RNA–Protein interactions for RNA: ENST00000373381.8

CSMD2-205, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSMD2, Length 13,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-205ENST00000373381 ARID4AP29374 1257 aaPredicted RBP10.38□□□□□ -0.75
CSMD2-205ENST00000373381 CFAP70Q5T0N1 1121 aa10.38□□□□□ -0.75
CSMD2-205ENST00000373381 DPH6Q7L8W6 267 aa10.38□□□□□ -0.75
CSMD2-205ENST00000373381 VPS8Q8N3P4 1428 aa10.38□□□□□ -0.75
CSMD2-205ENST00000373381 C8orf76Q96K31 380 aa10.38□□□□□ -0.75
CSMD2-205ENST00000373381 STK10O94804 968 aaKnown RBP10.38□□□□□ -0.75
CSMD2-205ENST00000373381 JDP2Q8WYK2 163 aa10.38□□□□□ -0.75
CSMD2-205ENST00000373381 KIFC2Q96AC6 838 aa10.38□□□□□ -0.75
CSMD2-205ENST00000373381 PAIP2Q9BPZ3 127 aaKnown RBP10.38□□□□□ -0.75
CSMD2-205ENST00000373381 RAD54L2Q9Y4B4 1467 aa10.38□□□□□ -0.75
CSMD2-205ENST00000373381 KCNH5Q8NCM2 988 aa10.38□□□□□ -0.75
CSMD2-205ENST00000373381 KAT14Q9H8E8 782 aa10.38□□□□□ -0.75
CSMD2-205ENST00000373381 C6orf50Q9HD87 102 aa10.38□□□□□ -0.75
CSMD2-205ENST00000373381 ADAMTS2O95450 1211 aa10.37□□□□□ -0.75
CSMD2-205ENST00000373381 MAP3K11Q16584 847 aa10.37□□□□□ -0.75
CSMD2-205ENST00000373381 PANK1Q8TE04 598 aa10.37□□□□□ -0.75
CSMD2-205ENST00000373381 PRKAR2BP31323 418 aa10.37□□□□□ -0.75
CSMD2-205ENST00000373381 ANO10Q9NW15 660 aa10.37□□□□□ -0.75
CSMD2-205ENST00000373381 SSFA2P28290 1259 aa10.37□□□□□ -0.75
CSMD2-205ENST00000373381 TDRD9Q8NDG6 1382 aaKnown RBP10.37□□□□□ -0.75
CSMD2-205ENST00000373381 EEF2P13639 858 aaKnown RBP10.37□□□□□ -0.75
CSMD2-205ENST00000373381 MUM1L1Q5H9M0 696 aa10.37□□□□□ -0.75
CSMD2-205ENST00000373381 MRVI1Q9Y6F6 885 aa10.37□□□□□ -0.75
CSMD2-205ENST00000373381 PLCB4Q15147 1175 aa10.37□□□□□ -0.75
CSMD2-205ENST00000373381 XRCC6P12956 609 aaKnown RBP eCLIP10.37□□□□□ -0.75
CSMD2-205ENST00000373381 KANK3Q6NY19 840 aa10.37□□□□□ -0.75
CSMD2-205ENST00000373381 EP400NLQ6ZTU2 488 aa10.37□□□□□ -0.75
CSMD2-205ENST00000373381 SRGAP1Q7Z6B7 1085 aa10.37□□□□□ -0.75
CSMD2-205ENST00000373381 RPGRIP1LQ68CZ1 1315 aa10.37□□□□□ -0.75
CSMD2-205ENST00000373381 PSPC1Q8WXF1 523 aaKnown RBP10.37□□□□□ -0.75
CSMD2-205ENST00000373381 UBA7P41226 1012 aa10.37□□□□□ -0.75
CSMD2-205ENST00000373381 NBPF8Q3BBV2 869 aa10.36□□□□□ -0.75
CSMD2-205ENST00000373381 NBPF14Q5TI25 921 aa10.36□□□□□ -0.75
CSMD2-205ENST00000373381 MSL1Q68DK7 614 aa10.36□□□□□ -0.75
CSMD2-205ENST00000373381 FEZ2Q9UHY8 353 aaPredicted RBP10.36□□□□□ -0.75
CSMD2-205ENST00000373381 TACC3Q9Y6A5 838 aa10.36□□□□□ -0.75
CSMD2-205ENST00000373381 HSF2BPO75031 334 aa10.36□□□□□ -0.75
CSMD2-205ENST00000373381 ZNF569Q5MCW4 686 aa10.36□□□□□ -0.75
CSMD2-205ENST00000373381 LRPPRCP42704 1394 aaKnown RBP10.36□□□□□ -0.75
CSMD2-205ENST00000373381 TSPY2A6NKD2 308 aa10.36□□□□□ -0.75
CSMD2-205ENST00000373381 CCDC125Q86Z20 511 aa10.36□□□□□ -0.75
CSMD2-205ENST00000373381 FAM13AO94988 1023 aa10.36□□□□□ -0.75
CSMD2-205ENST00000373381 IDEP14735 1019 aa10.36□□□□□ -0.75
CSMD2-205ENST00000373381 ERICH4A6NGS2 130 aa10.36□□□□□ -0.75
CSMD2-205ENST00000373381 SARNPP82979 210 aaKnown RBP10.36□□□□□ -0.75
CSMD2-205ENST00000373381 CIZ1Q9ULV3 898 aaPredicted RBP10.36□□□□□ -0.75
CSMD2-205ENST00000373381 TRAK2O60296 914 aa10.36□□□□□ -0.75
CSMD2-205ENST00000373381 SPOUT1Q5T280 376 aaKnown RBP10.36□□□□□ -0.75
CSMD2-205ENST00000373381 HSPA4P34932 840 aa10.35□□□□□ -0.75
CSMD2-205ENST00000373381 NFE2L2Q16236 605 aa10.35□□□□□ -0.75
CSMD2-205ENST00000373381 FAM212AQ96EL1 285 aa10.35□□□□□ -0.75
CSMD2-205ENST00000373381 TRIM7Q9C029 511 aa10.35□□□□□ -0.75
CSMD2-205ENST00000373381 RMND1Q9NWS8 449 aa10.35□□□□□ -0.75
CSMD2-205ENST00000373381 TRMT112Q9UI30 125 aaKnown RBP10.35□□□□□ -0.75
CSMD2-205ENST00000373381 NSMCE1Q8WV22 266 aa10.35□□□□□ -0.75
CSMD2-205ENST00000373381 VAT1LQ9HCJ6 419 aa10.35□□□□□ -0.75
CSMD2-205ENST00000373381 PPP1R42Q7Z4L9 355 aa10.35□□□□□ -0.75
CSMD2-205ENST00000373381 CRNKL1Q9BZJ0 848 aaKnown RBP10.35□□□□□ -0.75
CSMD2-205ENST00000373381 STIM2Q9P246 746 aa10.35□□□□□ -0.75
CSMD2-205ENST00000373381 UTP14CQ5TAP6 766 aaKnown RBP10.35□□□□□ -0.75
CSMD2-205ENST00000373381 NBPF6Q5VWK0 638 aa10.35□□□□□ -0.75
CSMD2-205ENST00000373381 NBPF5PQ86XG9 351 aaPredicted RBP10.35□□□□□ -0.75
CSMD2-205ENST00000373381 NBPF4Q96M43 638 aa10.35□□□□□ -0.75
CSMD2-205ENST00000373381 ANKFY1Q9P2R3 1169 aa10.35□□□□□ -0.75
CSMD2-205ENST00000373381 SPC25Q9HBM1 224 aa10.35□□□□□ -0.75
CSMD2-205ENST00000373381 M0QZ92 97 aa10.35□□□□□ -0.75
CSMD2-205ENST00000373381 IFIT3O14879 490 aaKnown RBP10.35□□□□□ -0.75
CSMD2-205ENST00000373381 RASA3Q14644 834 aa10.35□□□□□ -0.75
CSMD2-205ENST00000373381 CNNM3Q8NE01 707 aa10.35□□□□□ -0.75
CSMD2-205ENST00000373381 ARHGAP5Q13017 1502 aa10.35□□□□□ -0.75
CSMD2-205ENST00000373381 RNF34Q969K3 372 aa10.35□□□□□ -0.75
CSMD2-205ENST00000373381 ZNF428Q96B54 188 aa10.35□□□□□ -0.75
CSMD2-205ENST00000373381 TRIM6Q9C030 488 aaPredicted RBP10.35□□□□□ -0.75
CSMD2-205ENST00000373381 SCAND2PQ9GZW5 306 aaPredicted RBP10.35□□□□□ -0.75
CSMD2-205ENST00000373381 ZNF213O14771 459 aa10.35□□□□□ -0.75
CSMD2-205ENST00000373381 CCDC50Q8IVM0 306 aa10.35□□□□□ -0.75
CSMD2-205ENST00000373381 PTPN14Q15678 1187 aa10.34□□□□□ -0.75
CSMD2-205ENST00000373381 SULT6B1Q6IMI4 303 aa10.34□□□□□ -0.75
CSMD2-205ENST00000373381 FMNL3Q8IVF7 1028 aa10.34□□□□□ -0.75
CSMD2-205ENST00000373381 E7EVH7 732 aa10.34□□□□□ -0.75
CSMD2-205ENST00000373381 PLCB3Q01970 1234 aa10.34□□□□□ -0.75
CSMD2-205ENST00000373381 WDR46O15213 610 aaKnown RBP10.34□□□□□ -0.75
CSMD2-205ENST00000373381 SH2B1Q9NRF2 756 aaPredicted RBP10.34□□□□□ -0.75
CSMD2-205ENST00000373381 PTCD1O75127 700 aaKnown RBP10.34□□□□□ -0.75
CSMD2-205ENST00000373381 MMRN2Q9H8L6 949 aa10.34□□□□□ -0.75
CSMD2-205ENST00000373381 LMBR1Q8WVP7 490 aa10.34□□□□□ -0.75
CSMD2-205ENST00000373381 ARID5AQ03989 594 aa10.34□□□□□ -0.75
CSMD2-205ENST00000373381 GNAT3A8MTJ3 354 aa10.34□□□□□ -0.75
CSMD2-205ENST00000373381 RAB11FIP3O75154 756 aa10.34□□□□□ -0.75
CSMD2-205ENST00000373381 TSPY3P0CV98 308 aa10.34□□□□□ -0.75
CSMD2-205ENST00000373381 TSPY8P0CW00 308 aa10.34□□□□□ -0.75
CSMD2-205ENST00000373381 TNPO1Q92973 898 aaKnown RBP10.34□□□□□ -0.75
CSMD2-205ENST00000373381 MFSD6Q6ZSS7 791 aa10.33□□□□□ -0.76
CSMD2-205ENST00000373381 SPAG5Q96R06 1193 aa10.33□□□□□ -0.76
CSMD2-205ENST00000373381 TMOD4Q9NZQ9 345 aa10.33□□□□□ -0.76
CSMD2-205ENST00000373381 JADE2Q9NQC1 790 aa10.33□□□□□ -0.76
CSMD2-205ENST00000373381 IVNS1ABPQ9Y6Y0 642 aa10.33□□□□□ -0.76
CSMD2-205ENST00000373381 SMARCC2Q8TAQ2 1214 aa10.33□□□□□ -0.76
CSMD2-205ENST00000373381 TEX13AQ9BXU3 409 aaPredicted RBP10.33□□□□□ -0.76
CSMD2-205ENST00000373381 CEP128Q6ZU80 1094 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms