RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 SSH1Q8WYL5 1049 aa18.93■□□□□ 0.62
COL9A1-204ENST00000370496 UTP14AQ9BVJ6 771 aaKnown RBP18.93■□□□□ 0.62
COL9A1-204ENST00000370496 WWC3Q9ULE0 1092 aa18.93■□□□□ 0.62
COL9A1-204ENST00000370496 RNF123Q5XPI4 1314 aa18.93■□□□□ 0.62
COL9A1-204ENST00000370496 A0A0G2JLW4 131 aa18.92■□□□□ 0.62
COL9A1-204ENST00000370496 DPEP1P16444 411 aa18.92■□□□□ 0.62
COL9A1-204ENST00000370496 ALDH1L2Q3SY69 923 aa18.92■□□□□ 0.62
COL9A1-204ENST00000370496 YTHDC1Q96MU7 727 aaKnown RBP18.92■□□□□ 0.62
COL9A1-204ENST00000370496 ISCA1Q9BUE6 129 aa18.92■□□□□ 0.62
COL9A1-204ENST00000370496 METTL22Q9BUU2 404 aaPredicted RBP18.92■□□□□ 0.62
COL9A1-204ENST00000370496 BRIP1Q9BX63 1249 aa18.92■□□□□ 0.62
COL9A1-204ENST00000370496 DDX60Q8IY21 1712 aaKnown RBP18.91■□□□□ 0.62
COL9A1-204ENST00000370496 RIC1Q4ADV7 1423 aa18.91■□□□□ 0.62
COL9A1-204ENST00000370496 CHRNA5P30532 468 aa18.91■□□□□ 0.62
COL9A1-204ENST00000370496 ERFEQ4G0M1 354 aa18.91■□□□□ 0.62
COL9A1-204ENST00000370496 C2CD5Q86YS7 1000 aa18.91■□□□□ 0.62
COL9A1-204ENST00000370496 MRPL50Q8N5N7 158 aaKnown RBP18.91■□□□□ 0.62
COL9A1-204ENST00000370496 TRMT112Q9UI30 125 aaKnown RBP18.91■□□□□ 0.62
COL9A1-204ENST00000370496 DNAAF4Q8WXU2 420 aa18.9■□□□□ 0.62
COL9A1-204ENST00000370496 SH3TC1Q8TE82 1336 aa18.89■□□□□ 0.61
COL9A1-204ENST00000370496 H0YIN7 160 aa18.89■□□□□ 0.61
COL9A1-204ENST00000370496 GPR162Q16538 588 aa18.89■□□□□ 0.61
COL9A1-204ENST00000370496 PDZRN3Q9UPQ7 1066 aa18.89■□□□□ 0.61
COL9A1-204ENST00000370496 ARFGEF1Q9Y6D6 1849 aa18.88■□□□□ 0.61
COL9A1-204ENST00000370496 PTPRCP08575 1304 aa18.88■□□□□ 0.61
COL9A1-204ENST00000370496 GOLGB1Q14789 3259 aaKnown RBP18.88■□□□□ 0.61
COL9A1-204ENST00000370496 CWC25Q9NXE8 425 aaPredicted RBP18.88■□□□□ 0.61
COL9A1-204ENST00000370496 F6X3S4 739 aa18.87■□□□□ 0.61
COL9A1-204ENST00000370496 TRIM28Q13263 835 aaKnown RBP18.87■□□□□ 0.61
COL9A1-204ENST00000370496 CCDC191Q8NCU4 936 aa18.87■□□□□ 0.61
COL9A1-204ENST00000370496 PIM2Q9P1W9 311 aa18.87■□□□□ 0.61
COL9A1-204ENST00000370496 KIF16BQ96L93 1317 aa18.86■□□□□ 0.61
COL9A1-204ENST00000370496 RARSP54136 660 aaKnown RBP18.86■□□□□ 0.61
COL9A1-204ENST00000370496 CWF19L2Q2TBE0 894 aaKnown RBP18.86■□□□□ 0.61
COL9A1-204ENST00000370496 IGKV5-2P06315 115 aa18.85■□□□□ 0.61
COL9A1-204ENST00000370496 RTL5Q5HYW3 569 aaPredicted RBP18.85■□□□□ 0.61
COL9A1-204ENST00000370496 SLC4A10Q6U841 1118 aa18.85■□□□□ 0.61
COL9A1-204ENST00000370496 ZNF622Q969S3 477 aaKnown RBP eCLIP18.85■□□□□ 0.61
COL9A1-204ENST00000370496 FAM89AQ96GI7 184 aa18.85■□□□□ 0.61
COL9A1-204ENST00000370496 BCS1LQ9Y276 419 aa18.85■□□□□ 0.61
COL9A1-204ENST00000370496 NEURL1BA8MQ27 555 aa18.84■□□□□ 0.61
COL9A1-204ENST00000370496 YBX3P16989 372 aaKnown RBP eCLIP18.84■□□□□ 0.61
COL9A1-204ENST00000370496 KCNA3P22001 575 aa18.84■□□□□ 0.61
COL9A1-204ENST00000370496 DALRD3Q5D0E6 543 aaKnown RBP18.84■□□□□ 0.61
COL9A1-204ENST00000370496 LINS1Q8NG48 757 aa18.84■□□□□ 0.61
COL9A1-204ENST00000370496 MYH3P11055 1940 aa18.84■□□□□ 0.61
COL9A1-204ENST00000370496 SRGNP10124 158 aa18.83■□□□□ 0.61
COL9A1-204ENST00000370496 HCLS1P14317 486 aaPredicted RBP18.83■□□□□ 0.61
COL9A1-204ENST00000370496 ZBTB38Q8NAP3 1195 aaPredicted RBP18.83■□□□□ 0.61
COL9A1-204ENST00000370496 RPGRQ92834 1020 aaKnown RBP18.83■□□□□ 0.61
COL9A1-204ENST00000370496 MASTLQ96GX5 879 aa18.83■□□□□ 0.61
COL9A1-204ENST00000370496 PCCAP05165 728 aaPredicted RBP18.82■□□□□ 0.6
COL9A1-204ENST00000370496 NPR1P16066 1061 aa18.82■□□□□ 0.6
COL9A1-204ENST00000370496 STYK1Q6J9G0 422 aa18.82■□□□□ 0.6
COL9A1-204ENST00000370496 SYNE4Q8N205 404 aa18.82■□□□□ 0.6
COL9A1-204ENST00000370496 TTLL6Q8N841 843 aa18.82■□□□□ 0.6
COL9A1-204ENST00000370496 NLRP3Q96P20 1036 aa18.82■□□□□ 0.6
COL9A1-204ENST00000370496 IRS4O14654 1257 aaPredicted RBP18.81■□□□□ 0.6
COL9A1-204ENST00000370496 HSP90B1P14625 803 aaKnown RBP18.81■□□□□ 0.6
COL9A1-204ENST00000370496 SLX4Q8IY92 1834 aa18.81■□□□□ 0.6
COL9A1-204ENST00000370496 KLRG2A4D1S0 409 aaPredicted RBP18.81■□□□□ 0.6
COL9A1-204ENST00000370496 BRPF1P55201 1214 aaPredicted RBP18.81■□□□□ 0.6
COL9A1-204ENST00000370496 CRY2Q49AN0 593 aa18.81■□□□□ 0.6
COL9A1-204ENST00000370496 SLC10A5Q5PT55 438 aa18.81■□□□□ 0.6
COL9A1-204ENST00000370496 BEND3Q5T5X7 828 aa18.81■□□□□ 0.6
COL9A1-204ENST00000370496 C3orf67Q6ZVT6 689 aa18.81■□□□□ 0.6
COL9A1-204ENST00000370496 CNKSR1Q969H4 720 aa18.81■□□□□ 0.6
COL9A1-204ENST00000370496 SRCIN1Q9C0H9 1055 aa18.81■□□□□ 0.6
COL9A1-204ENST00000370496 NOB1Q9ULX3 412 aaKnown RBP18.81■□□□□ 0.6
COL9A1-204ENST00000370496 GRIN3BO60391 1043 aa18.8■□□□□ 0.6
COL9A1-204ENST00000370496 GCKRQ14397 625 aa18.8■□□□□ 0.6
COL9A1-204ENST00000370496 UBE3BQ7Z3V4 1068 aa18.8■□□□□ 0.6
COL9A1-204ENST00000370496 JARID2Q92833 1246 aaPredicted RBP18.8■□□□□ 0.6
COL9A1-204ENST00000370496 FRAT1Q92837 279 aaPredicted RBP18.8■□□□□ 0.6
COL9A1-204ENST00000370496 API5Q9BZZ5 524 aaKnown RBP18.8■□□□□ 0.6
COL9A1-204ENST00000370496 UTRNP46939 3433 aa18.8■□□□□ 0.6
COL9A1-204ENST00000370496 CDHR2Q9BYE9 1310 aa18.79■□□□□ 0.6
COL9A1-204ENST00000370496 BCAR3O75815 825 aa18.79■□□□□ 0.6
COL9A1-204ENST00000370496 PRPF40BQ6NWY9 871 aaKnown RBP18.79■□□□□ 0.6
COL9A1-204ENST00000370496 RBM17Q96I25 401 aaKnown RBP18.79■□□□□ 0.6
COL9A1-204ENST00000370496 ALDH1L1O75891 902 aa18.78■□□□□ 0.6
COL9A1-204ENST00000370496 CHD4Q14839 1912 aa18.78■□□□□ 0.6
COL9A1-204ENST00000370496 IPO8O15397 1037 aaKnown RBP18.77■□□□□ 0.6
COL9A1-204ENST00000370496 ALDH1B1P30837 517 aa18.77■□□□□ 0.6
COL9A1-204ENST00000370496 PDE8AO60658 829 aa18.76■□□□□ 0.59
COL9A1-204ENST00000370496 DDX46Q7L014 1031 aaKnown RBP18.76■□□□□ 0.59
COL9A1-204ENST00000370496 C9orf78Q9NZ63 289 aaPredicted RBP18.76■□□□□ 0.59
COL9A1-204ENST00000370496 ZNF219Q9P2Y4 722 aaPredicted RBP18.76■□□□□ 0.59
COL9A1-204ENST00000370496 GRM8O00222 908 aa18.75■□□□□ 0.59
COL9A1-204ENST00000370496 HOXA10P31260 410 aaPredicted RBP18.75■□□□□ 0.59
COL9A1-204ENST00000370496 ARHGAP45Q92619 1136 aa18.75■□□□□ 0.59
COL9A1-204ENST00000370496 SPEF2Q9C093 1822 aa18.75■□□□□ 0.59
COL9A1-204ENST00000370496 ABCC4O15439 1325 aa18.75■□□□□ 0.59
COL9A1-204ENST00000370496 TAF1P21675 1872 aa18.75■□□□□ 0.59
COL9A1-204ENST00000370496 H7C1W4 665 aa18.74■□□□□ 0.59
COL9A1-204ENST00000370496 C21orf2O43822 256 aa18.74■□□□□ 0.59
COL9A1-204ENST00000370496 CCT4P50991 539 aaKnown RBP18.74■□□□□ 0.59
COL9A1-204ENST00000370496 CTSWP56202 376 aa18.74■□□□□ 0.59
COL9A1-204ENST00000370496 CCDC152Q4G0S7 254 aa18.74■□□□□ 0.59
COL9A1-204ENST00000370496 ATF7IPQ6VMQ6 1270 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms