RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 RGPD5Q99666 1765 aa13.82□□□□□ -0.2
RAB39B-201ENST00000369454 ZKSCAN1P17029 563 aaPredicted RBP13.82□□□□□ -0.2
RAB39B-201ENST00000369454 TFCP2Q12800 502 aa13.82□□□□□ -0.2
RAB39B-201ENST00000369454 TTC14Q96N46 770 aa13.82□□□□□ -0.2
RAB39B-201ENST00000369454 CYP46A1Q9Y6A2 500 aa13.82□□□□□ -0.2
RAB39B-201ENST00000369454 KDM3BQ7LBC6 1761 aa13.82□□□□□ -0.2
RAB39B-201ENST00000369454 SNRPA1P09661 255 aaKnown RBP13.82□□□□□ -0.2
RAB39B-201ENST00000369454 CCDC173Q0VFZ6 552 aa13.82□□□□□ -0.2
RAB39B-201ENST00000369454 FERMT3Q86UX7 667 aa13.82□□□□□ -0.2
RAB39B-201ENST00000369454 HDAC5Q9UQL6 1122 aa13.82□□□□□ -0.2
RAB39B-201ENST00000369454 MEGF6O75095 1541 aa13.82□□□□□ -0.2
RAB39B-201ENST00000369454 GJB2P29033 226 aa13.82□□□□□ -0.2
RAB39B-201ENST00000369454 CLCN1P35523 988 aa13.82□□□□□ -0.2
RAB39B-201ENST00000369454 ZNF589Q86UQ0 364 aaPredicted RBP13.82□□□□□ -0.2
RAB39B-201ENST00000369454 METTL22Q9BUU2 404 aaPredicted RBP13.82□□□□□ -0.2
RAB39B-201ENST00000369454 HEG1Q9ULI3 1381 aa13.82□□□□□ -0.2
RAB39B-201ENST00000369454 CCDC171Q6TFL3 1326 aa13.81□□□□□ -0.2
RAB39B-201ENST00000369454 STX6O43752 255 aa13.81□□□□□ -0.2
RAB39B-201ENST00000369454 SLFNL1Q499Z3 407 aa13.81□□□□□ -0.2
RAB39B-201ENST00000369454 CCDC129Q6ZRS4 1044 aa13.81□□□□□ -0.2
RAB39B-201ENST00000369454 CREB3L3Q68CJ9 461 aa13.81□□□□□ -0.2
RAB39B-201ENST00000369454 TOM1L2Q6ZVM7 507 aa13.81□□□□□ -0.2
RAB39B-201ENST00000369454 NEUROD6Q96NK8 337 aa13.81□□□□□ -0.2
RAB39B-201ENST00000369454 CCDC85AQ96PX6 553 aaPredicted RBP13.81□□□□□ -0.2
RAB39B-201ENST00000369454 STRN4Q9NRL3 753 aa13.81□□□□□ -0.2
RAB39B-201ENST00000369454 FMNL2Q96PY5 1086 aa13.81□□□□□ -0.2
RAB39B-201ENST00000369454 SEC62Q99442 399 aaKnown RBP13.81□□□□□ -0.2
RAB39B-201ENST00000369454 ZBTB3Q9H5J0 574 aa13.81□□□□□ -0.2
RAB39B-201ENST00000369454 NCAPD2Q15021 1401 aa13.81□□□□□ -0.2
RAB39B-201ENST00000369454 FAM173BQ6P4H8 233 aa13.8□□□□□ -0.2
RAB39B-201ENST00000369454 LRSAM1Q6UWE0 723 aa13.8□□□□□ -0.2
RAB39B-201ENST00000369454 MBD3O95983 291 aa13.8□□□□□ -0.2
RAB39B-201ENST00000369454 ME3Q16798 604 aa13.8□□□□□ -0.2
RAB39B-201ENST00000369454 DDX46Q7L014 1031 aaKnown RBP13.8□□□□□ -0.2
RAB39B-201ENST00000369454 PRDM11Q9NQV5 511 aa13.8□□□□□ -0.2
RAB39B-201ENST00000369454 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.8□□□□□ -0.2
RAB39B-201ENST00000369454 RPAP1Q9BWH6 1393 aaPredicted RBP13.8□□□□□ -0.2
RAB39B-201ENST00000369454 PPFIA3O75145 1194 aa13.8□□□□□ -0.2
RAB39B-201ENST00000369454 A1BGP04217 495 aa13.8□□□□□ -0.2
RAB39B-201ENST00000369454 LMBR1LQ6UX01 489 aa13.8□□□□□ -0.2
RAB39B-201ENST00000369454 DCAF5Q96JK2 942 aa13.8□□□□□ -0.2
RAB39B-201ENST00000369454 DBNDD2Q9BQY9 259 aa13.8□□□□□ -0.2
RAB39B-201ENST00000369454 DBNLQ9UJU6 430 aaKnown RBP13.8□□□□□ -0.2
RAB39B-201ENST00000369454 LMO7Q8WWI1 1683 aa13.79□□□□□ -0.2
RAB39B-201ENST00000369454 ZSCAN22P10073 491 aaPredicted RBP13.79□□□□□ -0.2
RAB39B-201ENST00000369454 PLCB2Q00722 1185 aa13.79□□□□□ -0.2
RAB39B-201ENST00000369454 TTLL7Q6ZT98 887 aa13.79□□□□□ -0.2
RAB39B-201ENST00000369454 TUBGCP6Q96RT7 1819 aa13.79□□□□□ -0.2
RAB39B-201ENST00000369454 DNM1Q05193 864 aaKnown RBP13.79□□□□□ -0.2
RAB39B-201ENST00000369454 USP42Q9H9J4 1324 aaKnown RBP13.79□□□□□ -0.2
RAB39B-201ENST00000369454 USP54Q70EL1 1684 aa13.79□□□□□ -0.2
RAB39B-201ENST00000369454 NECTIN1Q15223 517 aa13.78□□□□□ -0.2
RAB39B-201ENST00000369454 TPCN1Q9ULQ1 816 aa13.78□□□□□ -0.2
RAB39B-201ENST00000369454 SLC27A2O14975 620 aa13.78□□□□□ -0.2
RAB39B-201ENST00000369454 MSNP26038 577 aaKnown RBP13.78□□□□□ -0.2
RAB39B-201ENST00000369454 LRRC2Q9BYS8 371 aa13.78□□□□□ -0.2
RAB39B-201ENST00000369454 SLIT3O75094 1523 aa13.78□□□□□ -0.2
RAB39B-201ENST00000369454 PTPN12Q05209 780 aaKnown RBP13.78□□□□□ -0.2
RAB39B-201ENST00000369454 TCHHQ07283 1943 aa13.78□□□□□ -0.2
RAB39B-201ENST00000369454 FOSBP53539 338 aa13.77□□□□□ -0.2
RAB39B-201ENST00000369454 ZNF594Q96JF6 807 aaPredicted RBP13.77□□□□□ -0.2
RAB39B-201ENST00000369454 TIMM10P62072 90 aa13.77□□□□□ -0.21
RAB39B-201ENST00000369454 F13A1P00488 732 aa13.77□□□□□ -0.21
RAB39B-201ENST00000369454 TNNI3KQ59H18 835 aa13.77□□□□□ -0.21
RAB39B-201ENST00000369454 BLOC1S2Q6QNY1 142 aa13.77□□□□□ -0.21
RAB39B-201ENST00000369454 ZSWIM6Q9HCJ5 1215 aa13.77□□□□□ -0.21
RAB39B-201ENST00000369454 FPGT-TNNI3KV9GXZ4 949 aa13.77□□□□□ -0.21
RAB39B-201ENST00000369454 VPS53Q5VIR6 699 aa13.76□□□□□ -0.21
RAB39B-201ENST00000369454 PPP1R9BQ96SB3 815 aa13.76□□□□□ -0.21
RAB39B-201ENST00000369454 ST3GAL1Q11201 340 aa13.76□□□□□ -0.21
RAB39B-201ENST00000369454 MAP4K1Q92918 833 aa13.76□□□□□ -0.21
RAB39B-201ENST00000369454 TSPY26PQ9H489 355 aa13.76□□□□□ -0.21
RAB39B-201ENST00000369454 NAP1L2Q9ULW6 460 aaPredicted RBP13.76□□□□□ -0.21
RAB39B-201ENST00000369454 UTYO14607 1347 aa13.76□□□□□ -0.21
RAB39B-201ENST00000369454 NBPF26B4DH59 902 aa13.76□□□□□ -0.21
RAB39B-201ENST00000369454 NBPF14Q5TI25 921 aa13.76□□□□□ -0.21
RAB39B-201ENST00000369454 LARP1BQ659C4 914 aaKnown RBP13.76□□□□□ -0.21
RAB39B-201ENST00000369454 NBPF10Q6P3W6 841 aaKnown RBP13.76□□□□□ -0.21
RAB39B-201ENST00000369454 NBPF15Q8N660 670 aa13.76□□□□□ -0.21
RAB39B-201ENST00000369454 PTMAP06454 111 aaKnown RBP13.75□□□□□ -0.21
RAB39B-201ENST00000369454 CADPS2Q86UW7 1296 aa13.75□□□□□ -0.21
RAB39B-201ENST00000369454 SYAP1Q96A49 352 aaPredicted RBP13.75□□□□□ -0.21
RAB39B-201ENST00000369454 FGD1P98174 961 aa13.75□□□□□ -0.21
RAB39B-201ENST00000369454 LRP10Q7Z4F1 713 aa13.74□□□□□ -0.21
RAB39B-201ENST00000369454 TAOK2Q9UL54 1235 aa13.74□□□□□ -0.21
RAB39B-201ENST00000369454 KAT6BQ8WYB5 2073 aa13.74□□□□□ -0.21
RAB39B-201ENST00000369454 MST1RQ04912 1400 aa13.74□□□□□ -0.21
RAB39B-201ENST00000369454 GOLIM4O00461 696 aa13.74□□□□□ -0.21
RAB39B-201ENST00000369454 HSP90B1P14625 803 aaKnown RBP13.74□□□□□ -0.21
RAB39B-201ENST00000369454 ZSCAN30Q86W11 494 aa13.74□□□□□ -0.21
RAB39B-201ENST00000369454 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.74□□□□□ -0.21
RAB39B-201ENST00000369454 A0A0G2JS52 829 aa13.74□□□□□ -0.21
RAB39B-201ENST00000369454 EPB41L2O43491 1005 aaKnown RBP13.74□□□□□ -0.21
RAB39B-201ENST00000369454 RNF20Q5VTR2 975 aa13.74□□□□□ -0.21
RAB39B-201ENST00000369454 GIMAP6Q6P9H5 292 aa13.74□□□□□ -0.21
RAB39B-201ENST00000369454 TFIP11Q9UBB9 837 aaKnown RBP13.74□□□□□ -0.21
RAB39B-201ENST00000369454 MTMR6Q9Y217 621 aa13.74□□□□□ -0.21
RAB39B-201ENST00000369454 HIP1O00291 1037 aa13.73□□□□□ -0.21
RAB39B-201ENST00000369454 HCLS1P14317 486 aaPredicted RBP13.73□□□□□ -0.21
RAB39B-201ENST00000369454 RFX5P48382 616 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms