RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 MRE11P49959 708 aa14.15□□□□□ -0.14
PDE6C-201ENST00000371447 SYCE3A1L190 88 aa14.15□□□□□ -0.14
PDE6C-201ENST00000371447 SKOR2Q2VWA4 1001 aaPredicted RBP14.15□□□□□ -0.14
PDE6C-201ENST00000371447 FERMT3Q86UX7 667 aa14.15□□□□□ -0.14
PDE6C-201ENST00000371447 SYNE4Q8N205 404 aa14.15□□□□□ -0.14
PDE6C-201ENST00000371447 LMBRD1Q9NUN5 540 aa14.15□□□□□ -0.14
PDE6C-201ENST00000371447 HDAC5Q9UQL6 1122 aa14.15□□□□□ -0.14
PDE6C-201ENST00000371447 RBM8AQ9Y5S9 174 aaKnown RBP14.15□□□□□ -0.14
PDE6C-201ENST00000371447 RAD50Q92878 1312 aa14.14□□□□□ -0.15
PDE6C-201ENST00000371447 TRIM44Q96DX7 344 aaPredicted RBP14.14□□□□□ -0.15
PDE6C-201ENST00000371447 ASAP1Q9ULH1 1129 aa14.14□□□□□ -0.15
PDE6C-201ENST00000371447 ZNF589Q86UQ0 364 aaPredicted RBP14.14□□□□□ -0.15
PDE6C-201ENST00000371447 PDRG1Q9NUG6 133 aa14.14□□□□□ -0.15
PDE6C-201ENST00000371447 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.13□□□□□ -0.15
PDE6C-201ENST00000371447 FIBPO43427 364 aa14.13□□□□□ -0.15
PDE6C-201ENST00000371447 FGD1P98174 961 aa14.13□□□□□ -0.15
PDE6C-201ENST00000371447 PDE4CQ08493 712 aa14.13□□□□□ -0.15
PDE6C-201ENST00000371447 GPT2Q8TD30 523 aa14.13□□□□□ -0.15
PDE6C-201ENST00000371447 EVI5LQ96CN4 794 aa14.13□□□□□ -0.15
PDE6C-201ENST00000371447 RRAGDQ9NQL2 400 aaPredicted RBP14.13□□□□□ -0.15
PDE6C-201ENST00000371447 BTG4Q9NY30 223 aa14.13□□□□□ -0.15
PDE6C-201ENST00000371447 DBNLQ9UJU6 430 aaKnown RBP14.13□□□□□ -0.15
PDE6C-201ENST00000371447 FSD2A1L4K1 749 aa14.13□□□□□ -0.15
PDE6C-201ENST00000371447 ADAMTS2O95450 1211 aa14.13□□□□□ -0.15
PDE6C-201ENST00000371447 IL2RBP14784 551 aa14.13□□□□□ -0.15
PDE6C-201ENST00000371447 ZKSCAN1P17029 563 aaPredicted RBP14.13□□□□□ -0.15
PDE6C-201ENST00000371447 HSP90AB3PQ58FF7 597 aa14.13□□□□□ -0.15
PDE6C-201ENST00000371447 RUFY3Q7L099 469 aa14.13□□□□□ -0.15
PDE6C-201ENST00000371447 FAM89AQ96GI7 184 aa14.13□□□□□ -0.15
PDE6C-201ENST00000371447 SMC3Q9UQE7 1217 aa14.13□□□□□ -0.15
PDE6C-201ENST00000371447 GOLIM4O00461 696 aa14.12□□□□□ -0.15
PDE6C-201ENST00000371447 FAM208AQ9UK61 1670 aaKnown RBP14.12□□□□□ -0.15
PDE6C-201ENST00000371447 GADD45BO75293 160 aaPredicted RBP14.12□□□□□ -0.15
PDE6C-201ENST00000371447 PTPN12Q05209 780 aaKnown RBP14.12□□□□□ -0.15
PDE6C-201ENST00000371447 ZSCAN23Q3MJ62 389 aa14.12□□□□□ -0.15
PDE6C-201ENST00000371447 LRRC24Q50LG9 513 aa14.12□□□□□ -0.15
PDE6C-201ENST00000371447 PUS3Q9BZE2 481 aaKnown RBP14.12□□□□□ -0.15
PDE6C-201ENST00000371447 DNAJC5Q9H3Z4 198 aa14.12□□□□□ -0.15
PDE6C-201ENST00000371447 TTC41PQ6P2S7 1318 aa14.12□□□□□ -0.15
PDE6C-201ENST00000371447 RGPD5Q99666 1765 aa14.12□□□□□ -0.15
PDE6C-201ENST00000371447 NASPP49321 788 aaPredicted RBP14.12□□□□□ -0.15
PDE6C-201ENST00000371447 FKBP4Q02790 459 aaKnown RBP eCLIP14.12□□□□□ -0.15
PDE6C-201ENST00000371447 MTX1Q13505 466 aa14.12□□□□□ -0.15
PDE6C-201ENST00000371447 TAF7LQ5H9L4 462 aa14.12□□□□□ -0.15
PDE6C-201ENST00000371447 GORABQ5T7V8 394 aa14.12□□□□□ -0.15
PDE6C-201ENST00000371447 FAM173BQ6P4H8 233 aa14.12□□□□□ -0.15
PDE6C-201ENST00000371447 TMOD3Q9NYL9 352 aa14.12□□□□□ -0.15
PDE6C-201ENST00000371447 PRIM1P49642 420 aaKnown RBP14.11□□□□□ -0.15
PDE6C-201ENST00000371447 PLCB2Q00722 1185 aa14.11□□□□□ -0.15
PDE6C-201ENST00000371447 KLHL40Q2TBA0 621 aa14.11□□□□□ -0.15
PDE6C-201ENST00000371447 DNAJC10Q8IXB1 793 aa14.11□□□□□ -0.15
PDE6C-201ENST00000371447 CYP46A1Q9Y6A2 500 aa14.11□□□□□ -0.15
PDE6C-201ENST00000371447 MED1Q15648 1581 aaPredicted RBP14.11□□□□□ -0.15
PDE6C-201ENST00000371447 TNNI3KQ59H18 835 aa14.11□□□□□ -0.15
PDE6C-201ENST00000371447 FPGT-TNNI3KV9GXZ4 949 aa14.11□□□□□ -0.15
PDE6C-201ENST00000371447 MCM2P49736 904 aa14.1□□□□□ -0.15
PDE6C-201ENST00000371447 ANAPC15P60006 121 aa14.1□□□□□ -0.15
PDE6C-201ENST00000371447 CREB3L3Q68CJ9 461 aa14.1□□□□□ -0.15
PDE6C-201ENST00000371447 LIMCH1Q9UPQ0 1083 aa14.1□□□□□ -0.15
PDE6C-201ENST00000371447 CNPY2Q9Y2B0 182 aa14.1□□□□□ -0.15
PDE6C-201ENST00000371447 NUTM2BA6NNL0 878 aaPredicted RBP14.1□□□□□ -0.15
PDE6C-201ENST00000371447 NUTM2EB1AL46 878 aaPredicted RBP14.1□□□□□ -0.15
PDE6C-201ENST00000371447 NUTM2AQ8IVF1 878 aaPredicted RBP14.1□□□□□ -0.15
PDE6C-201ENST00000371447 ANP32BQ92688 251 aaKnown RBP14.1□□□□□ -0.15
PDE6C-201ENST00000371447 TNS3Q68CZ2 1445 aa14.1□□□□□ -0.15
PDE6C-201ENST00000371447 CYP2E1P05181 493 aaPredicted RBP14.1□□□□□ -0.15
PDE6C-201ENST00000371447 HSP90B1P14625 803 aaKnown RBP14.1□□□□□ -0.15
PDE6C-201ENST00000371447 PLBD2Q8NHP8 589 aa14.1□□□□□ -0.15
PDE6C-201ENST00000371447 TMEM63CQ9P1W3 806 aa14.1□□□□□ -0.15
PDE6C-201ENST00000371447 AOX1Q06278 1338 aa14.1□□□□□ -0.15
PDE6C-201ENST00000371447 CCDC171Q6TFL3 1326 aa14.1□□□□□ -0.15
PDE6C-201ENST00000371447 CHST3Q7LGC8 479 aa14.09□□□□□ -0.15
PDE6C-201ENST00000371447 CWC25Q9NXE8 425 aaPredicted RBP14.09□□□□□ -0.15
PDE6C-201ENST00000371447 WDR17Q8IZU2 1322 aa14.09□□□□□ -0.15
PDE6C-201ENST00000371447 GJB2P29033 226 aa14.09□□□□□ -0.15
PDE6C-201ENST00000371447 HEG1Q9ULI3 1381 aa14.09□□□□□ -0.15
PDE6C-201ENST00000371447 DDX11Q96FC9 970 aa14.08□□□□□ -0.15
PDE6C-201ENST00000371447 TBC1D2BQ9UPU7 963 aa14.08□□□□□ -0.15
PDE6C-201ENST00000371447 NCAPD2Q15021 1401 aa14.08□□□□□ -0.15
PDE6C-201ENST00000371447 PXDNLA1KZ92 1463 aa14.08□□□□□ -0.15
PDE6C-201ENST00000371447 LRRC37A3O60309 1634 aa14.08□□□□□ -0.15
PDE6C-201ENST00000371447 ADAMTSL3P82987 1691 aa14.08□□□□□ -0.15
PDE6C-201ENST00000371447 USP48Q86UV5 1035 aa14.08□□□□□ -0.16
PDE6C-201ENST00000371447 ACSBG1Q96GR2 724 aa14.08□□□□□ -0.16
PDE6C-201ENST00000371447 PCDH11XQ9BZA7 1347 aa14.08□□□□□ -0.16
PDE6C-201ENST00000371447 PCDH11YQ9BZA8 1340 aa14.08□□□□□ -0.16
PDE6C-201ENST00000371447 KDM4AO75164 1064 aa14.08□□□□□ -0.16
PDE6C-201ENST00000371447 SYT1P21579 422 aa14.08□□□□□ -0.16
PDE6C-201ENST00000371447 VSIG10Q8N0Z9 540 aa14.08□□□□□ -0.16
PDE6C-201ENST00000371447 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.08□□□□□ -0.16
PDE6C-201ENST00000371447 BRD1O95696 1058 aa14.07□□□□□ -0.16
PDE6C-201ENST00000371447 ME3Q16798 604 aa14.07□□□□□ -0.16
PDE6C-201ENST00000371447 SLC27A2O14975 620 aa14.07□□□□□ -0.16
PDE6C-201ENST00000371447 BLOC1S2Q6QNY1 142 aa14.07□□□□□ -0.16
PDE6C-201ENST00000371447 LRP10Q7Z4F1 713 aa14.07□□□□□ -0.16
PDE6C-201ENST00000371447 RBSNQ9H1K0 784 aa14.07□□□□□ -0.16
PDE6C-201ENST00000371447 A0A0G2JLW4 131 aa14.07□□□□□ -0.16
PDE6C-201ENST00000371447 CUL4AQ13619 759 aa14.07□□□□□ -0.16
PDE6C-201ENST00000371447 TPCN1Q9ULQ1 816 aa14.07□□□□□ -0.16
PDE6C-201ENST00000371447 PI16Q6UXB8 463 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms