RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 LDHAL6AQ6ZMR3 332 aa14.02□□□□□ -0.16
PACSIN1-202ENST00000374043 KIF2CQ99661 725 aa14.02□□□□□ -0.16
PACSIN1-202ENST00000374043 IFIT5Q13325 482 aaKnown RBP14.02□□□□□ -0.17
PACSIN1-202ENST00000374043 GCKRQ14397 625 aa14.02□□□□□ -0.17
PACSIN1-202ENST00000374043 GIMAP6Q6P9H5 292 aa14.02□□□□□ -0.17
PACSIN1-202ENST00000374043 TMEM131LA2VDJ0 1609 aa14.01□□□□□ -0.17
PACSIN1-202ENST00000374043 PREX1Q8TCU6 1659 aa14.01□□□□□ -0.17
PACSIN1-202ENST00000374043 KRT85P78386 507 aa14.01□□□□□ -0.17
PACSIN1-202ENST00000374043 SEC62Q99442 399 aaKnown RBP14.01□□□□□ -0.17
PACSIN1-202ENST00000374043 MPHOSPH8Q99549 860 aa14.01□□□□□ -0.17
PACSIN1-202ENST00000374043 CCDC173Q0VFZ6 552 aa14.01□□□□□ -0.17
PACSIN1-202ENST00000374043 SPATA32Q96LK8 384 aa14.01□□□□□ -0.17
PACSIN1-202ENST00000374043 FAM13BQ9NYF5 915 aa14.01□□□□□ -0.17
PACSIN1-202ENST00000374043 IBTKQ9P2D0 1353 aaPredicted RBP14.01□□□□□ -0.17
PACSIN1-202ENST00000374043 GOLGA6L19H0YKK7 550 aa14.01□□□□□ -0.17
PACSIN1-202ENST00000374043 PHKG2P15735 406 aa14.01□□□□□ -0.17
PACSIN1-202ENST00000374043 CREB3L3Q68CJ9 461 aa14.01□□□□□ -0.17
PACSIN1-202ENST00000374043 USP25Q9UHP3 1055 aa14.01□□□□□ -0.17
PACSIN1-202ENST00000374043 TMEM94Q12767 1356 aa14.01□□□□□ -0.17
PACSIN1-202ENST00000374043 PDCP20941 246 aa14.01□□□□□ -0.17
PACSIN1-202ENST00000374043 SDF4Q9BRK5 362 aa14.01□□□□□ -0.17
PACSIN1-202ENST00000374043 ABCF2Q9UG63 623 aa14.01□□□□□ -0.17
PACSIN1-202ENST00000374043 LRRFIP1Q32MZ4 808 aaKnown RBP14□□□□□ -0.17
PACSIN1-202ENST00000374043 SASS6Q6UVJ0 657 aa14□□□□□ -0.17
PACSIN1-202ENST00000374043 CCDC144CPQ8IYA2 1237 aa14□□□□□ -0.17
PACSIN1-202ENST00000374043 RRAGDQ9NQL2 400 aaPredicted RBP14□□□□□ -0.17
PACSIN1-202ENST00000374043 MED14O60244 1454 aa14□□□□□ -0.17
PACSIN1-202ENST00000374043 GADD45BO75293 160 aaPredicted RBP14□□□□□ -0.17
PACSIN1-202ENST00000374043 HCLS1P14317 486 aaPredicted RBP14□□□□□ -0.17
PACSIN1-202ENST00000374043 METTL22Q9BUU2 404 aaPredicted RBP14□□□□□ -0.17
PACSIN1-202ENST00000374043 NEURL1BA8MQ27 555 aa13.99□□□□□ -0.17
PACSIN1-202ENST00000374043 ME1P48163 572 aa13.99□□□□□ -0.17
PACSIN1-202ENST00000374043 BTG4Q9NY30 223 aa13.99□□□□□ -0.17
PACSIN1-202ENST00000374043 COL3A1P02461 1466 aaPredicted RBP13.99□□□□□ -0.17
PACSIN1-202ENST00000374043 SYT1P21579 422 aa13.99□□□□□ -0.17
PACSIN1-202ENST00000374043 ADCK5Q3MIX3 580 aa13.99□□□□□ -0.17
PACSIN1-202ENST00000374043 ZSCAN31Q96LW9 406 aaPredicted RBP13.99□□□□□ -0.17
PACSIN1-202ENST00000374043 ZNF830Q96NB3 372 aaPredicted RBP13.99□□□□□ -0.17
PACSIN1-202ENST00000374043 ARHGEF28Q8N1W1 1705 aaKnown RBP13.99□□□□□ -0.17
PACSIN1-202ENST00000374043 IL2RBP14784 551 aa13.99□□□□□ -0.17
PACSIN1-202ENST00000374043 PIBF1Q8WXW3 757 aa13.99□□□□□ -0.17
PACSIN1-202ENST00000374043 ZNF592Q92610 1267 aa13.99□□□□□ -0.17
PACSIN1-202ENST00000374043 SIGLEC1Q9BZZ2 1709 aa13.99□□□□□ -0.17
PACSIN1-202ENST00000374043 RBM10P98175 930 aaKnown RBP13.98□□□□□ -0.17
PACSIN1-202ENST00000374043 SLFNL1Q499Z3 407 aa13.98□□□□□ -0.17
PACSIN1-202ENST00000374043 CCDC73Q6ZRK6 1079 aa13.98□□□□□ -0.17
PACSIN1-202ENST00000374043 NEK1Q96PY6 1258 aa13.98□□□□□ -0.17
PACSIN1-202ENST00000374043 A0A0D9SFI3 127 aa13.98□□□□□ -0.17
PACSIN1-202ENST00000374043 CRB1P82279 1406 aa13.98□□□□□ -0.17
PACSIN1-202ENST00000374043 ERBB3P21860 1342 aa13.98□□□□□ -0.17
PACSIN1-202ENST00000374043 EXOC5O00471 708 aa13.98□□□□□ -0.17
PACSIN1-202ENST00000374043 ZSCAN22P10073 491 aaPredicted RBP13.98□□□□□ -0.17
PACSIN1-202ENST00000374043 ANAPC15P60006 121 aa13.98□□□□□ -0.17
PACSIN1-202ENST00000374043 CHAF1AQ13111 956 aaPredicted RBP13.98□□□□□ -0.17
PACSIN1-202ENST00000374043 ANKRD1Q15327 319 aa13.98□□□□□ -0.17
PACSIN1-202ENST00000374043 SYNE3Q6ZMZ3 975 aa13.98□□□□□ -0.17
PACSIN1-202ENST00000374043 DNAJC10Q8IXB1 793 aa13.98□□□□□ -0.17
PACSIN1-202ENST00000374043 TRIM5Q9C035 493 aa13.98□□□□□ -0.17
PACSIN1-202ENST00000374043 TNMDQ9H2S6 317 aa13.98□□□□□ -0.17
PACSIN1-202ENST00000374043 SLC4A8Q2Y0W8 1093 aa13.97□□□□□ -0.17
PACSIN1-202ENST00000374043 CCDC171Q6TFL3 1326 aa13.97□□□□□ -0.17
PACSIN1-202ENST00000374043 EPHA10Q5JZY3 1008 aa13.97□□□□□ -0.17
PACSIN1-202ENST00000374043 CPLX2Q6PUV4 134 aaKnown RBP13.97□□□□□ -0.17
PACSIN1-202ENST00000374043 RBSNQ9H1K0 784 aa13.97□□□□□ -0.17
PACSIN1-202ENST00000374043 TTC41PQ6P2S7 1318 aa13.97□□□□□ -0.17
PACSIN1-202ENST00000374043 HOXB7P09629 217 aa13.97□□□□□ -0.17
PACSIN1-202ENST00000374043 LMBRD1Q9NUN5 540 aa13.97□□□□□ -0.17
PACSIN1-202ENST00000374043 BABAM1Q9NWV8 329 aa13.97□□□□□ -0.17
PACSIN1-202ENST00000374043 KIF24Q5T7B8 1368 aa13.96□□□□□ -0.17
PACSIN1-202ENST00000374043 Q6ZUG5 572 aa13.96□□□□□ -0.17
PACSIN1-202ENST00000374043 IL25Q9H293 177 aa13.96□□□□□ -0.17
PACSIN1-202ENST00000374043 OVOS2A0A0J9YW53 1432 aa13.96□□□□□ -0.17
PACSIN1-202ENST00000374043 OVOS2Q6IE36 1432 aa13.96□□□□□ -0.17
PACSIN1-202ENST00000374043 TNNI3KQ59H18 835 aa13.96□□□□□ -0.17
PACSIN1-202ENST00000374043 FPGT-TNNI3KV9GXZ4 949 aa13.96□□□□□ -0.17
PACSIN1-202ENST00000374043 NUP133Q8WUM0 1156 aa13.96□□□□□ -0.18
PACSIN1-202ENST00000374043 RAD50Q92878 1312 aa13.96□□□□□ -0.18
PACSIN1-202ENST00000374043 MYO5BQ9ULV0 1848 aa13.95□□□□□ -0.18
PACSIN1-202ENST00000374043 HSPA4P34932 840 aa13.95□□□□□ -0.18
PACSIN1-202ENST00000374043 TRIM29Q14134 588 aa13.95□□□□□ -0.18
PACSIN1-202ENST00000374043 GLIPR1L2Q4G1C9 344 aa13.95□□□□□ -0.18
PACSIN1-202ENST00000374043 CYP27B1O15528 508 aa13.95□□□□□ -0.18
PACSIN1-202ENST00000374043 CHGBP05060 677 aa13.95□□□□□ -0.18
PACSIN1-202ENST00000374043 POLR3DP05423 398 aaPredicted RBP13.95□□□□□ -0.18
PACSIN1-202ENST00000374043 SH2B1Q9NRF2 756 aaPredicted RBP13.95□□□□□ -0.18
PACSIN1-202ENST00000374043 TMEM63CQ9P1W3 806 aa13.95□□□□□ -0.18
PACSIN1-202ENST00000374043 SLAIN2Q9P270 581 aa13.95□□□□□ -0.18
PACSIN1-202ENST00000374043 DIP2BQ9P265 1576 aa13.95□□□□□ -0.18
PACSIN1-202ENST00000374043 STK38Q15208 465 aa13.95□□□□□ -0.18
PACSIN1-202ENST00000374043 KRT32Q14532 448 aa13.95□□□□□ -0.18
PACSIN1-202ENST00000374043 AKAP17AQ02040 695 aaKnown RBP13.94□□□□□ -0.18
PACSIN1-202ENST00000374043 APOBRQ0VD83 1088 aa13.94□□□□□ -0.18
PACSIN1-202ENST00000374043 LRRC24Q50LG9 513 aa13.94□□□□□ -0.18
PACSIN1-202ENST00000374043 NUP62CLQ9H1M0 184 aa13.94□□□□□ -0.18
PACSIN1-202ENST00000374043 PAG1Q9NWQ8 432 aa13.94□□□□□ -0.18
PACSIN1-202ENST00000374043 LRP2BPQ9P2M1 347 aa13.94□□□□□ -0.18
PACSIN1-202ENST00000374043 NSFL1CQ9UNZ2 370 aaKnown RBP13.94□□□□□ -0.18
PACSIN1-202ENST00000374043 USP31Q70CQ4 1352 aa13.94□□□□□ -0.18
PACSIN1-202ENST00000374043 MAP2P11137 1827 aaKnown RBP13.94□□□□□ -0.18
PACSIN1-202ENST00000374043 SLC27A2O14975 620 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms