RNA–Protein interactions for RNA: ENST00000372837.3

CHCHD1-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 1, humanhuman

TSL 2 BASIC

Gene CHCHD1, Length 1,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1-202ENST00000372837 IL16Q14005 1332 aa16.04■□□□□ 0.16
CHCHD1-202ENST00000372837 AOC2O75106 756 aa16.04■□□□□ 0.16
CHCHD1-202ENST00000372837 RGS3P49796 1198 aa16.04■□□□□ 0.16
CHCHD1-202ENST00000372837 SKOR2Q2VWA4 1001 aaPredicted RBP16.04■□□□□ 0.16
CHCHD1-202ENST00000372837 ZNF622Q969S3 477 aaKnown RBP eCLIP16.04■□□□□ 0.16
CHCHD1-202ENST00000372837 MCM4P33991 863 aa16.03■□□□□ 0.16
CHCHD1-202ENST00000372837 SLC4A3P48751 1232 aa16.03■□□□□ 0.16
CHCHD1-202ENST00000372837 FMR1Q06787 632 aaKnown RBP eCLIP16.03■□□□□ 0.16
CHCHD1-202ENST00000372837 EYA1Q99502 592 aa16.03■□□□□ 0.16
CHCHD1-202ENST00000372837 BCL2L12Q9HB09 334 aa16.03■□□□□ 0.16
CHCHD1-202ENST00000372837 SPINK5Q9NQ38 1064 aaPredicted RBP16.03■□□□□ 0.16
CHCHD1-202ENST00000372837 EMILIN1Q9Y6C2 1016 aa16.03■□□□□ 0.16
CHCHD1-202ENST00000372837 BCAR3O75815 825 aa16.02■□□□□ 0.16
CHCHD1-202ENST00000372837 IGHDP01880 384 aa16.02■□□□□ 0.16
CHCHD1-202ENST00000372837 MAP2K2P36507 400 aa16.02■□□□□ 0.16
CHCHD1-202ENST00000372837 RARSP54136 660 aaKnown RBP16.02■□□□□ 0.16
CHCHD1-202ENST00000372837 SNX21Q969T3 373 aa16.02■□□□□ 0.16
CHCHD1-202ENST00000372837 KIF16BQ96L93 1317 aa16.01■□□□□ 0.15
CHCHD1-202ENST00000372837 ZNF541Q9H0D2 1346 aa16.01■□□□□ 0.15
CHCHD1-202ENST00000372837 CA12O43570 354 aa16.01■□□□□ 0.15
CHCHD1-202ENST00000372837 PNMA8AQ86V59 439 aaPredicted RBP16.01■□□□□ 0.15
CHCHD1-202ENST00000372837 NARFQ9UHQ1 456 aa16.01■□□□□ 0.15
CHCHD1-202ENST00000372837 SOS1Q07889 1333 aaPredicted RBP16■□□□□ 0.15
CHCHD1-202ENST00000372837 TERF1P54274 439 aa16■□□□□ 0.15
CHCHD1-202ENST00000372837 HDAC1Q13547 482 aaPredicted RBP16■□□□□ 0.15
CHCHD1-202ENST00000372837 CHMP4BQ9H444 224 aaKnown RBP16■□□□□ 0.15
CHCHD1-202ENST00000372837 KIF20BQ96Q89 1820 aa16■□□□□ 0.15
CHCHD1-202ENST00000372837 TJP1Q07157 1748 aa15.99■□□□□ 0.15
CHCHD1-202ENST00000372837 COL3A1P02461 1466 aaPredicted RBP15.99■□□□□ 0.15
CHCHD1-202ENST00000372837 U2AF1L5P0DN76 240 aaPredicted RBP15.99■□□□□ 0.15
CHCHD1-202ENST00000372837 CABP4P57796 275 aa15.99■□□□□ 0.15
CHCHD1-202ENST00000372837 U2AF1Q01081 240 aaKnown RBP eCLIP15.99■□□□□ 0.15
CHCHD1-202ENST00000372837 CST9Q5W186 159 aa15.99■□□□□ 0.15
CHCHD1-202ENST00000372837 TBC1D2Q9BYX2 928 aa15.98■□□□□ 0.15
CHCHD1-202ENST00000372837 TLL2Q9Y6L7 1015 aa15.98■□□□□ 0.15
CHCHD1-202ENST00000372837 TPM2P07951 284 aa15.96■□□□□ 0.15
CHCHD1-202ENST00000372837 TNNT2P45379 298 aaPredicted RBP15.96■□□□□ 0.15
CHCHD1-202ENST00000372837 ZKSCAN2Q63HK3 967 aa15.96■□□□□ 0.15
CHCHD1-202ENST00000372837 PPP4R3CPQ6ZMV5 832 aa15.96■□□□□ 0.15
CHCHD1-202ENST00000372837 BICDL1Q6ZP65 573 aa15.96■□□□□ 0.15
CHCHD1-202ENST00000372837 DNAJC10Q8IXB1 793 aa15.96■□□□□ 0.15
CHCHD1-202ENST00000372837 CCDC24Q8N4L8 307 aa15.96■□□□□ 0.15
CHCHD1-202ENST00000372837 ZNF428Q96B54 188 aa15.96■□□□□ 0.15
CHCHD1-202ENST00000372837 BRIP1Q9BX63 1249 aa15.96■□□□□ 0.15
CHCHD1-202ENST00000372837 PDZRN3Q9UPQ7 1066 aa15.96■□□□□ 0.15
CHCHD1-202ENST00000372837 ANKRD31Q8N7Z5 1873 aa15.96■□□□□ 0.15
CHCHD1-202ENST00000372837 IBTKQ9P2D0 1353 aaPredicted RBP15.96■□□□□ 0.15
CHCHD1-202ENST00000372837 COL11A2P13942 1736 aaPredicted RBP15.96■□□□□ 0.15
CHCHD1-202ENST00000372837 HSP90AB1P08238 724 aaKnown RBP15.95■□□□□ 0.14
CHCHD1-202ENST00000372837 XRCC6P12956 609 aaKnown RBP eCLIP15.95■□□□□ 0.14
CHCHD1-202ENST00000372837 PDE6BP35913 854 aa15.95■□□□□ 0.14
CHCHD1-202ENST00000372837 BRPF1P55201 1214 aaPredicted RBP15.95■□□□□ 0.14
CHCHD1-202ENST00000372837 PRPF40BQ6NWY9 871 aaKnown RBP15.95■□□□□ 0.14
CHCHD1-202ENST00000372837 CLEC17AQ6ZS10 378 aa15.95■□□□□ 0.14
CHCHD1-202ENST00000372837 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.95■□□□□ 0.14
CHCHD1-202ENST00000372837 COL15A1P39059 1388 aa15.95■□□□□ 0.14
CHCHD1-202ENST00000372837 SLX4Q8IY92 1834 aa15.94■□□□□ 0.14
CHCHD1-202ENST00000372837 TRAF5O00463 557 aa15.94■□□□□ 0.14
CHCHD1-202ENST00000372837 RBM25P49756 843 aaKnown RBP15.94■□□□□ 0.14
CHCHD1-202ENST00000372837 CALD1Q05682 793 aaKnown RBP15.94■□□□□ 0.14
CHCHD1-202ENST00000372837 NFATC2IPQ8NCF5 419 aa15.94■□□□□ 0.14
CHCHD1-202ENST00000372837 TRAK2O60296 914 aa15.93■□□□□ 0.14
CHCHD1-202ENST00000372837 SOGA3Q5TF21 947 aa15.93■□□□□ 0.14
CHCHD1-202ENST00000372837 CIAPIN1Q6FI81 312 aa15.93■□□□□ 0.14
CHCHD1-202ENST00000372837 PRR5LQ6MZQ0 368 aa15.93■□□□□ 0.14
CHCHD1-202ENST00000372837 SMC5Q8IY18 1101 aa15.93■□□□□ 0.14
CHCHD1-202ENST00000372837 CNKSR1Q969H4 720 aa15.93■□□□□ 0.14
CHCHD1-202ENST00000372837 GCC1Q96CN9 775 aa15.93■□□□□ 0.14
CHCHD1-202ENST00000372837 RRAGDQ9NQL2 400 aaPredicted RBP15.93■□□□□ 0.14
CHCHD1-202ENST00000372837 COG6Q9Y2V7 657 aa15.93■□□□□ 0.14
CHCHD1-202ENST00000372837 DIAPH1O60610 1272 aaKnown RBP15.92■□□□□ 0.14
CHCHD1-202ENST00000372837 HSP90AA1P07900 732 aaKnown RBP15.92■□□□□ 0.14
CHCHD1-202ENST00000372837 CYP19A1P11511 503 aaPredicted RBP15.92■□□□□ 0.14
CHCHD1-202ENST00000372837 DDIT3P35638 169 aa15.92■□□□□ 0.14
CHCHD1-202ENST00000372837 TMPOP42166 694 aaKnown RBP15.92■□□□□ 0.14
CHCHD1-202ENST00000372837 MVPQ14764 893 aaKnown RBP15.92■□□□□ 0.14
CHCHD1-202ENST00000372837 NEUROD2Q15784 382 aa15.92■□□□□ 0.14
CHCHD1-202ENST00000372837 HS1BP3Q53T59 392 aa15.92■□□□□ 0.14
CHCHD1-202ENST00000372837 HABP4Q5JVS0 413 aaKnown RBP15.92■□□□□ 0.14
CHCHD1-202ENST00000372837 C7orf43Q8WVR3 580 aa15.92■□□□□ 0.14
CHCHD1-202ENST00000372837 GBP4Q96PP9 640 aa15.92■□□□□ 0.14
CHCHD1-202ENST00000372837 PLEKHF1Q96S99 279 aa15.92■□□□□ 0.14
CHCHD1-202ENST00000372837 C22orf23Q9BZE7 217 aa15.92■□□□□ 0.14
CHCHD1-202ENST00000372837 ZNF277Q9NRM2 450 aaPredicted RBP15.92■□□□□ 0.14
CHCHD1-202ENST00000372837 DDX19BQ9UMR2 479 aa15.92■□□□□ 0.14
CHCHD1-202ENST00000372837 ZBTB1Q9Y2K1 713 aa15.92■□□□□ 0.14
CHCHD1-202ENST00000372837 IPO8O15397 1037 aaKnown RBP15.91■□□□□ 0.14
CHCHD1-202ENST00000372837 SAPCD2Q86UD0 394 aa15.91■□□□□ 0.14
CHCHD1-202ENST00000372837 SKAP1Q86WV1 359 aa15.91■□□□□ 0.14
CHCHD1-202ENST00000372837 HSCBQ8IWL3 235 aa15.91■□□□□ 0.14
CHCHD1-202ENST00000372837 FTSJ3Q8IY81 847 aaKnown RBP15.91■□□□□ 0.14
CHCHD1-202ENST00000372837 PANK1Q8TE04 598 aa15.91■□□□□ 0.14
CHCHD1-202ENST00000372837 RRP7AQ9Y3A4 280 aaKnown RBP15.91■□□□□ 0.14
CHCHD1-202ENST00000372837 FZD9O00144 591 aa15.9■□□□□ 0.14
CHCHD1-202ENST00000372837 TBC1D9BQ66K14 1250 aa15.9■□□□□ 0.14
CHCHD1-202ENST00000372837 STYK1Q6J9G0 422 aa15.9■□□□□ 0.14
CHCHD1-202ENST00000372837 DZIP1LQ8IYY4 767 aaKnown RBP15.9■□□□□ 0.14
CHCHD1-202ENST00000372837 GPC2Q8N158 579 aa15.9■□□□□ 0.14
CHCHD1-202ENST00000372837 SRGNP10124 158 aa15.89■□□□□ 0.13
CHCHD1-202ENST00000372837 FKBP4Q02790 459 aaKnown RBP eCLIP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms