RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 NLRP6P59044 892 aa21.6■■□□□ 1.05
MMP9-201ENST00000372330 TRERF1Q96PN7 1200 aa21.6■■□□□ 1.05
MMP9-201ENST00000372330 RSPH14Q9UHP6 348 aa21.6■■□□□ 1.05
MMP9-201ENST00000372330 SETD1BQ9UPS6 1966 aaKnown RBP21.6■■□□□ 1.05
MMP9-201ENST00000372330 ELP1O95163 1332 aa21.6■■□□□ 1.05
MMP9-201ENST00000372330 GPS2Q13227 327 aa21.6■■□□□ 1.05
MMP9-201ENST00000372330 TPRNQ4KMQ1 711 aa21.59■■□□□ 1.05
MMP9-201ENST00000372330 MEIS3Q99687 375 aa21.59■■□□□ 1.05
MMP9-201ENST00000372330 RAD50Q92878 1312 aa21.59■■□□□ 1.05
MMP9-201ENST00000372330 CHD2O14647 1828 aaKnown RBP21.59■■□□□ 1.05
MMP9-201ENST00000372330 HSPA4P34932 840 aa21.58■■□□□ 1.05
MMP9-201ENST00000372330 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.58■■□□□ 1.05
MMP9-201ENST00000372330 LIMCH1Q9UPQ0 1083 aa21.58■■□□□ 1.05
MMP9-201ENST00000372330 V9GYY5 206 aaPredicted RBP21.58■■□□□ 1.05
MMP9-201ENST00000372330 APBB1O00213 710 aa21.58■■□□□ 1.04
MMP9-201ENST00000372330 RBM33Q96EV2 1170 aaKnown RBP21.58■■□□□ 1.04
MMP9-201ENST00000372330 CWC15Q9P013 229 aaKnown RBP21.58■■□□□ 1.04
MMP9-201ENST00000372330 ATP8B1O43520 1251 aa21.57■■□□□ 1.04
MMP9-201ENST00000372330 NOP2P46087 812 aaKnown RBP21.57■■□□□ 1.04
MMP9-201ENST00000372330 DNM1Q05193 864 aaKnown RBP21.57■■□□□ 1.04
MMP9-201ENST00000372330 ANO6Q4KMQ2 910 aa21.57■■□□□ 1.04
MMP9-201ENST00000372330 TUBB4AP04350 444 aa21.57■■□□□ 1.04
MMP9-201ENST00000372330 PNMA6AP0CW24 399 aaPredicted RBP21.57■■□□□ 1.04
MMP9-201ENST00000372330 L2HGDHQ9H9P8 463 aa21.57■■□□□ 1.04
MMP9-201ENST00000372330 MARF1Q9Y4F3 1742 aaKnown RBP21.57■■□□□ 1.04
MMP9-201ENST00000372330 CERS3Q8IU89 383 aa21.56■■□□□ 1.04
MMP9-201ENST00000372330 ARGLU1Q9NWB6 273 aaPredicted RBP21.56■■□□□ 1.04
MMP9-201ENST00000372330 HOXC9P31274 260 aa21.56■■□□□ 1.04
MMP9-201ENST00000372330 SARM1Q6SZW1 724 aa21.56■■□□□ 1.04
MMP9-201ENST00000372330 RBM43Q6ZSC3 357 aaKnown RBP21.56■■□□□ 1.04
MMP9-201ENST00000372330 TNMDQ9H2S6 317 aa21.56■■□□□ 1.04
MMP9-201ENST00000372330 PLA2G4AP47712 749 aa21.55■■□□□ 1.04
MMP9-201ENST00000372330 MMP14P50281 582 aa21.55■■□□□ 1.04
MMP9-201ENST00000372330 G2E3Q7L622 706 aa21.55■■□□□ 1.04
MMP9-201ENST00000372330 GTF3C6Q969F1 213 aa21.55■■□□□ 1.04
MMP9-201ENST00000372330 MRFAP1L1Q96HT8 127 aa21.55■■□□□ 1.04
MMP9-201ENST00000372330 DDX19AQ9NUU7 478 aaKnown RBP21.55■■□□□ 1.04
MMP9-201ENST00000372330 FILIP1Q7Z7B0 1213 aa21.55■■□□□ 1.04
MMP9-201ENST00000372330 SKILP12757 684 aa21.54■■□□□ 1.04
MMP9-201ENST00000372330 CCT4P50991 539 aaKnown RBP21.54■■□□□ 1.04
MMP9-201ENST00000372330 MTMR6Q9Y217 621 aa21.54■■□□□ 1.04
MMP9-201ENST00000372330 ERBB3P21860 1342 aa21.54■■□□□ 1.04
MMP9-201ENST00000372330 SALL3Q9BXA9 1300 aa21.54■■□□□ 1.04
MMP9-201ENST00000372330 DHX16O60231 1041 aaKnown RBP21.54■■□□□ 1.04
MMP9-201ENST00000372330 CASQ1P31415 396 aa21.54■■□□□ 1.04
MMP9-201ENST00000372330 ZNF165P49910 485 aa21.54■■□□□ 1.04
MMP9-201ENST00000372330 CLCN6P51797 869 aa21.54■■□□□ 1.04
MMP9-201ENST00000372330 CCDC144BQ3MJ40 725 aa21.54■■□□□ 1.04
MMP9-201ENST00000372330 CCDC144CPQ8IYA2 1237 aa21.54■■□□□ 1.04
MMP9-201ENST00000372330 TTC14Q96N46 770 aa21.54■■□□□ 1.04
MMP9-201ENST00000372330 GNAT3A8MTJ3 354 aa21.53■■□□□ 1.04
MMP9-201ENST00000372330 KRT85P78386 507 aa21.53■■□□□ 1.04
MMP9-201ENST00000372330 CCAR2Q8N163 923 aaKnown RBP21.53■■□□□ 1.04
MMP9-201ENST00000372330 ZRANB2O95218 330 aaKnown RBP eCLIP21.52■■□□□ 1.04
MMP9-201ENST00000372330 SLC4A10Q6U841 1118 aa21.52■■□□□ 1.04
MMP9-201ENST00000372330 STK31Q9BXU1 1019 aa21.52■■□□□ 1.04
MMP9-201ENST00000372330 DNAJC5Q9H3Z4 198 aa21.52■■□□□ 1.04
MMP9-201ENST00000372330 USP27XA6NNY8 438 aa21.52■■□□□ 1.04
MMP9-201ENST00000372330 F6X3S4 739 aa21.52■■□□□ 1.04
MMP9-201ENST00000372330 MYO1CO00159 1063 aa21.52■■□□□ 1.04
MMP9-201ENST00000372330 TMCO3Q6UWJ1 677 aa21.52■■□□□ 1.04
MMP9-201ENST00000372330 SYT10Q6XYQ8 523 aa21.52■■□□□ 1.04
MMP9-201ENST00000372330 KRBA2Q6ZNG9 492 aa21.52■■□□□ 1.04
MMP9-201ENST00000372330 ABTB2Q8N961 1025 aa21.52■■□□□ 1.04
MMP9-201ENST00000372330 BRMS1Q9HCU9 246 aa21.52■■□□□ 1.04
MMP9-201ENST00000372330 LRRC37A3O60309 1634 aa21.51■■□□□ 1.03
MMP9-201ENST00000372330 GTF2A1P52655 376 aaPredicted RBP21.51■■□□□ 1.03
MMP9-201ENST00000372330 ERCC6LQ2NKX8 1250 aa21.51■■□□□ 1.03
MMP9-201ENST00000372330 GOLGA6L1Q8N7Z2 621 aa21.51■■□□□ 1.03
MMP9-201ENST00000372330 USP54Q70EL1 1684 aa21.51■■□□□ 1.03
MMP9-201ENST00000372330 NWD1Q149M9 1564 aa21.5■■□□□ 1.03
MMP9-201ENST00000372330 CAMK4Q16566 473 aa21.5■■□□□ 1.03
MMP9-201ENST00000372330 ICE2Q659A1 982 aa21.5■■□□□ 1.03
MMP9-201ENST00000372330 AK2P54819 239 aa21.5■■□□□ 1.03
MMP9-201ENST00000372330 ZSCAN26Q16670 478 aa21.5■■□□□ 1.03
MMP9-201ENST00000372330 SECISBP2LQ93073 1101 aaKnown RBP21.5■■□□□ 1.03
MMP9-201ENST00000372330 RILPL2Q969X0 211 aa21.5■■□□□ 1.03
MMP9-201ENST00000372330 STAP2Q9UGK3 403 aa21.5■■□□□ 1.03
MMP9-201ENST00000372330 LRRFIP2Q9Y608 721 aaKnown RBP21.5■■□□□ 1.03
MMP9-201ENST00000372330 NEK11Q8NG66 645 aa21.49■■□□□ 1.03
MMP9-201ENST00000372330 UBXN6Q9BZV1 441 aa21.49■■□□□ 1.03
MMP9-201ENST00000372330 GJB2P29033 226 aa21.49■■□□□ 1.03
MMP9-201ENST00000372330 CCDC93Q567U6 631 aa21.49■■□□□ 1.03
MMP9-201ENST00000372330 CCDC30Q5VVM6 783 aa21.49■■□□□ 1.03
MMP9-201ENST00000372330 ZSCAN31Q96LW9 406 aaPredicted RBP21.49■■□□□ 1.03
MMP9-201ENST00000372330 CLSTN2Q9H4D0 955 aa21.49■■□□□ 1.03
MMP9-201ENST00000372330 GOLGA6L4A6NEF3 574 aa21.48■■□□□ 1.03
MMP9-201ENST00000372330 GOLGA6L19H0YKK7 550 aa21.48■■□□□ 1.03
MMP9-201ENST00000372330 TPM1P09493 284 aa21.48■■□□□ 1.03
MMP9-201ENST00000372330 LIG1P18858 919 aa21.48■■□□□ 1.03
MMP9-201ENST00000372330 RUFY3Q7L099 469 aa21.48■■□□□ 1.03
MMP9-201ENST00000372330 TTC6Q86TZ1 520 aa21.48■■□□□ 1.03
MMP9-201ENST00000372330 LTV1Q96GA3 475 aaPredicted RBP21.48■■□□□ 1.03
MMP9-201ENST00000372330 SCAND2PQ9GZW5 306 aaPredicted RBP21.48■■□□□ 1.03
MMP9-201ENST00000372330 DACT1Q9NYF0 836 aa21.48■■□□□ 1.03
MMP9-201ENST00000372330 MAP3K5Q99683 1374 aa21.48■■□□□ 1.03
MMP9-201ENST00000372330 FLIIQ13045 1269 aa21.47■■□□□ 1.03
MMP9-201ENST00000372330 CKAP2LQ8IYA6 745 aa21.47■■□□□ 1.03
MMP9-201ENST00000372330 GOLGA5Q8TBA6 731 aa21.47■■□□□ 1.03
MMP9-201ENST00000372330 LRRCC1Q9C099 1032 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms