPF4-202ENST00000374199 TFCP2Q12800 502 aa15.3■□□□□ 0.04
PRPF4-202ENST00000374199 PALD1Q9ULE6 856 aa15.3■□□□□ 0.04
PRPF4-202ENST00000374199 UBN2Q6ZU65 1347 aa15.3■□□□□ 0.04
PRPF4-202ENST00000374199 HIP1O00291 1037 aa15.3■□□□□ 0.04
PRPF4-202ENST00000374199 HAUS7Q99871 368 aa15.3■□□□□ 0.04
PRPF4-202ENST00000374199 ITPK1Q13572 414 aa15.29■□□□□ 0.04
PRPF4-202ENST00000374199 LAMA4Q16363 1823 aa15.29■□□□□ 0.04
PRPF4-202ENST00000374199 EYA2O00167 538 aa15.29■□□□□ 0.04
PRPF4-202ENST00000374199 CUL4AQ13619 759 aa15.29■□□□□ 0.04
PRPF4-202ENST00000374199 RAB3GAP1Q15042 981 aa15.29■□□□□ 0.04
PRPF4-202ENST00000374199 RILPL2Q969X0 211 aa15.29■□□□□ 0.04
PRPF4-202ENST00000374199 CNTNAP4Q9C0A0 1308 aa15.29■□□□□ 0.04
PRPF4-202ENST00000374199 TRIM6-TRIM34B2RNG4 842 aa15.28■□□□□ 0.04
PRPF4-202ENST00000374199 RPAP1Q9BWH6 1393 aaPredicted RBP15.28■□□□□ 0.04
PRPF4-202ENST00000374199 COL4A1P02462 1669 aa15.28■□□□□ 0.04
PRPF4-202ENST00000374199 CAMTA2O94983 1202 aa15.28■□□□□ 0.04
PRPF4-202ENST00000374199 VGLL2Q8N8G2 317 aa15.28■□□□□ 0.04
PRPF4-202ENST00000374199 TTC14Q96N46 770 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms