RNA–Protein interactions for RNA: ENST00000373057.7

FOXP4-202, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-202ENST00000373057 RIMS1Q86UR5 1692 aaKnown RBP22.25■■□□□ 1.15
FOXP4-202ENST00000373057 USP6P35125 1406 aa22.25■■□□□ 1.15
FOXP4-202ENST00000373057 PRIMPOLQ96LW4 560 aa22.25■■□□□ 1.15
FOXP4-202ENST00000373057 PLEKHG3A1L390 1219 aa22.25■■□□□ 1.15
FOXP4-202ENST00000373057 TPD52L1Q16890 204 aaPredicted RBP22.25■■□□□ 1.15
FOXP4-202ENST00000373057 FTOQ9C0B1 505 aaKnown RBP eCLIP22.25■■□□□ 1.151e-9■□□□□ 9.1
FOXP4-202ENST00000373057 EID1Q9Y6B2 187 aa22.25■■□□□ 1.15
FOXP4-202ENST00000373057 CLTCQ00610 1675 aaKnown RBP22.24■■□□□ 1.15
FOXP4-202ENST00000373057 IGSF1Q8N6C5 1336 aa22.24■■□□□ 1.15
FOXP4-202ENST00000373057 MAP3K5Q99683 1374 aa22.24■■□□□ 1.15
FOXP4-202ENST00000373057 NBPF6Q5VWK0 638 aa22.24■■□□□ 1.15
FOXP4-202ENST00000373057 EAF2Q96CJ1 260 aaPredicted RBP22.24■■□□□ 1.15
FOXP4-202ENST00000373057 NBPF4Q96M43 638 aa22.24■■□□□ 1.15
FOXP4-202ENST00000373057 HSP90AB4PQ58FF6 505 aa22.24■■□□□ 1.15
FOXP4-202ENST00000373057 CBX8Q9HC52 389 aa22.24■■□□□ 1.15
FOXP4-202ENST00000373057 CCDC171Q6TFL3 1326 aa22.24■■□□□ 1.15
FOXP4-202ENST00000373057 NR1I2O75469 434 aa22.23■■□□□ 1.15
FOXP4-202ENST00000373057 ARID5BQ14865 1188 aa22.23■■□□□ 1.15
FOXP4-202ENST00000373057 SLFNL1Q499Z3 407 aa22.23■■□□□ 1.15
FOXP4-202ENST00000373057 KIAA1524Q8TCG1 905 aa22.23■■□□□ 1.15
FOXP4-202ENST00000373057 SLC39A6Q13433 755 aa22.23■■□□□ 1.15
FOXP4-202ENST00000373057 FAM200AQ8TCP9 573 aa22.23■■□□□ 1.15
FOXP4-202ENST00000373057 FMNL2Q96PY5 1086 aa22.23■■□□□ 1.15
FOXP4-202ENST00000373057 CEP170BQ9Y4F5 1589 aaPredicted RBP22.23■■□□□ 1.15
FOXP4-202ENST00000373057 ZNF165P49910 485 aa22.23■■□□□ 1.15
FOXP4-202ENST00000373057 SBNO1A3KN83 1393 aa22.22■■□□□ 1.15
FOXP4-202ENST00000373057 VPS53Q5VIR6 699 aa22.22■■□□□ 1.15
FOXP4-202ENST00000373057 ZNF589Q86UQ0 364 aaPredicted RBP22.22■■□□□ 1.15
FOXP4-202ENST00000373057 PRDM4Q9UKN5 801 aa22.22■■□□□ 1.15
FOXP4-202ENST00000373057 SLC27A2O14975 620 aa22.22■■□□□ 1.15
FOXP4-202ENST00000373057 EIF4A1P60842 406 aaKnown RBP22.22■■□□□ 1.15
FOXP4-202ENST00000373057 RIC3Q7Z5B4 369 aa22.22■■□□□ 1.15
FOXP4-202ENST00000373057 SEC62Q99442 399 aaKnown RBP22.22■■□□□ 1.15
FOXP4-202ENST00000373057 MRVI1Q9Y6F6 885 aa22.22■■□□□ 1.15
FOXP4-202ENST00000373057 TNNT1P13805 278 aa22.21■■□□□ 1.15
FOXP4-202ENST00000373057 CHST3Q7LGC8 479 aa22.21■■□□□ 1.15
FOXP4-202ENST00000373057 BICC1Q9H694 974 aaKnown RBP22.21■■□□□ 1.15
FOXP4-202ENST00000373057 ARHGEF10O15013 1369 aa22.21■■□□□ 1.15
FOXP4-202ENST00000373057 DLC1Q96QB1 1528 aa22.21■■□□□ 1.15
FOXP4-202ENST00000373057 REREQ9P2R6 1566 aa22.21■■□□□ 1.15
FOXP4-202ENST00000373057 CCT2P78371 535 aaKnown RBP22.21■■□□□ 1.15
FOXP4-202ENST00000373057 POLA2Q14181 598 aa22.21■■□□□ 1.15
FOXP4-202ENST00000373057 GOLGA6L19H0YKK7 550 aa22.21■■□□□ 1.15
FOXP4-202ENST00000373057 RAB11FIP4Q86YS3 637 aa22.21■■□□□ 1.15
FOXP4-202ENST00000373057 CLIP2Q9UDT6 1046 aa22.2■■□□□ 1.14
FOXP4-202ENST00000373057 SSH2Q76I76 1423 aa22.2■■□□□ 1.14
FOXP4-202ENST00000373057 SUCLG2Q96I99 432 aa22.2■■□□□ 1.14
FOXP4-202ENST00000373057 ZSCAN31Q96LW9 406 aaPredicted RBP22.2■■□□□ 1.14
FOXP4-202ENST00000373057 SH2B1Q9NRF2 756 aaPredicted RBP22.2■■□□□ 1.14
FOXP4-202ENST00000373057 RICTORQ6R327 1708 aa22.2■■□□□ 1.14
FOXP4-202ENST00000373057 ZSWIM6Q9HCJ5 1215 aa22.19■■□□□ 1.14
FOXP4-202ENST00000373057 BECN2A8MW95 431 aa22.19■■□□□ 1.14
FOXP4-202ENST00000373057 C1orf141Q5JVX7 400 aa22.19■■□□□ 1.14
FOXP4-202ENST00000373057 TMEM87AQ8NBN3 555 aa22.19■■□□□ 1.14
FOXP4-202ENST00000373057 BRF1Q92994 677 aa22.19■■□□□ 1.14
FOXP4-202ENST00000373057 EVI5LQ96CN4 794 aa22.19■■□□□ 1.14
FOXP4-202ENST00000373057 OVOS2A0A0J9YW53 1432 aa22.18■■□□□ 1.14
FOXP4-202ENST00000373057 OVOS2Q6IE36 1432 aa22.18■■□□□ 1.14
FOXP4-202ENST00000373057 DDX46Q7L014 1031 aaKnown RBP22.18■■□□□ 1.14
FOXP4-202ENST00000373057 RNF20Q5VTR2 975 aa22.17■■□□□ 1.14
FOXP4-202ENST00000373057 FUCA2Q9BTY2 467 aa22.17■■□□□ 1.14
FOXP4-202ENST00000373057 PSMA5P28066 241 aa22.17■■□□□ 1.14
FOXP4-202ENST00000373057 NECTIN1Q15223 517 aa22.16■■□□□ 1.14
FOXP4-202ENST00000373057 LEO1Q8WVC0 666 aaPredicted RBP22.16■■□□□ 1.14
FOXP4-202ENST00000373057 NEUROD6Q96NK8 337 aa22.16■■□□□ 1.14
FOXP4-202ENST00000373057 USP16Q9Y5T5 823 aa22.16■■□□□ 1.14
FOXP4-202ENST00000373057 SASH1O94885 1247 aa22.16■■□□□ 1.14
FOXP4-202ENST00000373057 ZNF771Q7L3S4 317 aaPredicted RBP22.16■■□□□ 1.14
FOXP4-202ENST00000373057 SMAP1Q8IYB5 467 aaPredicted RBP22.16■■□□□ 1.14
FOXP4-202ENST00000373057 ZBTB9Q96C00 473 aa22.16■■□□□ 1.14
FOXP4-202ENST00000373057 PPP6R1Q9UPN7 881 aa22.16■■□□□ 1.14
FOXP4-202ENST00000373057 ATP5J2-PTCD1G3V325 749 aa22.15■■□□□ 1.14
FOXP4-202ENST00000373057 PTCD1O75127 700 aaKnown RBP22.15■■□□□ 1.14
FOXP4-202ENST00000373057 PSME1Q06323 249 aa22.15■■□□□ 1.14
FOXP4-202ENST00000373057 ESCO1Q5FWF5 840 aa22.15■■□□□ 1.14
FOXP4-202ENST00000373057 ISM2Q6H9L7 571 aa22.15■■□□□ 1.14
FOXP4-202ENST00000373057 DBF4Q9UBU7 674 aaPredicted RBP22.15■■□□□ 1.14
FOXP4-202ENST00000373057 AOX1Q06278 1338 aa22.15■■□□□ 1.14
FOXP4-202ENST00000373057 TNRQ92752 1358 aa22.15■■□□□ 1.14
FOXP4-202ENST00000373057 KCNA6P17658 529 aa22.14■■□□□ 1.13
FOXP4-202ENST00000373057 PDCP20941 246 aa22.14■■□□□ 1.13
FOXP4-202ENST00000373057 NCOA5Q9HCD5 579 aaKnown RBP22.14■■□□□ 1.13
FOXP4-202ENST00000373057 Q6ZUG5 572 aa22.14■■□□□ 1.13
FOXP4-202ENST00000373057 CCDC144BQ3MJ40 725 aa22.13■■□□□ 1.13
FOXP4-202ENST00000373057 CCDC144CPQ8IYA2 1237 aa22.13■■□□□ 1.13
FOXP4-202ENST00000373057 CCDC112Q8NEF3 446 aa22.13■■□□□ 1.13
FOXP4-202ENST00000373057 CACTINQ8WUQ7 758 aaKnown RBP22.13■■□□□ 1.13
FOXP4-202ENST00000373057 TTC41PQ6P2S7 1318 aa22.13■■□□□ 1.13
FOXP4-202ENST00000373057 MYD88Q99836 296 aa22.13■■□□□ 1.13
FOXP4-202ENST00000373057 TMEM2Q9UHN6 1383 aa22.13■■□□□ 1.13
FOXP4-202ENST00000373057 ZNF330Q9Y3S2 320 aaPredicted RBP22.13■■□□□ 1.13
FOXP4-202ENST00000373057 BIN1O00499 593 aa22.12■■□□□ 1.13
FOXP4-202ENST00000373057 PGBD1Q96JS3 809 aa22.12■■□□□ 1.13
FOXP4-202ENST00000373057 TTC21AQ8NDW8 1320 aa22.12■■□□□ 1.13
FOXP4-202ENST00000373057 GRM8O00222 908 aa22.12■■□□□ 1.13
FOXP4-202ENST00000373057 ZSCAN20P17040 1043 aaPredicted RBP22.12■■□□□ 1.13
FOXP4-202ENST00000373057 ME1P48163 572 aa22.12■■□□□ 1.13
FOXP4-202ENST00000373057 SCAND2PQ9GZW5 306 aaPredicted RBP22.12■■□□□ 1.13
FOXP4-202ENST00000373057 SPTLC3Q9NUV7 552 aa22.12■■□□□ 1.13
FOXP4-202ENST00000373057 OTUD7BQ6GQQ9 843 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms