RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 FAM227BQ96M60 508 aa15.27■□□□□ 0.04
CTPS1-202ENST00000372621 AXIN2Q9Y2T1 843 aa15.27■□□□□ 0.04
CTPS1-202ENST00000372621 RBM8AQ9Y5S9 174 aaKnown RBP15.27■□□□□ 0.04
CTPS1-202ENST00000372621 HIP1O00291 1037 aa15.27■□□□□ 0.03
CTPS1-202ENST00000372621 R3HCC1Q9Y3T6 440 aaKnown RBP15.27■□□□□ 0.03
CTPS1-202ENST00000372621 NPHP4O75161 1426 aaPredicted RBP15.27■□□□□ 0.03
CTPS1-202ENST00000372621 JCADQ9P266 1359 aa15.27■□□□□ 0.03
CTPS1-202ENST00000372621 IGKV5-2P06315 115 aa15.26■□□□□ 0.03
CTPS1-202ENST00000372621 NMIQ13287 307 aaPredicted RBP15.26■□□□□ 0.03
CTPS1-202ENST00000372621 ORAI2Q96SN7 254 aa15.26■□□□□ 0.03
CTPS1-202ENST00000372621 TLR7Q9NYK1 1049 aaKnown RBP15.26■□□□□ 0.03
CTPS1-202ENST00000372621 MED23Q9ULK4 1368 aa15.26■□□□□ 0.03
CTPS1-202ENST00000372621 FIBPO43427 364 aa15.26■□□□□ 0.03
CTPS1-202ENST00000372621 DDX58O95786 925 aaKnown RBP15.26■□□□□ 0.03
CTPS1-202ENST00000372621 ZKSCAN1P17029 563 aaPredicted RBP15.26■□□□□ 0.03
CTPS1-202ENST00000372621 DNM1Q05193 864 aaKnown RBP15.26■□□□□ 0.03
CTPS1-202ENST00000372621 COL9A3Q14050 684 aaPredicted RBP15.26■□□□□ 0.03
CTPS1-202ENST00000372621 TPCN1Q9ULQ1 816 aa15.26■□□□□ 0.03
CTPS1-202ENST00000372621 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.26■□□□□ 0.03
CTPS1-202ENST00000372621 G3BP1Q13283 466 aaKnown RBP eCLIP15.25■□□□□ 0.03
CTPS1-202ENST00000372621 SLC27A2O14975 620 aa15.25■□□□□ 0.03
CTPS1-202ENST00000372621 CCDC8Q9H0W5 538 aaPredicted RBP15.24■□□□□ 0.03
CTPS1-202ENST00000372621 ALDH8A1Q9H2A2 487 aaPredicted RBP15.24■□□□□ 0.03
CTPS1-202ENST00000372621 A0A0D9SFI3 127 aa15.24■□□□□ 0.03
CTPS1-202ENST00000372621 HCLS1P14317 486 aaPredicted RBP15.24■□□□□ 0.03
CTPS1-202ENST00000372621 MST1RQ04912 1400 aa15.24■□□□□ 0.03
CTPS1-202ENST00000372621 USP25Q9UHP3 1055 aa15.24■□□□□ 0.03
CTPS1-202ENST00000372621 DTNBO60941 627 aa15.23■□□□□ 0.03
CTPS1-202ENST00000372621 NECAB1Q8N987 351 aa15.23■□□□□ 0.03
CTPS1-202ENST00000372621 NEURL1BA8MQ27 555 aa15.23■□□□□ 0.03
CTPS1-202ENST00000372621 AIMP1Q12904 312 aaKnown RBP15.23■□□□□ 0.03
CTPS1-202ENST00000372621 DDX54Q8TDD1 881 aaKnown RBP15.23■□□□□ 0.03
CTPS1-202ENST00000372621 PDIA4P13667 645 aaKnown RBP15.22■□□□□ 0.03
CTPS1-202ENST00000372621 PSMA5P28066 241 aa15.22■□□□□ 0.03
CTPS1-202ENST00000372621 TSGA10IPQ3SY00 556 aa15.22■□□□□ 0.03
CTPS1-202ENST00000372621 ZNF790Q6PG37 636 aa15.22■□□□□ 0.03
CTPS1-202ENST00000372621 KDM6AO15550 1401 aaPredicted RBP15.22■□□□□ 0.03
CTPS1-202ENST00000372621 PTMAP06454 111 aaKnown RBP15.22■□□□□ 0.03
CTPS1-202ENST00000372621 LARP1Q6PKG0 1096 aaKnown RBP15.22■□□□□ 0.03
CTPS1-202ENST00000372621 ERBB3P21860 1342 aa15.22■□□□□ 0.03
CTPS1-202ENST00000372621 ADCY5O95622 1261 aa15.22■□□□□ 0.03
CTPS1-202ENST00000372621 KIAA2012Q0VF49 1180 aa15.22■□□□□ 0.03
CTPS1-202ENST00000372621 PDCL3Q9H2J4 239 aa15.22■□□□□ 0.03
CTPS1-202ENST00000372621 BOLA2Q9H3K6 86 aa15.22■□□□□ 0.03
CTPS1-202ENST00000372621 KDM4AO75164 1064 aa15.21■□□□□ 0.03
CTPS1-202ENST00000372621 GCKRQ14397 625 aa15.21■□□□□ 0.03
CTPS1-202ENST00000372621 EPHA10Q5JZY3 1008 aa15.21■□□□□ 0.03
CTPS1-202ENST00000372621 LRP10Q7Z4F1 713 aa15.21■□□□□ 0.03
CTPS1-202ENST00000372621 TAF6LQ9Y6J9 622 aa15.21■□□□□ 0.03
CTPS1-202ENST00000372621 ALS2Q96Q42 1657 aa15.21■□□□□ 0.03
CTPS1-202ENST00000372621 GIMAP6Q6P9H5 292 aa15.21■□□□□ 0.03
CTPS1-202ENST00000372621 RIC3Q7Z5B4 369 aa15.21■□□□□ 0.03
CTPS1-202ENST00000372621 KLHDC4Q8TBB5 520 aa15.21■□□□□ 0.03
CTPS1-202ENST00000372621 SIL1Q9H173 461 aa15.21■□□□□ 0.03
CTPS1-202ENST00000372621 SLC52A2Q9HAB3 445 aa15.21■□□□□ 0.03
CTPS1-202ENST00000372621 RPS6KB1P23443 525 aa15.21■□□□□ 0.02
CTPS1-202ENST00000372621 TOB2Q14106 344 aaPredicted RBP15.21■□□□□ 0.02
CTPS1-202ENST00000372621 ZNF589Q86UQ0 364 aaPredicted RBP15.21■□□□□ 0.02
CTPS1-202ENST00000372621 FSD1Q9BTV5 496 aa15.21■□□□□ 0.02
CTPS1-202ENST00000372621 ELP1O95163 1332 aa15.2■□□□□ 0.02
CTPS1-202ENST00000372621 VPS37CA5D8V6 355 aaPredicted RBP15.2■□□□□ 0.02
CTPS1-202ENST00000372621 KCNJ4P48050 445 aa15.2■□□□□ 0.02
CTPS1-202ENST00000372621 USPL1Q5W0Q7 1092 aa15.2■□□□□ 0.02
CTPS1-202ENST00000372621 METTL22Q9BUU2 404 aaPredicted RBP15.2■□□□□ 0.02
CTPS1-202ENST00000372621 KIF1AQ12756 1690 aa15.2■□□□□ 0.02
CTPS1-202ENST00000372621 SLC39A6Q13433 755 aa15.2■□□□□ 0.02
CTPS1-202ENST00000372621 ANKRD1Q15327 319 aa15.2■□□□□ 0.02
CTPS1-202ENST00000372621 RNF20Q5VTR2 975 aa15.2■□□□□ 0.02
CTPS1-202ENST00000372621 LARP1BQ659C4 914 aaKnown RBP15.2■□□□□ 0.02
CTPS1-202ENST00000372621 CDC37L1Q7L3B6 337 aa15.2■□□□□ 0.02
CTPS1-202ENST00000372621 AFDNP55196 1824 aaKnown RBP15.2■□□□□ 0.02
CTPS1-202ENST00000372621 UQCRHLA0A096LP55 91 aa15.19■□□□□ 0.02
CTPS1-202ENST00000372621 UQCRHP07919 91 aa15.19■□□□□ 0.02
CTPS1-202ENST00000372621 RFX5P48382 616 aaPredicted RBP15.19■□□□□ 0.02
CTPS1-202ENST00000372621 BLOC1S2Q6QNY1 142 aa15.19■□□□□ 0.02
CTPS1-202ENST00000372621 SASS6Q6UVJ0 657 aa15.19■□□□□ 0.02
CTPS1-202ENST00000372621 TTC6Q86TZ1 520 aa15.19■□□□□ 0.02
CTPS1-202ENST00000372621 COPRSQ9NQ92 184 aa15.19■□□□□ 0.02
CTPS1-202ENST00000372621 HMG20BQ9P0W2 317 aa15.19■□□□□ 0.02
CTPS1-202ENST00000372621 COL15A1P39059 1388 aa15.19■□□□□ 0.02
CTPS1-202ENST00000372621 NPHP3Q7Z494 1330 aa15.19■□□□□ 0.02
CTPS1-202ENST00000372621 TAF5LO75529 589 aa15.19■□□□□ 0.02
CTPS1-202ENST00000372621 XAGE3Q8WTP9 111 aa15.19■□□□□ 0.02
CTPS1-202ENST00000372621 PIBF1Q8WXW3 757 aa15.19■□□□□ 0.02
CTPS1-202ENST00000372621 AP5Z1O43299 807 aa15.19■□□□□ 0.02
CTPS1-202ENST00000372621 NEXNQ0ZGT2 675 aa15.19■□□□□ 0.02
CTPS1-202ENST00000372621 TPRNQ4KMQ1 711 aa15.19■□□□□ 0.02
CTPS1-202ENST00000372621 ABCC6O95255 1503 aa15.18■□□□□ 0.02
CTPS1-202ENST00000372621 ARFGEF2Q9Y6D5 1785 aa15.18■□□□□ 0.02
CTPS1-202ENST00000372621 MYL6BP14649 208 aa15.18■□□□□ 0.02
CTPS1-202ENST00000372621 ATP5JP18859 108 aa15.18■□□□□ 0.02
CTPS1-202ENST00000372621 PDCP20941 246 aa15.18■□□□□ 0.02
CTPS1-202ENST00000372621 COPS6Q7L5N1 327 aa15.18■□□□□ 0.02
CTPS1-202ENST00000372621 KRT28Q7Z3Y7 464 aa15.18■□□□□ 0.02
CTPS1-202ENST00000372621 KRT85P78386 507 aa15.17■□□□□ 0.02
CTPS1-202ENST00000372621 TCEANC2Q96MN5 208 aa15.17■□□□□ 0.02
CTPS1-202ENST00000372621 ZNF830Q96NB3 372 aaPredicted RBP15.17■□□□□ 0.02
CTPS1-202ENST00000372621 MYD88Q99836 296 aa15.17■□□□□ 0.02
CTPS1-202ENST00000372621 DBNLQ9UJU6 430 aaKnown RBP15.17■□□□□ 0.02
CTPS1-202ENST00000372621 COL18A1P39060 1754 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 213.4 ms