RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 DACT1Q9NYF0 836 aa12.98□□□□□ -0.33
LRIF1-201ENST00000369763 NRKQ7Z2Y5 1582 aa12.98□□□□□ -0.33
LRIF1-201ENST00000369763 ATP5J2-PTCD1G3V325 749 aa12.98□□□□□ -0.33
LRIF1-201ENST00000369763 PTCD1O75127 700 aaKnown RBP12.98□□□□□ -0.33
LRIF1-201ENST00000369763 ORAI2Q96SN7 254 aa12.98□□□□□ -0.33
LRIF1-201ENST00000369763 SLC27A2O14975 620 aa12.98□□□□□ -0.33
LRIF1-201ENST00000369763 BLOC1S2Q6QNY1 142 aa12.98□□□□□ -0.33
LRIF1-201ENST00000369763 BICD2Q8TD16 824 aa12.98□□□□□ -0.33
LRIF1-201ENST00000369763 IP6K1Q92551 441 aa12.97□□□□□ -0.33
LRIF1-201ENST00000369763 TBX22Q9Y458 520 aa12.97□□□□□ -0.33
LRIF1-201ENST00000369763 AOX1Q06278 1338 aa12.97□□□□□ -0.33
LRIF1-201ENST00000369763 GRM8O00222 908 aa12.97□□□□□ -0.33
LRIF1-201ENST00000369763 GIGYF1O75420 1035 aaPredicted RBP12.97□□□□□ -0.33
LRIF1-201ENST00000369763 PTGS1P23219 599 aa12.97□□□□□ -0.33
LRIF1-201ENST00000369763 VPS53Q5VIR6 699 aa12.97□□□□□ -0.33
LRIF1-201ENST00000369763 ERCC4Q92889 916 aaPredicted RBP12.97□□□□□ -0.33
LRIF1-201ENST00000369763 EVI5LQ96CN4 794 aa12.97□□□□□ -0.33
LRIF1-201ENST00000369763 MYD88Q99836 296 aa12.97□□□□□ -0.33
LRIF1-201ENST00000369763 ZSWIM6Q9HCJ5 1215 aa12.97□□□□□ -0.33
LRIF1-201ENST00000369763 AKAP12Q02952 1782 aa12.97□□□□□ -0.33
LRIF1-201ENST00000369763 MCM5P33992 734 aa12.97□□□□□ -0.33
LRIF1-201ENST00000369763 LRMPQ12912 555 aa12.97□□□□□ -0.33
LRIF1-201ENST00000369763 PLEKHO1Q53GL0 409 aaPredicted RBP12.97□□□□□ -0.33
LRIF1-201ENST00000369763 EPHA10Q5JZY3 1008 aa12.97□□□□□ -0.33
LRIF1-201ENST00000369763 KSR2Q6VAB6 950 aa12.97□□□□□ -0.33
LRIF1-201ENST00000369763 FAM184AQ8NB25 1140 aa12.97□□□□□ -0.33
LRIF1-201ENST00000369763 KAZALD1Q96I82 304 aa12.97□□□□□ -0.33
LRIF1-201ENST00000369763 GUCY1B3Q02153 619 aa12.96□□□□□ -0.33
LRIF1-201ENST00000369763 NECTIN1Q15223 517 aa12.96□□□□□ -0.33
LRIF1-201ENST00000369763 NRBP1Q9UHY1 535 aa12.96□□□□□ -0.33
LRIF1-201ENST00000369763 RNMTO43148 476 aaKnown RBP12.96□□□□□ -0.33
LRIF1-201ENST00000369763 KRT85P78386 507 aa12.96□□□□□ -0.33
LRIF1-201ENST00000369763 DDX46Q7L014 1031 aaKnown RBP12.96□□□□□ -0.33
LRIF1-201ENST00000369763 THEMISQ8N1K5 641 aaPredicted RBP12.96□□□□□ -0.33
LRIF1-201ENST00000369763 PIBF1Q8WXW3 757 aa12.96□□□□□ -0.33
LRIF1-201ENST00000369763 SPATA32Q96LK8 384 aa12.96□□□□□ -0.33
LRIF1-201ENST00000369763 FTOQ9C0B1 505 aaKnown RBP eCLIP12.96□□□□□ -0.33
LRIF1-201ENST00000369763 AXIN2Q9Y2T1 843 aa12.96□□□□□ -0.33
LRIF1-201ENST00000369763 CCDC192P0DO97 292 aa12.96□□□□□ -0.34
LRIF1-201ENST00000369763 CHST3Q7LGC8 479 aa12.96□□□□□ -0.34
LRIF1-201ENST00000369763 NUP62CLQ9H1M0 184 aa12.96□□□□□ -0.34
LRIF1-201ENST00000369763 AGLP35573 1532 aa12.95□□□□□ -0.34
LRIF1-201ENST00000369763 TTC41PQ6P2S7 1318 aa12.95□□□□□ -0.34
LRIF1-201ENST00000369763 TNMDQ9H2S6 317 aa12.95□□□□□ -0.34
LRIF1-201ENST00000369763 KCNF1Q9H3M0 494 aa12.95□□□□□ -0.34
LRIF1-201ENST00000369763 DIP2BQ9P265 1576 aa12.95□□□□□ -0.34
LRIF1-201ENST00000369763 SPDYE4A6NLX3 237 aa12.95□□□□□ -0.34
LRIF1-201ENST00000369763 CBX1P83916 185 aa12.95□□□□□ -0.34
LRIF1-201ENST00000369763 ANO6Q4KMQ2 910 aa12.95□□□□□ -0.34
LRIF1-201ENST00000369763 AKAP4Q5JQC9 854 aa12.95□□□□□ -0.34
LRIF1-201ENST00000369763 COPS6Q7L5N1 327 aa12.95□□□□□ -0.34
LRIF1-201ENST00000369763 ANKRD24Q8TF21 1146 aa12.95□□□□□ -0.34
LRIF1-201ENST00000369763 XAGE3Q8WTP9 111 aa12.94□□□□□ -0.34
LRIF1-201ENST00000369763 TRIM5Q9C035 493 aa12.94□□□□□ -0.34
LRIF1-201ENST00000369763 NLRP2Q9NX02 1062 aa12.94□□□□□ -0.34
LRIF1-201ENST00000369763 RGPD8O14715 1765 aaPredicted RBP12.94□□□□□ -0.34
LRIF1-201ENST00000369763 DYNC1I1O14576 645 aa12.94□□□□□ -0.34
LRIF1-201ENST00000369763 NFATC2IPQ8NCF5 419 aa12.94□□□□□ -0.34
LRIF1-201ENST00000369763 DDX17Q92841 729 aaKnown RBP12.94□□□□□ -0.34
LRIF1-201ENST00000369763 H3BQV1 296 aa12.94□□□□□ -0.34
LRIF1-201ENST00000369763 GCP02774 474 aa12.94□□□□□ -0.34
LRIF1-201ENST00000369763 MAP3K11Q16584 847 aa12.94□□□□□ -0.34
LRIF1-201ENST00000369763 IFFO2Q5TF58 517 aa12.94□□□□□ -0.34
LRIF1-201ENST00000369763 UBE3BQ7Z3V4 1068 aa12.94□□□□□ -0.34
LRIF1-201ENST00000369763 C16orf45Q96MC5 204 aaPredicted RBP12.94□□□□□ -0.34
LRIF1-201ENST00000369763 NEUROD6Q96NK8 337 aa12.94□□□□□ -0.34
LRIF1-201ENST00000369763 DNAJC25Q9H1X3 360 aa12.94□□□□□ -0.34
LRIF1-201ENST00000369763 NR1I2O75469 434 aa12.93□□□□□ -0.34
LRIF1-201ENST00000369763 CCT2P78371 535 aaKnown RBP12.93□□□□□ -0.34
LRIF1-201ENST00000369763 TYRO3Q06418 890 aa12.93□□□□□ -0.34
LRIF1-201ENST00000369763 CCDC186Q7Z3E2 898 aa12.93□□□□□ -0.34
LRIF1-201ENST00000369763 TMEM87AQ8NBN3 555 aa12.93□□□□□ -0.34
LRIF1-201ENST00000369763 ZNF592Q92610 1267 aa12.93□□□□□ -0.34
LRIF1-201ENST00000369763 SH2B1Q9NRF2 756 aaPredicted RBP12.93□□□□□ -0.34
LRIF1-201ENST00000369763 ZNF330Q9Y3S2 320 aaPredicted RBP12.93□□□□□ -0.34
LRIF1-201ENST00000369763 IGKV5-2P06315 115 aa12.93□□□□□ -0.34
LRIF1-201ENST00000369763 RAB11FIP4Q86YS3 637 aa12.93□□□□□ -0.34
LRIF1-201ENST00000369763 MAP4K1Q92918 833 aa12.93□□□□□ -0.34
LRIF1-201ENST00000369763 IGSF3O75054 1194 aa12.93□□□□□ -0.34
LRIF1-201ENST00000369763 TFCP2Q12800 502 aa12.93□□□□□ -0.34
LRIF1-201ENST00000369763 UVSSAQ2YD98 709 aa12.93□□□□□ -0.34
LRIF1-201ENST00000369763 ZSCAN31Q96LW9 406 aaPredicted RBP12.93□□□□□ -0.34
LRIF1-201ENST00000369763 BRF1Q92994 677 aa12.92□□□□□ -0.34
LRIF1-201ENST00000369763 CCDC85AQ96PX6 553 aaPredicted RBP12.92□□□□□ -0.34
LRIF1-201ENST00000369763 RGPD1P0DJD0 1748 aa12.92□□□□□ -0.34
LRIF1-201ENST00000369763 A0A0G2JLW4 131 aa12.92□□□□□ -0.34
LRIF1-201ENST00000369763 LETM1O95202 739 aaPredicted RBP12.92□□□□□ -0.34
LRIF1-201ENST00000369763 TOB2Q14106 344 aaPredicted RBP12.92□□□□□ -0.34
LRIF1-201ENST00000369763 ERC1Q8IUD2 1116 aa12.92□□□□□ -0.34
LRIF1-201ENST00000369763 CEMIPQ8WUJ3 1361 aa12.92□□□□□ -0.34
LRIF1-201ENST00000369763 PSMA5P28066 241 aa12.92□□□□□ -0.34
LRIF1-201ENST00000369763 NEXNQ0ZGT2 675 aa12.92□□□□□ -0.34
LRIF1-201ENST00000369763 RNF20Q5VTR2 975 aa12.92□□□□□ -0.34
LRIF1-201ENST00000369763 Q6ZUG5 572 aa12.92□□□□□ -0.34
LRIF1-201ENST00000369763 MYRIPQ8NFW9 859 aa12.92□□□□□ -0.34
LRIF1-201ENST00000369763 LINS1Q8NG48 757 aa12.92□□□□□ -0.34
LRIF1-201ENST00000369763 FUCA2Q9BTY2 467 aa12.92□□□□□ -0.34
LRIF1-201ENST00000369763 MRVI1Q9Y6F6 885 aa12.92□□□□□ -0.34
LRIF1-201ENST00000369763 DDX58O95786 925 aaKnown RBP12.91□□□□□ -0.34
LRIF1-201ENST00000369763 CSB-PGBD3P0DP91 1061 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms