RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 PHF14O94880 888 aa10.36□□□□□ -0.75
SMARCA1-203ENST00000371123 CDK12Q9NYV4 1490 aaPredicted RBP10.36□□□□□ -0.75
SMARCA1-203ENST00000371123 REC8O95072 547 aa10.36□□□□□ -0.75
SMARCA1-203ENST00000371123 CHAF1AQ13111 956 aaPredicted RBP10.36□□□□□ -0.75
SMARCA1-203ENST00000371123 NRXN3Q9Y4C0 1643 aa10.36□□□□□ -0.75
SMARCA1-203ENST00000371123 A2ML1A8K2U0 1454 aa10.35□□□□□ -0.75
SMARCA1-203ENST00000371123 WDR33Q9C0J8 1336 aaKnown RBP10.35□□□□□ -0.75
SMARCA1-203ENST00000371123 STX6O43752 255 aa10.35□□□□□ -0.75
SMARCA1-203ENST00000371123 MYCNP04198 464 aaPredicted RBP10.35□□□□□ -0.75
SMARCA1-203ENST00000371123 GNAI3P08754 354 aa10.35□□□□□ -0.75
SMARCA1-203ENST00000371123 ZRSR1Q15695 479 aaKnown RBP10.35□□□□□ -0.75
SMARCA1-203ENST00000371123 CWC27Q6UX04 472 aaKnown RBP10.35□□□□□ -0.75
SMARCA1-203ENST00000371123 PACS2Q86VP3 889 aa10.35□□□□□ -0.75
SMARCA1-203ENST00000371123 PAXBP1Q9Y5B6 917 aa10.35□□□□□ -0.75
SMARCA1-203ENST00000371123 AK2P54819 239 aa10.35□□□□□ -0.75
SMARCA1-203ENST00000371123 TPD52L1Q16890 204 aaPredicted RBP10.35□□□□□ -0.75
SMARCA1-203ENST00000371123 SLFNL1Q499Z3 407 aa10.35□□□□□ -0.75
SMARCA1-203ENST00000371123 FAM200AQ8TCP9 573 aa10.35□□□□□ -0.75
SMARCA1-203ENST00000371123 MYO1CO00159 1063 aa10.35□□□□□ -0.75
SMARCA1-203ENST00000371123 CSB-PGBD3P0DP91 1061 aa10.35□□□□□ -0.75
SMARCA1-203ENST00000371123 NLRP6P59044 892 aa10.35□□□□□ -0.75
SMARCA1-203ENST00000371123 NBPF11Q86T75 865 aa10.35□□□□□ -0.75
SMARCA1-203ENST00000371123 C11orf57Q6ZUT1 292 aaPredicted RBP10.34□□□□□ -0.75
SMARCA1-203ENST00000371123 SPG7Q9UQ90 795 aa10.34□□□□□ -0.75
SMARCA1-203ENST00000371123 MAP2P11137 1827 aaKnown RBP10.34□□□□□ -0.75
SMARCA1-203ENST00000371123 YTHDC2Q9H6S0 1430 aaKnown RBP10.34□□□□□ -0.75
SMARCA1-203ENST00000371123 POLR3GO15318 223 aaPredicted RBP10.34□□□□□ -0.75
SMARCA1-203ENST00000371123 IQCB1Q15051 598 aa10.34□□□□□ -0.75
SMARCA1-203ENST00000371123 E4F1Q66K89 784 aaPredicted RBP10.34□□□□□ -0.75
SMARCA1-203ENST00000371123 KRBA2Q6ZNG9 492 aa10.34□□□□□ -0.75
SMARCA1-203ENST00000371123 RBM43Q6ZSC3 357 aaKnown RBP10.34□□□□□ -0.75
SMARCA1-203ENST00000371123 C10orf67Q8IYJ2 551 aa10.34□□□□□ -0.75
SMARCA1-203ENST00000371123 USP16Q9Y5T5 823 aa10.34□□□□□ -0.75
SMARCA1-203ENST00000371123 KLHL34Q8N239 644 aa10.34□□□□□ -0.75
SMARCA1-203ENST00000371123 L2HGDHQ9H9P8 463 aa10.34□□□□□ -0.75
SMARCA1-203ENST00000371123 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.34□□□□□ -0.75
SMARCA1-203ENST00000371123 HMMRO75330 724 aa10.33□□□□□ -0.76
SMARCA1-203ENST00000371123 MUM1L1Q5H9M0 696 aa10.33□□□□□ -0.76
SMARCA1-203ENST00000371123 C9orf78Q9NZ63 289 aaPredicted RBP10.33□□□□□ -0.76
SMARCA1-203ENST00000371123 SNX14Q9Y5W7 946 aa10.33□□□□□ -0.76
SMARCA1-203ENST00000371123 NEXMIFQ5QGS0 1516 aa10.33□□□□□ -0.76
SMARCA1-203ENST00000371123 HSPA4P34932 840 aa10.33□□□□□ -0.76
SMARCA1-203ENST00000371123 CEBPAP49715 358 aaPredicted RBP10.33□□□□□ -0.76
SMARCA1-203ENST00000371123 GNAI1P63096 354 aa10.33□□□□□ -0.76
SMARCA1-203ENST00000371123 ADCK5Q3MIX3 580 aa10.33□□□□□ -0.76
SMARCA1-203ENST00000371123 TDRD7Q8NHU6 1098 aaKnown RBP10.33□□□□□ -0.76
SMARCA1-203ENST00000371123 DNAJC25Q9H1X3 360 aa10.33□□□□□ -0.76
SMARCA1-203ENST00000371123 TBC1D8O95759 1140 aa10.33□□□□□ -0.76
SMARCA1-203ENST00000371123 DIP2AQ14689 1571 aa10.33□□□□□ -0.76
SMARCA1-203ENST00000371123 CT47A1Q5JQC4 288 aaPredicted RBP10.33□□□□□ -0.76
SMARCA1-203ENST00000371123 CCAR2Q8N163 923 aaKnown RBP10.33□□□□□ -0.76
SMARCA1-203ENST00000371123 PGBD1Q96JS3 809 aa10.33□□□□□ -0.76
SMARCA1-203ENST00000371123 GEMIN8Q9NWZ8 242 aaKnown RBP10.33□□□□□ -0.76
SMARCA1-203ENST00000371123 H3BQF6 201 aa10.32□□□□□ -0.76
SMARCA1-203ENST00000371123 NR1I2O75469 434 aa10.32□□□□□ -0.76
SMARCA1-203ENST00000371123 ERO1AQ96HE7 468 aa10.32□□□□□ -0.76
SMARCA1-203ENST00000371123 CRYBG1Q9Y4K1 1723 aa10.32□□□□□ -0.76
SMARCA1-203ENST00000371123 TTC21BQ7Z4L5 1316 aa10.32□□□□□ -0.76
SMARCA1-203ENST00000371123 TTC21AQ8NDW8 1320 aa10.32□□□□□ -0.76
SMARCA1-203ENST00000371123 ZFYVE9O95405 1425 aa10.32□□□□□ -0.76
SMARCA1-203ENST00000371123 HSP90AB2PQ58FF8 381 aa10.32□□□□□ -0.76
SMARCA1-203ENST00000371123 CDC37L1Q7L3B6 337 aa10.32□□□□□ -0.76
SMARCA1-203ENST00000371123 RAB11FIP4Q86YS3 637 aa10.32□□□□□ -0.76
SMARCA1-203ENST00000371123 YY1AP1Q9H869 796 aa10.32□□□□□ -0.76
SMARCA1-203ENST00000371123 CLIP2Q9UDT6 1046 aa10.32□□□□□ -0.76
SMARCA1-203ENST00000371123 NWD1Q149M9 1564 aa10.32□□□□□ -0.76
SMARCA1-203ENST00000371123 PNMA6EA0A0J9YXQ4 647 aa10.31□□□□□ -0.76
SMARCA1-203ENST00000371123 ANKRD65E5RJM6 399 aa10.31□□□□□ -0.76
SMARCA1-203ENST00000371123 G2E3Q7L622 706 aa10.31□□□□□ -0.76
SMARCA1-203ENST00000371123 DDX11Q96FC9 970 aa10.31□□□□□ -0.76
SMARCA1-203ENST00000371123 API5Q9BZZ5 524 aaKnown RBP10.31□□□□□ -0.76
SMARCA1-203ENST00000371123 DACT1Q9NYF0 836 aa10.31□□□□□ -0.76
SMARCA1-203ENST00000371123 TFIP11Q9UBB9 837 aaKnown RBP10.31□□□□□ -0.76
SMARCA1-203ENST00000371123 TAF6LQ9Y6J9 622 aa10.31□□□□□ -0.76
SMARCA1-203ENST00000371123 SART3Q15020 963 aaKnown RBP10.31□□□□□ -0.76
SMARCA1-203ENST00000371123 SKIDA1Q1XH10 827 aa10.31□□□□□ -0.76
SMARCA1-203ENST00000371123 EFCC1Q9HA90 598 aa10.31□□□□□ -0.76
SMARCA1-203ENST00000371123 HYPKQ9NX55 129 aa10.31□□□□□ -0.76
SMARCA1-203ENST00000371123 MYL6BP14649 208 aa10.3□□□□□ -0.76
SMARCA1-203ENST00000371123 GJB2P29033 226 aa10.3□□□□□ -0.76
SMARCA1-203ENST00000371123 TOMM22Q9NS69 142 aa10.3□□□□□ -0.76
SMARCA1-203ENST00000371123 KIF20BQ96Q89 1820 aa10.3□□□□□ -0.76
SMARCA1-203ENST00000371123 ATP2B1P20020 1258 aa10.3□□□□□ -0.76
SMARCA1-203ENST00000371123 ERCC4Q92889 916 aaPredicted RBP10.3□□□□□ -0.76
SMARCA1-203ENST00000371123 CCDC192P0DO97 292 aa10.3□□□□□ -0.76
SMARCA1-203ENST00000371123 SRLQ86TD4 932 aa10.3□□□□□ -0.76
SMARCA1-203ENST00000371123 DHX40Q8IX18 779 aaKnown RBP10.3□□□□□ -0.76
SMARCA1-203ENST00000371123 NECAB1Q8N987 351 aa10.3□□□□□ -0.76
SMARCA1-203ENST00000371123 BICD2Q8TD16 824 aa10.3□□□□□ -0.76
SMARCA1-203ENST00000371123 TRIM5Q9C035 493 aa10.3□□□□□ -0.76
SMARCA1-203ENST00000371123 LSG1Q9H089 658 aaKnown RBP10.3□□□□□ -0.76
SMARCA1-203ENST00000371123 C14orf93Q9H972 538 aaKnown RBP10.3□□□□□ -0.76
SMARCA1-203ENST00000371123 KIF24Q5T7B8 1368 aa10.3□□□□□ -0.76
SMARCA1-203ENST00000371123 PLEKHG2Q9H7P9 1386 aa10.3□□□□□ -0.76
SMARCA1-203ENST00000371123 SLU7O95391 586 aaKnown RBP10.29□□□□□ -0.76
SMARCA1-203ENST00000371123 TPM3P06753 285 aa10.29□□□□□ -0.76
SMARCA1-203ENST00000371123 ANAPC15P60006 121 aa10.29□□□□□ -0.76
SMARCA1-203ENST00000371123 GUCY1B3Q02153 619 aa10.29□□□□□ -0.76
SMARCA1-203ENST00000371123 CCDC83Q8IWF9 413 aa10.29□□□□□ -0.76
SMARCA1-203ENST00000371123 SKILP12757 684 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms