RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 NLRP3Q96P20 1036 aa24.53■■□□□ 1.52
TMEM53-201ENST00000372235 TMX4Q9H1E5 349 aaPredicted RBP24.53■■□□□ 1.52
TMEM53-201ENST00000372235 ZNF316A6NFI3 1004 aaPredicted RBP24.52■■□□□ 1.52
TMEM53-201ENST00000372235 PRELPP51888 382 aa24.52■■□□□ 1.52
TMEM53-201ENST00000372235 NTSR2O95665 410 aa24.51■■□□□ 1.51
TMEM53-201ENST00000372235 AIMP1Q12904 312 aaKnown RBP24.51■■□□□ 1.51
TMEM53-201ENST00000372235 SMC1BQ8NDV3 1235 aa24.51■■□□□ 1.51
TMEM53-201ENST00000372235 XAGE3Q8WTP9 111 aa24.51■■□□□ 1.51
TMEM53-201ENST00000372235 HYPKQ9NX55 129 aa24.51■■□□□ 1.51
TMEM53-201ENST00000372235 TIAM2Q8IVF5 1701 aa24.51■■□□□ 1.51
TMEM53-201ENST00000372235 ANP32CO43423 234 aa24.5■■□□□ 1.51
TMEM53-201ENST00000372235 ZNF853P0CG23 659 aa24.5■■□□□ 1.51
TMEM53-201ENST00000372235 TCIRG1Q13488 830 aa24.5■■□□□ 1.51
TMEM53-201ENST00000372235 PROSER3Q2NL68 480 aa24.5■■□□□ 1.51
TMEM53-201ENST00000372235 SLC10A5Q5PT55 438 aa24.5■■□□□ 1.51
TMEM53-201ENST00000372235 NECTIN2Q92692 538 aa24.5■■□□□ 1.51
TMEM53-201ENST00000372235 CRAMP1Q96RY5 1269 aa24.5■■□□□ 1.51
TMEM53-201ENST00000372235 MBIPQ9NS73 344 aa24.5■■□□□ 1.51
TMEM53-201ENST00000372235 DICER1Q9UPY3 1922 aaKnown RBP24.5■■□□□ 1.51
TMEM53-201ENST00000372235 ABCC12Q96J65 1359 aa24.5■■□□□ 1.51
TMEM53-201ENST00000372235 CCDC88AQ3V6T2 1871 aa24.49■■□□□ 1.51
TMEM53-201ENST00000372235 DUSP27Q5VZP5 1158 aa24.49■■□□□ 1.51
TMEM53-201ENST00000372235 CHPF2Q9P2E5 772 aa24.49■■□□□ 1.51
TMEM53-201ENST00000372235 CACNA1SQ13698 1873 aa24.49■■□□□ 1.51
TMEM53-201ENST00000372235 ANXA1P04083 346 aa24.48■■□□□ 1.51
TMEM53-201ENST00000372235 PLBD2Q8NHP8 589 aa24.48■■□□□ 1.51
TMEM53-201ENST00000372235 PSMD1Q99460 953 aa24.48■■□□□ 1.51
TMEM53-201ENST00000372235 NCBP3Q53F19 620 aaKnown RBP24.47■■□□□ 1.51
TMEM53-201ENST00000372235 ANKRD13DQ6ZTN6 518 aa24.47■■□□□ 1.51
TMEM53-201ENST00000372235 KRT24Q2M2I5 525 aa24.46■■□□□ 1.51
TMEM53-201ENST00000372235 SH3TC1Q8TE82 1336 aa24.45■■□□□ 1.5
TMEM53-201ENST00000372235 IQCA1LA6NCM1 817 aa24.45■■□□□ 1.5
TMEM53-201ENST00000372235 CCDC27Q2M243 656 aa24.45■■□□□ 1.5
TMEM53-201ENST00000372235 NLRP10Q86W26 655 aa24.45■■□□□ 1.5
TMEM53-201ENST00000372235 WDR90Q96KV7 1748 aa24.44■■□□□ 1.5
TMEM53-201ENST00000372235 TRMT112Q9UI30 125 aaKnown RBP24.44■■□□□ 1.5
TMEM53-201ENST00000372235 PPEF1O14829 653 aaPredicted RBP24.43■■□□□ 1.5
TMEM53-201ENST00000372235 IARSP41252 1262 aaKnown RBP24.43■■□□□ 1.5
TMEM53-201ENST00000372235 SYNE4Q8N205 404 aa24.43■■□□□ 1.5
TMEM53-201ENST00000372235 JDP2Q8WYK2 163 aa24.43■■□□□ 1.5
TMEM53-201ENST00000372235 ANKRD36CQ5JPF3 1778 aa24.42■■□□□ 1.5
TMEM53-201ENST00000372235 BBOX1O75936 387 aa24.42■■□□□ 1.5
TMEM53-201ENST00000372235 HSP90B1P14625 803 aaKnown RBP24.42■■□□□ 1.5
TMEM53-201ENST00000372235 GOLGA2Q08379 1002 aa24.42■■□□□ 1.5
TMEM53-201ENST00000372235 VPS33BQ9H267 617 aa24.42■■□□□ 1.5
TMEM53-201ENST00000372235 ZNF277Q9NRM2 450 aaPredicted RBP24.42■■□□□ 1.5
TMEM53-201ENST00000372235 MRS2Q9HD23 443 aa24.41■■□□□ 1.5
TMEM53-201ENST00000372235 CCDC30Q5VVM6 783 aa24.4■■□□□ 1.5
TMEM53-201ENST00000372235 TMC4Q7Z404 712 aa24.4■■□□□ 1.5
TMEM53-201ENST00000372235 L3MBTL3Q96JM7 780 aaPredicted RBP24.4■■□□□ 1.5
TMEM53-201ENST00000372235 DDX58O95786 925 aaKnown RBP24.39■■□□□ 1.49
TMEM53-201ENST00000372235 TRIM28Q13263 835 aaKnown RBP24.39■■□□□ 1.49
TMEM53-201ENST00000372235 DDX46Q7L014 1031 aaKnown RBP24.39■■□□□ 1.49
TMEM53-201ENST00000372235 SUPT20HQ8NEM7 779 aa24.39■■□□□ 1.49
TMEM53-201ENST00000372235 DDNO94850 711 aaPredicted RBP24.38■■□□□ 1.49
TMEM53-201ENST00000372235 RIC3Q7Z5B4 369 aa24.38■■□□□ 1.49
TMEM53-201ENST00000372235 ATP6V0A2Q9Y487 856 aa24.38■■□□□ 1.49
TMEM53-201ENST00000372235 FZD9O00144 591 aa24.37■■□□□ 1.49
TMEM53-201ENST00000372235 ISCA1Q9BUE6 129 aa24.37■■□□□ 1.49
TMEM53-201ENST00000372235 IL16Q14005 1332 aa24.36■■□□□ 1.49
TMEM53-201ENST00000372235 POTECB2RU33 542 aa24.36■■□□□ 1.49
TMEM53-201ENST00000372235 EIF6P56537 245 aaKnown RBP24.36■■□□□ 1.49
TMEM53-201ENST00000372235 OLFM4Q6UX06 510 aa24.36■■□□□ 1.49
TMEM53-201ENST00000372235 SNED1Q8TER0 1413 aa24.35■■□□□ 1.49
TMEM53-201ENST00000372235 WWC1Q8IX03 1113 aa24.35■■□□□ 1.49
TMEM53-201ENST00000372235 SP8Q8IXZ3 490 aa24.35■■□□□ 1.49
TMEM53-201ENST00000372235 GPC2Q8N158 579 aa24.35■■□□□ 1.49
TMEM53-201ENST00000372235 ABCC4O15439 1325 aa24.35■■□□□ 1.49
TMEM53-201ENST00000372235 ELL2O00472 640 aaPredicted RBP24.34■■□□□ 1.49
TMEM53-201ENST00000372235 HCLS1P14317 486 aaPredicted RBP24.34■■□□□ 1.49
TMEM53-201ENST00000372235 GRAPQ13588 217 aa24.34■■□□□ 1.49
TMEM53-201ENST00000372235 C3orf67Q6ZVT6 689 aa24.34■■□□□ 1.49
TMEM53-201ENST00000372235 GRAPLQ8TC17 118 aaPredicted RBP24.34■■□□□ 1.49
TMEM53-201ENST00000372235 STK31Q9BXU1 1019 aa24.34■■□□□ 1.49
TMEM53-201ENST00000372235 CCDC184Q52MB2 194 aa24.33■■□□□ 1.49
TMEM53-201ENST00000372235 CHADLQ6NUI6 762 aa24.33■■□□□ 1.49
TMEM53-201ENST00000372235 PNMA8AQ86V59 439 aaPredicted RBP24.33■■□□□ 1.49
TMEM53-201ENST00000372235 LARGE2Q8N3Y3 721 aa24.33■■□□□ 1.49
TMEM53-201ENST00000372235 SCN4AP35499 1836 aa24.33■■□□□ 1.48
TMEM53-201ENST00000372235 C8orf58Q8NAV2 365 aa24.32■■□□□ 1.48
TMEM53-201ENST00000372235 HACL1Q9UJ83 578 aa24.32■■□□□ 1.48
TMEM53-201ENST00000372235 ATP5J2-PTCD1G3V325 749 aa24.31■■□□□ 1.48
TMEM53-201ENST00000372235 SF3B3Q15393 1217 aaKnown RBP24.31■■□□□ 1.48
TMEM53-201ENST00000372235 LDHDQ86WU2 507 aa24.31■■□□□ 1.48
TMEM53-201ENST00000372235 NIM1KQ8IY84 436 aa24.31■■□□□ 1.48
TMEM53-201ENST00000372235 CCDC191Q8NCU4 936 aa24.31■■□□□ 1.48
TMEM53-201ENST00000372235 TCERG1O14776 1098 aaKnown RBP24.3■■□□□ 1.48
TMEM53-201ENST00000372235 DPP8Q6V1X1 898 aaPredicted RBP24.3■■□□□ 1.48
TMEM53-201ENST00000372235 MPNDQ8N594 471 aa24.3■■□□□ 1.48
TMEM53-201ENST00000372235 DNAJC5GQ8N7S2 189 aa24.3■■□□□ 1.48
TMEM53-201ENST00000372235 ZBTB38Q8NAP3 1195 aaPredicted RBP24.3■■□□□ 1.48
TMEM53-201ENST00000372235 FAM89AQ96GI7 184 aa24.3■■□□□ 1.48
TMEM53-201ENST00000372235 RTFDC1Q9BY42 306 aaPredicted RBP24.3■■□□□ 1.48
TMEM53-201ENST00000372235 TAF1DQ9H5J8 278 aaPredicted RBP24.3■■□□□ 1.48
TMEM53-201ENST00000372235 ZNF541Q9H0D2 1346 aa24.3■■□□□ 1.48
TMEM53-201ENST00000372235 WDR63Q8IWG1 891 aa24.29■■□□□ 1.48
TMEM53-201ENST00000372235 PHAXQ9H814 394 aaKnown RBP24.29■■□□□ 1.48
TMEM53-201ENST00000372235 PPIP5K2O43314 1243 aa24.28■■□□□ 1.48
TMEM53-201ENST00000372235 LMOD1P29536 600 aaPredicted RBP24.28■■□□□ 1.48
TMEM53-201ENST00000372235 KLRG1Q96E93 195 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms