RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 ADCY9O60503 1353 aa17.49■□□□□ 0.39
SSR4-202ENST00000370085 H0YIN7 160 aa17.48■□□□□ 0.39
SSR4-202ENST00000370085 IPO8O15397 1037 aaKnown RBP17.48■□□□□ 0.39
SSR4-202ENST00000370085 BRPF1P55201 1214 aaPredicted RBP17.48■□□□□ 0.39
SSR4-202ENST00000370085 SH3TC1Q8TE82 1336 aa17.47■□□□□ 0.39
SSR4-202ENST00000370085 NTSR2O95665 410 aa17.47■□□□□ 0.39
SSR4-202ENST00000370085 LINS1Q8NG48 757 aa17.47■□□□□ 0.39
SSR4-202ENST00000370085 NUTM1Q86Y26 1132 aa17.46■□□□□ 0.39
SSR4-202ENST00000370085 NLGN2Q8NFZ4 835 aa17.46■□□□□ 0.39
SSR4-202ENST00000370085 API5Q9BZZ5 524 aaKnown RBP17.46■□□□□ 0.39
SSR4-202ENST00000370085 RIC1Q4ADV7 1423 aa17.46■□□□□ 0.39
SSR4-202ENST00000370085 PXDNLA1KZ92 1463 aa17.45■□□□□ 0.38
SSR4-202ENST00000370085 ERFEQ4G0M1 354 aa17.45■□□□□ 0.38
SSR4-202ENST00000370085 SLC4A10Q6U841 1118 aa17.45■□□□□ 0.38
SSR4-202ENST00000370085 C2CD5Q86YS7 1000 aa17.45■□□□□ 0.38
SSR4-202ENST00000370085 ZBTB38Q8NAP3 1195 aaPredicted RBP17.45■□□□□ 0.38
SSR4-202ENST00000370085 NLRP3Q96P20 1036 aa17.45■□□□□ 0.38
SSR4-202ENST00000370085 PIM2Q9P1W9 311 aa17.45■□□□□ 0.38
SSR4-202ENST00000370085 N4BP2Q86UW6 1770 aaPredicted RBP17.44■□□□□ 0.38
SSR4-202ENST00000370085 A0A0G2JLW4 131 aa17.44■□□□□ 0.38
SSR4-202ENST00000370085 F6X3S4 739 aa17.44■□□□□ 0.38
SSR4-202ENST00000370085 DPEP1P16444 411 aa17.44■□□□□ 0.38
SSR4-202ENST00000370085 PELP1Q8IZL8 1130 aaKnown RBP17.44■□□□□ 0.38
SSR4-202ENST00000370085 CCDC24Q8N4L8 307 aa17.44■□□□□ 0.38
SSR4-202ENST00000370085 ARHGAP45Q92619 1136 aa17.44■□□□□ 0.38
SSR4-202ENST00000370085 SRCIN1Q9C0H9 1055 aa17.44■□□□□ 0.38
SSR4-202ENST00000370085 NOB1Q9ULX3 412 aaKnown RBP17.44■□□□□ 0.38
SSR4-202ENST00000370085 NEURL1BA8MQ27 555 aa17.43■□□□□ 0.38
SSR4-202ENST00000370085 PCCAP05165 728 aaPredicted RBP17.43■□□□□ 0.38
SSR4-202ENST00000370085 GPR162Q16538 588 aa17.43■□□□□ 0.38
SSR4-202ENST00000370085 SLC10A5Q5PT55 438 aa17.43■□□□□ 0.38
SSR4-202ENST00000370085 RPGRQ92834 1020 aaKnown RBP17.43■□□□□ 0.38
SSR4-202ENST00000370085 ANKRD31Q8N7Z5 1873 aa17.43■□□□□ 0.38
SSR4-202ENST00000370085 ALDH1L1O75891 902 aa17.42■□□□□ 0.38
SSR4-202ENST00000370085 IGKV5-2P06315 115 aa17.42■□□□□ 0.38
SSR4-202ENST00000370085 NPR1P16066 1061 aa17.42■□□□□ 0.38
SSR4-202ENST00000370085 CHRNA5P30532 468 aa17.42■□□□□ 0.38
SSR4-202ENST00000370085 CWF19L2Q2TBE0 894 aaKnown RBP17.42■□□□□ 0.38
SSR4-202ENST00000370085 FRAT1Q92837 279 aaPredicted RBP17.42■□□□□ 0.38
SSR4-202ENST00000370085 CNKSR1Q969H4 720 aa17.42■□□□□ 0.38
SSR4-202ENST00000370085 ZNF622Q969S3 477 aaKnown RBP eCLIP17.42■□□□□ 0.38
SSR4-202ENST00000370085 FAM89AQ96GI7 184 aa17.42■□□□□ 0.38
SSR4-202ENST00000370085 MASTLQ96GX5 879 aa17.42■□□□□ 0.38
SSR4-202ENST00000370085 KLRG2A4D1S0 409 aaPredicted RBP17.41■□□□□ 0.38
SSR4-202ENST00000370085 IRS4O14654 1257 aaPredicted RBP17.41■□□□□ 0.38
SSR4-202ENST00000370085 GRIN3BO60391 1043 aa17.41■□□□□ 0.38
SSR4-202ENST00000370085 ALDH1B1P30837 517 aa17.41■□□□□ 0.38
SSR4-202ENST00000370085 GCKRQ14397 625 aa17.41■□□□□ 0.38
SSR4-202ENST00000370085 DALRD3Q5D0E6 543 aaKnown RBP17.41■□□□□ 0.38
SSR4-202ENST00000370085 BEND3Q5T5X7 828 aa17.41■□□□□ 0.38
SSR4-202ENST00000370085 STYK1Q6J9G0 422 aa17.41■□□□□ 0.38
SSR4-202ENST00000370085 TTLL6Q8N841 843 aa17.41■□□□□ 0.38
SSR4-202ENST00000370085 C9orf78Q9NZ63 289 aaPredicted RBP17.41■□□□□ 0.38
SSR4-202ENST00000370085 ABCC12Q96J65 1359 aa17.4■□□□□ 0.38
SSR4-202ENST00000370085 DLEC1Q9Y238 1755 aa17.4■□□□□ 0.38
SSR4-202ENST00000370085 BCAR3O75815 825 aa17.4■□□□□ 0.38
SSR4-202ENST00000370085 SRGNP10124 158 aa17.4■□□□□ 0.38
SSR4-202ENST00000370085 CCT4P50991 539 aaKnown RBP17.4■□□□□ 0.38
SSR4-202ENST00000370085 RTL5Q5HYW3 569 aaPredicted RBP17.4■□□□□ 0.38
SSR4-202ENST00000370085 RBM17Q96I25 401 aaKnown RBP17.4■□□□□ 0.38
SSR4-202ENST00000370085 BCS1LQ9Y276 419 aa17.4■□□□□ 0.38
SSR4-202ENST00000370085 KIAA1551Q9HCM1 1747 aa17.39■□□□□ 0.37
SSR4-202ENST00000370085 HCLS1P14317 486 aaPredicted RBP17.39■□□□□ 0.37
SSR4-202ENST00000370085 ZKSCAN2Q63HK3 967 aa17.39■□□□□ 0.37
SSR4-202ENST00000370085 ATF7IPQ6VMQ6 1270 aa17.39■□□□□ 0.37
SSR4-202ENST00000370085 RCAN3Q9UKA8 241 aa17.39■□□□□ 0.37
SSR4-202ENST00000370085 CDHR2Q9BYE9 1310 aa17.39■□□□□ 0.37
SSR4-202ENST00000370085 BRCA1P38398 1863 aaKnown RBP17.38■□□□□ 0.37
SSR4-202ENST00000370085 PDE8AO60658 829 aa17.38■□□□□ 0.37
SSR4-202ENST00000370085 MS4A1P11836 297 aa17.38■□□□□ 0.37
SSR4-202ENST00000370085 KCNA3P22001 575 aa17.38■□□□□ 0.37
SSR4-202ENST00000370085 CRY2Q49AN0 593 aa17.38■□□□□ 0.37
SSR4-202ENST00000370085 UBE3BQ7Z3V4 1068 aa17.38■□□□□ 0.37
SSR4-202ENST00000370085 TMX4Q9H1E5 349 aaPredicted RBP17.38■□□□□ 0.37
SSR4-202ENST00000370085 HDAC5Q9UQL6 1122 aa17.38■□□□□ 0.37
SSR4-202ENST00000370085 LAMB2P55268 1798 aa17.38■□□□□ 0.37
SSR4-202ENST00000370085 H7C1W4 665 aa17.37■□□□□ 0.37
SSR4-202ENST00000370085 GRM8O00222 908 aa17.37■□□□□ 0.37
SSR4-202ENST00000370085 DDX46Q7L014 1031 aaKnown RBP17.37■□□□□ 0.37
SSR4-202ENST00000370085 FTSJ3Q8IY81 847 aaKnown RBP17.37■□□□□ 0.37
SSR4-202ENST00000370085 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.37■□□□□ 0.37
SSR4-202ENST00000370085 COL11A2P13942 1736 aaPredicted RBP17.36■□□□□ 0.37
SSR4-202ENST00000370085 CCDC152Q4G0S7 254 aa17.36■□□□□ 0.37
SSR4-202ENST00000370085 SOGA3Q5TF21 947 aa17.36■□□□□ 0.37
SSR4-202ENST00000370085 SYNE4Q8N205 404 aa17.36■□□□□ 0.37
SSR4-202ENST00000370085 WWC3Q9ULE0 1092 aa17.36■□□□□ 0.37
SSR4-202ENST00000370085 TNRC6CQ9HCJ0 1690 aaKnown RBP17.36■□□□□ 0.37
SSR4-202ENST00000370085 DDX60Q8IY21 1712 aaKnown RBP17.35■□□□□ 0.37
SSR4-202ENST00000370085 HOXA10P31260 410 aaPredicted RBP17.35■□□□□ 0.37
SSR4-202ENST00000370085 CRAMP1Q96RY5 1269 aa17.35■□□□□ 0.37
SSR4-202ENST00000370085 ARFGEF1Q9Y6D6 1849 aa17.35■□□□□ 0.37
SSR4-202ENST00000370085 MYH3P11055 1940 aa17.35■□□□□ 0.37
SSR4-202ENST00000370085 GOLGB1Q14789 3259 aaKnown RBP17.34■□□□□ 0.37
SSR4-202ENST00000370085 TRIM27P14373 513 aa17.34■□□□□ 0.37
SSR4-202ENST00000370085 SF3B3Q15393 1217 aaKnown RBP17.34■□□□□ 0.37
SSR4-202ENST00000370085 PRPF40BQ6NWY9 871 aaKnown RBP17.34■□□□□ 0.37
SSR4-202ENST00000370085 CACNA1SQ13698 1873 aa17.33■□□□□ 0.37
SSR4-202ENST00000370085 ABCC4O15439 1325 aa17.33■□□□□ 0.36
SSR4-202ENST00000370085 CTSWP56202 376 aa17.33■□□□□ 0.36
SSR4-202ENST00000370085 TMC4Q7Z404 712 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms