RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 ADGRB2O60241 1585 aa15.78■□□□□ 0.12
NCDN-203ENST00000373253 IFIT1P09914 478 aaKnown RBP15.78■□□□□ 0.12
NCDN-203ENST00000373253 CWC25Q9NXE8 425 aaPredicted RBP15.78■□□□□ 0.12
NCDN-203ENST00000373253 TRMT112Q9UI30 125 aaKnown RBP15.78■□□□□ 0.12
NCDN-203ENST00000373253 CCDC24Q8N4L8 307 aa15.77■□□□□ 0.12
NCDN-203ENST00000373253 CWC22Q9HCG8 908 aaKnown RBP15.77■□□□□ 0.12
NCDN-203ENST00000373253 KDRP35968 1356 aa15.77■□□□□ 0.12
NCDN-203ENST00000373253 RRP12Q5JTH9 1297 aaKnown RBP15.77■□□□□ 0.11
NCDN-203ENST00000373253 EVI5LQ96CN4 794 aa15.77■□□□□ 0.11
NCDN-203ENST00000373253 METTL24Q5JXM2 366 aa15.76■□□□□ 0.11
NCDN-203ENST00000373253 DRC7Q8IY82 874 aa15.76■□□□□ 0.11
NCDN-203ENST00000373253 BICD2Q8TD16 824 aa15.76■□□□□ 0.11
NCDN-203ENST00000373253 METTL22Q9BUU2 404 aaPredicted RBP15.76■□□□□ 0.11
NCDN-203ENST00000373253 CNPY2Q9Y2B0 182 aa15.76■□□□□ 0.11
NCDN-203ENST00000373253 SNX14Q9Y5W7 946 aa15.76■□□□□ 0.11
NCDN-203ENST00000373253 SGSM2O43147 1006 aa15.76■□□□□ 0.11
NCDN-203ENST00000373253 GJB2P29033 226 aa15.76■□□□□ 0.11
NCDN-203ENST00000373253 GNL2Q13823 731 aaKnown RBP15.76■□□□□ 0.11
NCDN-203ENST00000373253 A0A0D9SFI3 127 aa15.76■□□□□ 0.11
NCDN-203ENST00000373253 MTMR7Q9Y216 660 aa15.76■□□□□ 0.11
NCDN-203ENST00000373253 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.76■□□□□ 0.11
NCDN-203ENST00000373253 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.76■□□□□ 0.11
NCDN-203ENST00000373253 SASH1O94885 1247 aa15.75■□□□□ 0.11
NCDN-203ENST00000373253 BRINP3Q76B58 766 aa15.75■□□□□ 0.11
NCDN-203ENST00000373253 LIMCH1Q9UPQ0 1083 aa15.75■□□□□ 0.11
NCDN-203ENST00000373253 LDHAL6AQ6ZMR3 332 aa15.75■□□□□ 0.11
NCDN-203ENST00000373253 HSP90AA2PQ14568 343 aaPredicted RBP15.75■□□□□ 0.11
NCDN-203ENST00000373253 LRRC24Q50LG9 513 aa15.75■□□□□ 0.11
NCDN-203ENST00000373253 FAM182BQ5T319 152 aa15.75■□□□□ 0.11
NCDN-203ENST00000373253 CCDC82Q8N4S0 544 aa15.75■□□□□ 0.11
NCDN-203ENST00000373253 PUS3Q9BZE2 481 aaKnown RBP15.75■□□□□ 0.11
NCDN-203ENST00000373253 EXOC5O00471 708 aa15.74■□□□□ 0.11
NCDN-203ENST00000373253 MCM2P49736 904 aa15.74■□□□□ 0.11
NCDN-203ENST00000373253 ZMYND15Q9H091 742 aa15.74■□□□□ 0.11
NCDN-203ENST00000373253 ADCY9O60503 1353 aa15.74■□□□□ 0.11
NCDN-203ENST00000373253 SLC4A8Q2Y0W8 1093 aa15.74■□□□□ 0.11
NCDN-203ENST00000373253 STARD3NLO95772 234 aa15.73■□□□□ 0.11
NCDN-203ENST00000373253 ATP2B1P20020 1258 aa15.73■□□□□ 0.11
NCDN-203ENST00000373253 CCDC158Q5M9N0 1113 aa15.73■□□□□ 0.11
NCDN-203ENST00000373253 SYAP1Q96A49 352 aaPredicted RBP15.73■□□□□ 0.11
NCDN-203ENST00000373253 USP32Q8NFA0 1604 aa15.73■□□□□ 0.11
NCDN-203ENST00000373253 PRIM1P49642 420 aaKnown RBP15.73■□□□□ 0.11
NCDN-203ENST00000373253 ADGRL3Q9HAR2 1447 aa15.73■□□□□ 0.11
NCDN-203ENST00000373253 AK9Q5TCS8 1911 aa15.73■□□□□ 0.11
NCDN-203ENST00000373253 IFIT5Q13325 482 aaKnown RBP15.73■□□□□ 0.11
NCDN-203ENST00000373253 PI4K2BQ8TCG2 481 aa15.73■□□□□ 0.11
NCDN-203ENST00000373253 BRF1Q92994 677 aa15.73■□□□□ 0.11
NCDN-203ENST00000373253 SNAP23O00161 211 aa15.72■□□□□ 0.11
NCDN-203ENST00000373253 GADD45BO75293 160 aaPredicted RBP15.72■□□□□ 0.11
NCDN-203ENST00000373253 ZRSR1Q15695 479 aaKnown RBP15.72■□□□□ 0.11
NCDN-203ENST00000373253 SMIM5Q71RC9 77 aa15.72■□□□□ 0.11
NCDN-203ENST00000373253 WDR33Q9C0J8 1336 aaKnown RBP15.72■□□□□ 0.11
NCDN-203ENST00000373253 PSMA5P28066 241 aa15.72■□□□□ 0.11
NCDN-203ENST00000373253 CREB3L3Q68CJ9 461 aa15.72■□□□□ 0.11
NCDN-203ENST00000373253 CCDC144CPQ8IYA2 1237 aa15.72■□□□□ 0.11
NCDN-203ENST00000373253 NSFL1CQ9UNZ2 370 aaKnown RBP15.72■□□□□ 0.11
NCDN-203ENST00000373253 CPLX1O14810 134 aa15.72■□□□□ 0.11
NCDN-203ENST00000373253 HCLS1P14317 486 aaPredicted RBP15.72■□□□□ 0.11
NCDN-203ENST00000373253 PTMSP20962 102 aa15.72■□□□□ 0.11
NCDN-203ENST00000373253 DNM1Q05193 864 aaKnown RBP15.72■□□□□ 0.11
NCDN-203ENST00000373253 ZSCAN23Q3MJ62 389 aa15.72■□□□□ 0.11
NCDN-203ENST00000373253 ITSN1Q15811 1721 aa15.71■□□□□ 0.11
NCDN-203ENST00000373253 PI16Q6UXB8 463 aa15.71■□□□□ 0.11
NCDN-203ENST00000373253 ABCF2Q9UG63 623 aa15.71■□□□□ 0.11
NCDN-203ENST00000373253 RGS12O14924 1447 aa15.71■□□□□ 0.11
NCDN-203ENST00000373253 RGPD8O14715 1765 aaPredicted RBP15.71■□□□□ 0.11
NCDN-203ENST00000373253 STX6O43752 255 aa15.71■□□□□ 0.11
NCDN-203ENST00000373253 SF3A1Q15459 793 aaKnown RBP15.71■□□□□ 0.11
NCDN-203ENST00000373253 ZNF589Q86UQ0 364 aaPredicted RBP15.71■□□□□ 0.11
NCDN-203ENST00000373253 FAM43AQ8N2R8 423 aa15.71■□□□□ 0.11
NCDN-203ENST00000373253 DBNLQ9UJU6 430 aaKnown RBP15.71■□□□□ 0.11
NCDN-203ENST00000373253 LARGE1O95461 756 aa15.71■□□□□ 0.1
NCDN-203ENST00000373253 HOXB7P09629 217 aa15.71■□□□□ 0.1
NCDN-203ENST00000373253 TNNI3KQ59H18 835 aa15.71■□□□□ 0.1
NCDN-203ENST00000373253 USP48Q86UV5 1035 aa15.71■□□□□ 0.1
NCDN-203ENST00000373253 MPHOSPH8Q99549 860 aa15.71■□□□□ 0.1
NCDN-203ENST00000373253 FPGT-TNNI3KV9GXZ4 949 aa15.71■□□□□ 0.1
NCDN-203ENST00000373253 VPS37DQ86XT2 251 aa15.7■□□□□ 0.1
NCDN-203ENST00000373253 RALYLQ86SE5 291 aaKnown RBP15.7■□□□□ 0.1
NCDN-203ENST00000373253 CKAP2LQ8IYA6 745 aa15.7■□□□□ 0.1
NCDN-203ENST00000373253 SPC24Q8NBT2 197 aa15.7■□□□□ 0.1
NCDN-203ENST00000373253 BABAM1Q9NWV8 329 aa15.7■□□□□ 0.1
NCDN-203ENST00000373253 JAG2Q9Y219 1238 aa15.7■□□□□ 0.1
NCDN-203ENST00000373253 ANKARQ7Z5J8 1434 aa15.69■□□□□ 0.1
NCDN-203ENST00000373253 NRXN3Q9Y4C0 1643 aa15.69■□□□□ 0.1
NCDN-203ENST00000373253 SYT1P21579 422 aa15.69■□□□□ 0.1
NCDN-203ENST00000373253 NFXL1Q6ZNB6 911 aa15.69■□□□□ 0.1
NCDN-203ENST00000373253 KIF24Q5T7B8 1368 aa15.69■□□□□ 0.1
NCDN-203ENST00000373253 ATP6V1DQ9Y5K8 247 aa15.69■□□□□ 0.1
NCDN-203ENST00000373253 CCDC171Q6TFL3 1326 aa15.69■□□□□ 0.1
NCDN-203ENST00000373253 UBR1Q8IWV7 1749 aa15.69■□□□□ 0.1
NCDN-203ENST00000373253 A0A1B0GUL7 405 aa15.69■□□□□ 0.1
NCDN-203ENST00000373253 RXRAP19793 462 aa15.69■□□□□ 0.1
NCDN-203ENST00000373253 GIMAP6Q6P9H5 292 aa15.69■□□□□ 0.1
NCDN-203ENST00000373253 OSBPL3Q9H4L5 887 aa15.69■□□□□ 0.1
NCDN-203ENST00000373253 PXDNQ92626 1479 aa15.68■□□□□ 0.1
NCDN-203ENST00000373253 HSPA4P34932 840 aa15.68■□□□□ 0.1
NCDN-203ENST00000373253 KLHL40Q2TBA0 621 aa15.68■□□□□ 0.1
NCDN-203ENST00000373253 PIBF1Q8WXW3 757 aa15.68■□□□□ 0.1
NCDN-203ENST00000373253 RAD50Q92878 1312 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms