RNA–Protein interactions for RNA: ENST00000371118.1

ATG4C-202, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-202ENST00000371118 RPS6KA4O75676 772 aa8.59□□□□□ -1.03
ATG4C-202ENST00000371118 FMR1Q06787 632 aaKnown RBP eCLIP8.59□□□□□ -1.03
ATG4C-202ENST00000371118 HDGFL2Q7Z4V5 671 aaPredicted RBP8.59□□□□□ -1.03
ATG4C-202ENST00000371118 NBPF15Q8N660 670 aa8.59□□□□□ -1.03
ATG4C-202ENST00000371118 OXER1Q8TDS5 423 aa8.59□□□□□ -1.03
ATG4C-202ENST00000371118 ZNF622Q969S3 477 aaKnown RBP eCLIP8.59□□□□□ -1.031e-6■■□□□ 14.2
ATG4C-202ENST00000371118 ATG3Q9NT62 314 aa8.59□□□□□ -1.03
ATG4C-202ENST00000371118 POLRMTO00411 1230 aaKnown RBP8.58□□□□□ -1.04
ATG4C-202ENST00000371118 RBM26Q5T8P6 1007 aaKnown RBP8.58□□□□□ -1.04
ATG4C-202ENST00000371118 PTCD2Q8WV60 388 aaKnown RBP8.58□□□□□ -1.04
ATG4C-202ENST00000371118 HACL1Q9UJ83 578 aa8.58□□□□□ -1.04
ATG4C-202ENST00000371118 MAP2P11137 1827 aaKnown RBP8.58□□□□□ -1.04
ATG4C-202ENST00000371118 SBNO2Q9Y2G9 1366 aa8.58□□□□□ -1.04
ATG4C-202ENST00000371118 CD163L1Q9NR16 1453 aa8.57□□□□□ -1.04
ATG4C-202ENST00000371118 CA12O43570 354 aa8.57□□□□□ -1.04
ATG4C-202ENST00000371118 ZPR1O75312 459 aa8.57□□□□□ -1.04
ATG4C-202ENST00000371118 EPHX2P34913 555 aa8.57□□□□□ -1.04
ATG4C-202ENST00000371118 RRS1Q15050 365 aaKnown RBP8.57□□□□□ -1.04
ATG4C-202ENST00000371118 RC3H1Q5TC82 1133 aaKnown RBP8.57□□□□□ -1.04
ATG4C-202ENST00000371118 COG3Q96JB2 828 aa8.57□□□□□ -1.04
ATG4C-202ENST00000371118 TAOK3Q9H2K8 898 aa8.57□□□□□ -1.04
ATG4C-202ENST00000371118 DDX21Q9NR30 783 aaKnown RBP eCLIP8.57□□□□□ -1.04
ATG4C-202ENST00000371118 MAP2K2P36507 400 aa8.56□□□□□ -1.04
ATG4C-202ENST00000371118 CIAPIN1Q6FI81 312 aa8.56□□□□□ -1.04
ATG4C-202ENST00000371118 SLC4A9Q96Q91 983 aa8.56□□□□□ -1.04
ATG4C-202ENST00000371118 SLC12A5Q9H2X9 1139 aa8.56□□□□□ -1.04
ATG4C-202ENST00000371118 RNF123Q5XPI4 1314 aa8.55□□□□□ -1.04
ATG4C-202ENST00000371118 USP42Q9H9J4 1324 aaKnown RBP8.55□□□□□ -1.04
ATG4C-202ENST00000371118 SMG6Q86US8 1419 aaKnown RBP8.55□□□□□ -1.04
ATG4C-202ENST00000371118 MON2Q7Z3U7 1717 aa8.55□□□□□ -1.04
ATG4C-202ENST00000371118 TRAF5O00463 557 aa8.55□□□□□ -1.04
ATG4C-202ENST00000371118 PTCD1O75127 700 aaKnown RBP8.55□□□□□ -1.04
ATG4C-202ENST00000371118 TM4SF1P30408 202 aa8.55□□□□□ -1.04
ATG4C-202ENST00000371118 USPL1Q5W0Q7 1092 aa8.55□□□□□ -1.04
ATG4C-202ENST00000371118 PNMA8AQ86V59 439 aaPredicted RBP8.55□□□□□ -1.04
ATG4C-202ENST00000371118 SLC17A8Q8NDX2 589 aa8.55□□□□□ -1.04
ATG4C-202ENST00000371118 SPG7Q9UQ90 795 aa8.55□□□□□ -1.04
ATG4C-202ENST00000371118 CNTNAP4Q9C0A0 1308 aa8.54□□□□□ -1.04
ATG4C-202ENST00000371118 LTBP1Q14766 1721 aa8.54□□□□□ -1.04
ATG4C-202ENST00000371118 EVI5O60447 810 aa8.54□□□□□ -1.04
ATG4C-202ENST00000371118 ZMYND10O75800 440 aa8.54□□□□□ -1.04
ATG4C-202ENST00000371118 SERPINB2P05120 415 aa8.54□□□□□ -1.04
ATG4C-202ENST00000371118 CRKLP46109 303 aaKnown RBP8.54□□□□□ -1.04
ATG4C-202ENST00000371118 BICDL1Q6ZP65 573 aa8.54□□□□□ -1.04
ATG4C-202ENST00000371118 GPIHBP1Q8IV16 184 aa8.54□□□□□ -1.04
ATG4C-202ENST00000371118 CCDC24Q8N4L8 307 aa8.54□□□□□ -1.04
ATG4C-202ENST00000371118 NFIXQ14938 502 aa8.53□□□□□ -1.04
ATG4C-202ENST00000371118 HSP90AB2PQ58FF8 381 aa8.53□□□□□ -1.04
ATG4C-202ENST00000371118 GPR153Q6NV75 609 aa8.53□□□□□ -1.04
ATG4C-202ENST00000371118 SLC24A3Q9HC58 644 aa8.53□□□□□ -1.04
ATG4C-202ENST00000371118 TERF2IPQ9NYB0 399 aa8.53□□□□□ -1.04
ATG4C-202ENST00000371118 PCDHGA4Q9Y5G9 962 aa8.53□□□□□ -1.04
ATG4C-202ENST00000371118 ZNF541Q9H0D2 1346 aa8.53□□□□□ -1.04
ATG4C-202ENST00000371118 SCN4AP35499 1836 aa8.52□□□□□ -1.04
ATG4C-202ENST00000371118 GRXCR2A6NFK2 248 aa8.52□□□□□ -1.05
ATG4C-202ENST00000371118 FXR1P51114 621 aaKnown RBP eCLIP8.52□□□□□ -1.05
ATG4C-202ENST00000371118 BRPF1P55201 1214 aaPredicted RBP8.52□□□□□ -1.05
ATG4C-202ENST00000371118 CST9Q5W186 159 aa8.52□□□□□ -1.05
ATG4C-202ENST00000371118 ZNF408Q9H9D4 720 aa8.52□□□□□ -1.05
ATG4C-202ENST00000371118 TLL2Q9Y6L7 1015 aa8.52□□□□□ -1.05
ATG4C-202ENST00000371118 EDC4Q6P2E9 1401 aaKnown RBP8.52□□□□□ -1.05
ATG4C-202ENST00000371118 DICER1Q9UPY3 1922 aaKnown RBP8.52□□□□□ -1.05
ATG4C-202ENST00000371118 GJA3Q9Y6H8 435 aa8.51□□□□□ -1.05
ATG4C-202ENST00000371118 KDRP35968 1356 aa8.5□□□□□ -1.05
ATG4C-202ENST00000371118 CARMIL3Q8ND23 1372 aa8.5□□□□□ -1.05
ATG4C-202ENST00000371118 NPHP1O15259 732 aa8.5□□□□□ -1.05
ATG4C-202ENST00000371118 PPM1GO15355 546 aaPredicted RBP8.5□□□□□ -1.05
ATG4C-202ENST00000371118 CELF2O95319 508 aaKnown RBP8.5□□□□□ -1.05
ATG4C-202ENST00000371118 IFNL2Q8IZJ0 200 aa8.5□□□□□ -1.05
ATG4C-202ENST00000371118 ZIC5Q96T25 663 aa8.5□□□□□ -1.05
ATG4C-202ENST00000371118 ZNF277Q9NRM2 450 aaPredicted RBP8.5□□□□□ -1.05
ATG4C-202ENST00000371118 THSD7BQ9C0I4 1608 aa8.5□□□□□ -1.05
ATG4C-202ENST00000371118 MYH14Q7Z406 1995 aaKnown RBP8.5□□□□□ -1.05
ATG4C-202ENST00000371118 PHKG2P15735 406 aa8.49□□□□□ -1.05
ATG4C-202ENST00000371118 LMOD1P29536 600 aaPredicted RBP8.49□□□□□ -1.05
ATG4C-202ENST00000371118 PDE6BP35913 854 aa8.49□□□□□ -1.05
ATG4C-202ENST00000371118 CABP4P57796 275 aa8.49□□□□□ -1.05
ATG4C-202ENST00000371118 SAPCD2Q86UD0 394 aa8.49□□□□□ -1.05
ATG4C-202ENST00000371118 HPS5Q9UPZ3 1129 aa8.49□□□□□ -1.05
ATG4C-202ENST00000371118 LTBP3Q9NS15 1303 aa8.49□□□□□ -1.05
ATG4C-202ENST00000371118 A0A1W2PP64 1363 aa8.48□□□□□ -1.05
ATG4C-202ENST00000371118 AFDNP55196 1824 aaKnown RBP8.48□□□□□ -1.05
ATG4C-202ENST00000371118 TRPA1O75762 1119 aa8.48□□□□□ -1.05
ATG4C-202ENST00000371118 PRPF40BQ6NWY9 871 aaKnown RBP8.48□□□□□ -1.05
ATG4C-202ENST00000371118 INTS5Q6P9B9 1019 aaKnown RBP8.48□□□□□ -1.05
ATG4C-202ENST00000371118 SYNE4Q8N205 404 aa8.48□□□□□ -1.05
ATG4C-202ENST00000371118 DDX12PQ92771 950 aa8.48□□□□□ -1.05
ATG4C-202ENST00000371118 FER1L6Q2WGJ9 1857 aa8.48□□□□□ -1.05
ATG4C-202ENST00000371118 DLEC1Q9Y238 1755 aa8.48□□□□□ -1.05
ATG4C-202ENST00000371118 RTL1A6NKG5 1358 aa8.48□□□□□ -1.05
ATG4C-202ENST00000371118 COL5A3P25940 1745 aaPredicted RBP8.47□□□□□ -1.05
ATG4C-202ENST00000371118 PBX2P40425 430 aa8.47□□□□□ -1.05
ATG4C-202ENST00000371118 ARSIQ5FYB1 569 aa8.47□□□□□ -1.05
ATG4C-202ENST00000371118 CTU1Q7Z7A3 348 aaKnown RBP8.47□□□□□ -1.05
ATG4C-202ENST00000371118 CNKSR1Q969H4 720 aa8.47□□□□□ -1.05
ATG4C-202ENST00000371118 GGNBP2Q9H3C7 697 aa8.47□□□□□ -1.05
ATG4C-202ENST00000371118 RAB3GAP2Q9H2M9 1393 aa8.47□□□□□ -1.05
ATG4C-202ENST00000371118 ADAMTSL1Q8N6G6 1762 aa8.46□□□□□ -1.05
ATG4C-202ENST00000371118 ERVV-2B6SEH9 535 aa8.46□□□□□ -1.06
ATG4C-202ENST00000371118 OSBPP22059 807 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms