RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 DHX57Q6P158 1386 aaKnown RBP17.47■□□□□ 0.39
GTF3C4-201ENST00000372146 BCAR3O75815 825 aa17.47■□□□□ 0.39
GTF3C4-201ENST00000372146 PPP4R3AQ6IN85 833 aa17.47■□□□□ 0.39
GTF3C4-201ENST00000372146 ZSCAN25Q6NSZ9 544 aa17.47■□□□□ 0.39
GTF3C4-201ENST00000372146 CCDC77Q9BR77 488 aa17.47■□□□□ 0.39
GTF3C4-201ENST00000372146 CCDC38Q502W7 563 aa17.47■□□□□ 0.39
GTF3C4-201ENST00000372146 RUSC2Q8N2Y8 1516 aa17.46■□□□□ 0.39
GTF3C4-201ENST00000372146 PUF60Q9UHX1 559 aaKnown RBP17.46■□□□□ 0.39
GTF3C4-201ENST00000372146 LCA5Q86VQ0 697 aa17.46■□□□□ 0.39
GTF3C4-201ENST00000372146 TRIM4Q9C037 500 aa17.46■□□□□ 0.39
GTF3C4-201ENST00000372146 DDX19AQ9NUU7 478 aaKnown RBP17.46■□□□□ 0.39
GTF3C4-201ENST00000372146 PHAXQ9H814 394 aaKnown RBP17.46■□□□□ 0.39
GTF3C4-201ENST00000372146 GDPD2Q9HCC8 539 aa17.46■□□□□ 0.39
GTF3C4-201ENST00000372146 VIMP08670 466 aaKnown RBP17.46■□□□□ 0.39
GTF3C4-201ENST00000372146 PHLDB2Q86SQ0 1253 aa17.46■□□□□ 0.39
GTF3C4-201ENST00000372146 ZBTB12Q9Y330 459 aaPredicted RBP17.46■□□□□ 0.39
GTF3C4-201ENST00000372146 SF3B2Q13435 895 aaKnown RBP17.46■□□□□ 0.38
GTF3C4-201ENST00000372146 CTCFLQ8NI51 663 aaPredicted RBP17.46■□□□□ 0.38
GTF3C4-201ENST00000372146 CXorf38Q8TB03 319 aa17.46■□□□□ 0.38
GTF3C4-201ENST00000372146 CTNNA3Q9UI47 895 aa17.46■□□□□ 0.38
GTF3C4-201ENST00000372146 HCLS1P14317 486 aaPredicted RBP17.45■□□□□ 0.38
GTF3C4-201ENST00000372146 GUCY1B3Q02153 619 aa17.45■□□□□ 0.38
GTF3C4-201ENST00000372146 TNIP1Q15025 636 aa17.45■□□□□ 0.38
GTF3C4-201ENST00000372146 TCERG1LQ5VWI1 586 aa17.45■□□□□ 0.38
GTF3C4-201ENST00000372146 RNF10Q8N5U6 811 aaKnown RBP17.45■□□□□ 0.38
GTF3C4-201ENST00000372146 UBE2HP62256 183 aa17.45■□□□□ 0.38
GTF3C4-201ENST00000372146 UVSSAQ2YD98 709 aa17.45■□□□□ 0.38
GTF3C4-201ENST00000372146 ADAMTS8Q9UP79 889 aa17.45■□□□□ 0.38
GTF3C4-201ENST00000372146 TBC1D5Q92609 795 aa17.45■□□□□ 0.38
GTF3C4-201ENST00000372146 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.44■□□□□ 0.38
GTF3C4-201ENST00000372146 MIA2Q96PC5 1412 aa17.44■□□□□ 0.38
GTF3C4-201ENST00000372146 TXNDC9O14530 226 aa17.44■□□□□ 0.38
GTF3C4-201ENST00000372146 CCDC25Q86WR0 208 aa17.44■□□□□ 0.38
GTF3C4-201ENST00000372146 KLHL34Q8N239 644 aa17.44■□□□□ 0.38
GTF3C4-201ENST00000372146 MICAL1Q8TDZ2 1067 aa17.44■□□□□ 0.38
GTF3C4-201ENST00000372146 SPINK5Q9NQ38 1064 aaPredicted RBP17.44■□□□□ 0.38
GTF3C4-201ENST00000372146 TTC12Q9H892 705 aaPredicted RBP17.44■□□□□ 0.38
GTF3C4-201ENST00000372146 TUBB4BP68371 445 aa17.44■□□□□ 0.38
GTF3C4-201ENST00000372146 CCDC7Q96M83 1385 aa17.44■□□□□ 0.38
GTF3C4-201ENST00000372146 ANO6Q4KMQ2 910 aa17.44■□□□□ 0.38
GTF3C4-201ENST00000372146 SH3BP5O60239 455 aa17.44■□□□□ 0.38
GTF3C4-201ENST00000372146 CCT4P50991 539 aaKnown RBP17.44■□□□□ 0.38
GTF3C4-201ENST00000372146 RBBP5Q15291 538 aaKnown RBP17.44■□□□□ 0.38
GTF3C4-201ENST00000372146 LRSAM1Q6UWE0 723 aa17.44■□□□□ 0.38
GTF3C4-201ENST00000372146 ALDH3A1P30838 453 aa17.44■□□□□ 0.38
GTF3C4-201ENST00000372146 CCDC40Q4G0X9 1142 aa17.44■□□□□ 0.38
GTF3C4-201ENST00000372146 DACT3Q96B18 629 aaPredicted RBP17.44■□□□□ 0.38
GTF3C4-201ENST00000372146 ATP2A1O14983 1001 aa17.43■□□□□ 0.38
GTF3C4-201ENST00000372146 PTGS1P23219 599 aa17.43■□□□□ 0.38
GTF3C4-201ENST00000372146 ZC3H6P61129 1189 aaKnown RBP17.43■□□□□ 0.38
GTF3C4-201ENST00000372146 MCUR1Q96AQ8 359 aa17.43■□□□□ 0.38
GTF3C4-201ENST00000372146 PRPF31Q8WWY3 499 aaKnown RBP17.43■□□□□ 0.38
GTF3C4-201ENST00000372146 SEPT8Q92599 483 aa17.43■□□□□ 0.38
GTF3C4-201ENST00000372146 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.43■□□□□ 0.38
GTF3C4-201ENST00000372146 WASHC2CQ9Y4E1 1318 aa17.43■□□□□ 0.38
GTF3C4-201ENST00000372146 MGEA5O60502 916 aa17.43■□□□□ 0.38
GTF3C4-201ENST00000372146 ZNF131P52739 623 aa17.43■□□□□ 0.38
GTF3C4-201ENST00000372146 TMEM57Q8N5G2 664 aa17.43■□□□□ 0.38
GTF3C4-201ENST00000372146 PDCD7Q8N8D1 485 aaKnown RBP17.43■□□□□ 0.38
GTF3C4-201ENST00000372146 CAVIN2O95810 425 aa17.42■□□□□ 0.38
GTF3C4-201ENST00000372146 RAB34Q9BZG1 259 aa17.42■□□□□ 0.38
GTF3C4-201ENST00000372146 U3KPZ7 1027 aaPredicted RBP17.42■□□□□ 0.38
GTF3C4-201ENST00000372146 SYT1P21579 422 aa17.42■□□□□ 0.38
GTF3C4-201ENST00000372146 DBN1Q16643 649 aa17.42■□□□□ 0.38
GTF3C4-201ENST00000372146 LRRC45Q96CN5 670 aa17.42■□□□□ 0.38
GTF3C4-201ENST00000372146 FRMD3A2A2Y4 597 aa17.42■□□□□ 0.38
GTF3C4-201ENST00000372146 NDUFAB1O14561 156 aa17.42■□□□□ 0.38
GTF3C4-201ENST00000372146 TMEM266Q2M3C6 531 aa17.42■□□□□ 0.38
GTF3C4-201ENST00000372146 SYNCQ9H7C4 482 aa17.42■□□□□ 0.38
GTF3C4-201ENST00000372146 CFAP65Q6ZU64 1925 aaKnown RBP17.42■□□□□ 0.38
GTF3C4-201ENST00000372146 FYB2Q5VWT5 728 aa17.42■□□□□ 0.38
GTF3C4-201ENST00000372146 SH2B1Q9NRF2 756 aaPredicted RBP17.42■□□□□ 0.38
GTF3C4-201ENST00000372146 MUM1Q2TAK8 710 aa17.42■□□□□ 0.38
GTF3C4-201ENST00000372146 MTUS1Q9ULD2 1270 aa17.41■□□□□ 0.38
GTF3C4-201ENST00000372146 PSMD6Q15008 389 aa17.41■□□□□ 0.38
GTF3C4-201ENST00000372146 CCDC62Q6P9F0 684 aa17.41■□□□□ 0.38
GTF3C4-201ENST00000372146 GIMAP6Q6P9H5 292 aa17.41■□□□□ 0.38
GTF3C4-201ENST00000372146 VPS52Q8N1B4 723 aa17.41■□□□□ 0.38
GTF3C4-201ENST00000372146 ARHGAP25P42331 645 aa17.41■□□□□ 0.38
GTF3C4-201ENST00000372146 CETN3O15182 167 aa17.41■□□□□ 0.38
GTF3C4-201ENST00000372146 RBM5P52756 815 aaKnown RBP eCLIP17.41■□□□□ 0.38
GTF3C4-201ENST00000372146 ATICP31939 592 aa17.41■□□□□ 0.38
GTF3C4-201ENST00000372146 TWISTNBQ3B726 338 aaPredicted RBP17.41■□□□□ 0.38
GTF3C4-201ENST00000372146 MMRN2Q9H8L6 949 aa17.41■□□□□ 0.38
GTF3C4-201ENST00000372146 EFCAB2Q5VUJ9 269 aa17.4■□□□□ 0.38
GTF3C4-201ENST00000372146 ERCC5P28715 1186 aaPredicted RBP17.4■□□□□ 0.38
GTF3C4-201ENST00000372146 CYLC1P35663 651 aaPredicted RBP17.4■□□□□ 0.38
GTF3C4-201ENST00000372146 ANKRD24Q8TF21 1146 aa17.4■□□□□ 0.38
GTF3C4-201ENST00000372146 OPHN1O60890 802 aa17.4■□□□□ 0.38
GTF3C4-201ENST00000372146 RAB11FIP3O75154 756 aa17.4■□□□□ 0.38
GTF3C4-201ENST00000372146 FCHSD2O94868 740 aa17.4■□□□□ 0.38
GTF3C4-201ENST00000372146 CTAGE1Q96RT6 745 aa17.4■□□□□ 0.38
GTF3C4-201ENST00000372146 HSPA1LP34931 641 aa17.4■□□□□ 0.38
GTF3C4-201ENST00000372146 VAV2P52735 878 aa17.4■□□□□ 0.38
GTF3C4-201ENST00000372146 SMG6Q86US8 1419 aaKnown RBP17.4■□□□□ 0.38
GTF3C4-201ENST00000372146 TMEM110-MUSTN1A8MSY1 372 aa17.4■□□□□ 0.38
GTF3C4-201ENST00000372146 HSP90AA4PQ58FG1 418 aa17.4■□□□□ 0.38
GTF3C4-201ENST00000372146 MRFAP1L1Q96HT8 127 aa17.4■□□□□ 0.38
GTF3C4-201ENST00000372146 VPS41P49754 854 aa17.4■□□□□ 0.38
GTF3C4-201ENST00000372146 PFDN4Q9NQP4 134 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms