RNA–Protein interactions for RNA: ENST00000369067.7

RPRD2-201, Transcript of regulation of nuclear pre-mRNA domain containing 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RPRD2, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD2-201ENST00000369067 SYNE4Q8N205 404 aa17.46■□□□□ 0.39
RPRD2-201ENST00000369067 ARFGEF2Q9Y6D5 1785 aa17.45■□□□□ 0.38
RPRD2-201ENST00000369067 VAMP4O75379 141 aa17.45■□□□□ 0.38
RPRD2-201ENST00000369067 PPP1R42Q7Z4L9 355 aa17.45■□□□□ 0.38
RPRD2-201ENST00000369067 ISCA1Q9BUE6 129 aa17.45■□□□□ 0.38
RPRD2-201ENST00000369067 UTP14AQ9BVJ6 771 aaKnown RBP17.45■□□□□ 0.38
RPRD2-201ENST00000369067 ZNF219Q9P2Y4 722 aaPredicted RBP17.45■□□□□ 0.38
RPRD2-201ENST00000369067 ADCY9O60503 1353 aa17.44■□□□□ 0.38
RPRD2-201ENST00000369067 ATP5J2-PTCD1G3V325 749 aa17.44■□□□□ 0.38
RPRD2-201ENST00000369067 C21orf2O43822 256 aa17.44■□□□□ 0.38
RPRD2-201ENST00000369067 NPR1P16066 1061 aa17.44■□□□□ 0.38
RPRD2-201ENST00000369067 PRELPP51888 382 aa17.44■□□□□ 0.38
RPRD2-201ENST00000369067 GOLGA2Q08379 1002 aa17.44■□□□□ 0.38
RPRD2-201ENST00000369067 SLC10A5Q5PT55 438 aa17.44■□□□□ 0.38
RPRD2-201ENST00000369067 G2E3Q7L622 706 aa17.44■□□□□ 0.38
RPRD2-201ENST00000369067 CNKSR1Q969H4 720 aa17.44■□□□□ 0.38
RPRD2-201ENST00000369067 CRY2Q49AN0 593 aa17.43■□□□□ 0.38
RPRD2-201ENST00000369067 PRPF40BQ6NWY9 871 aaKnown RBP17.43■□□□□ 0.38
RPRD2-201ENST00000369067 C7orf43Q8WVR3 580 aa17.43■□□□□ 0.38
RPRD2-201ENST00000369067 CCDC88AQ3V6T2 1871 aa17.43■□□□□ 0.38
RPRD2-201ENST00000369067 RIC1Q4ADV7 1423 aa17.42■□□□□ 0.38
RPRD2-201ENST00000369067 NFKBIEO00221 500 aa17.42■□□□□ 0.38
RPRD2-201ENST00000369067 SLC4A2P04920 1241 aa17.42■□□□□ 0.38
RPRD2-201ENST00000369067 RASSF7Q02833 373 aa17.42■□□□□ 0.38
RPRD2-201ENST00000369067 C9orf131Q5VYM1 1079 aa17.42■□□□□ 0.38
RPRD2-201ENST00000369067 RIC3Q7Z5B4 369 aa17.42■□□□□ 0.38
RPRD2-201ENST00000369067 CHMP4AQ9BY43 222 aa17.42■□□□□ 0.38
RPRD2-201ENST00000369067 CACNA1FO60840 1977 aa17.41■□□□□ 0.38
RPRD2-201ENST00000369067 HCLS1P14317 486 aaPredicted RBP17.41■□□□□ 0.38
RPRD2-201ENST00000369067 TRIM28Q13263 835 aaKnown RBP17.41■□□□□ 0.38
RPRD2-201ENST00000369067 STK31Q9BXU1 1019 aa17.41■□□□□ 0.38
RPRD2-201ENST00000369067 MYH16Q9H6N6 1097 aa17.41■□□□□ 0.38
RPRD2-201ENST00000369067 TRMT112Q9UI30 125 aaKnown RBP17.41■□□□□ 0.38
RPRD2-201ENST00000369067 FER1L6Q2WGJ9 1857 aa17.41■□□□□ 0.38
RPRD2-201ENST00000369067 LAMB2P55268 1798 aa17.4■□□□□ 0.38
RPRD2-201ENST00000369067 HOXA10P31260 410 aaPredicted RBP17.4■□□□□ 0.38
RPRD2-201ENST00000369067 OLFM4Q6UX06 510 aa17.4■□□□□ 0.38
RPRD2-201ENST00000369067 MYD88Q99836 296 aa17.4■□□□□ 0.38
RPRD2-201ENST00000369067 PI4KAP2A4QPH2 592 aa17.39■□□□□ 0.37
RPRD2-201ENST00000369067 KSR2Q6VAB6 950 aa17.39■□□□□ 0.37
RPRD2-201ENST00000369067 SLC51AQ86UW1 340 aa17.39■□□□□ 0.37
RPRD2-201ENST00000369067 PI4KAP1Q8N8J0 262 aa17.39■□□□□ 0.37
RPRD2-201ENST00000369067 FAM89AQ96GI7 184 aa17.39■□□□□ 0.37
RPRD2-201ENST00000369067 MAP3K2Q9Y2U5 619 aa17.39■□□□□ 0.37
RPRD2-201ENST00000369067 RNF123Q5XPI4 1314 aa17.39■□□□□ 0.37
RPRD2-201ENST00000369067 DDX60Q8IY21 1712 aaKnown RBP17.38■□□□□ 0.37
RPRD2-201ENST00000369067 SLFN5Q08AF3 891 aa17.38■□□□□ 0.37
RPRD2-201ENST00000369067 CDCA7LQ96GN5 454 aa17.38■□□□□ 0.37
RPRD2-201ENST00000369067 NLRP3Q96P20 1036 aa17.38■□□□□ 0.37
RPRD2-201ENST00000369067 METTL22Q9BUU2 404 aaPredicted RBP17.38■□□□□ 0.37
RPRD2-201ENST00000369067 RNF181Q9P0P0 153 aa17.38■□□□□ 0.37
RPRD2-201ENST00000369067 SH3TC1Q8TE82 1336 aa17.38■□□□□ 0.37
RPRD2-201ENST00000369067 TAF1P21675 1872 aa17.37■□□□□ 0.37
RPRD2-201ENST00000369067 DDX58O95786 925 aaKnown RBP17.37■□□□□ 0.37
RPRD2-201ENST00000369067 ALDH1B1P30837 517 aa17.37■□□□□ 0.37
RPRD2-201ENST00000369067 RTL5Q5HYW3 569 aaPredicted RBP17.37■□□□□ 0.37
RPRD2-201ENST00000369067 ZNF526Q8TF50 670 aaPredicted RBP17.37■□□□□ 0.37
RPRD2-201ENST00000369067 IGKV5-2P06315 115 aa17.36■□□□□ 0.37
RPRD2-201ENST00000369067 FLIIQ13045 1269 aa17.36■□□□□ 0.37
RPRD2-201ENST00000369067 JARID2Q92833 1246 aaPredicted RBP17.36■□□□□ 0.37
RPRD2-201ENST00000369067 RPGRQ92834 1020 aaKnown RBP17.36■□□□□ 0.37
RPRD2-201ENST00000369067 RBM17Q96I25 401 aaKnown RBP17.36■□□□□ 0.37
RPRD2-201ENST00000369067 CRAMP1Q96RY5 1269 aa17.36■□□□□ 0.37
RPRD2-201ENST00000369067 E9PSI1 815 aa17.35■□□□□ 0.37
RPRD2-201ENST00000369067 LMNB1P20700 586 aa17.35■□□□□ 0.37
RPRD2-201ENST00000369067 TRMT2AQ8IZ69 625 aaKnown RBP17.35■□□□□ 0.37
RPRD2-201ENST00000369067 CCDC191Q8NCU4 936 aa17.34■□□□□ 0.37
RPRD2-201ENST00000369067 DICER1Q9UPY3 1922 aaKnown RBP17.34■□□□□ 0.37
RPRD2-201ENST00000369067 SNED1Q8TER0 1413 aa17.33■□□□□ 0.36
RPRD2-201ENST00000369067 ABCC4O15439 1325 aa17.33■□□□□ 0.36
RPRD2-201ENST00000369067 LTBP3Q9NS15 1303 aa17.33■□□□□ 0.36
RPRD2-201ENST00000369067 CCDC93Q567U6 631 aa17.33■□□□□ 0.36
RPRD2-201ENST00000369067 SOGA3Q5TF21 947 aa17.33■□□□□ 0.36
RPRD2-201ENST00000369067 ZBTB38Q8NAP3 1195 aaPredicted RBP17.33■□□□□ 0.36
RPRD2-201ENST00000369067 CWC25Q9NXE8 425 aaPredicted RBP17.33■□□□□ 0.36
RPRD2-201ENST00000369067 IRS4O14654 1257 aaPredicted RBP17.32■□□□□ 0.36
RPRD2-201ENST00000369067 PCCAP05165 728 aaPredicted RBP17.32■□□□□ 0.36
RPRD2-201ENST00000369067 FKBP5Q13451 457 aaPredicted RBP17.32■□□□□ 0.36
RPRD2-201ENST00000369067 CWF19L2Q2TBE0 894 aaKnown RBP17.32■□□□□ 0.36
RPRD2-201ENST00000369067 TAOK3Q9H2K8 898 aa17.32■□□□□ 0.36
RPRD2-201ENST00000369067 NEURL1BA8MQ27 555 aa17.31■□□□□ 0.36
RPRD2-201ENST00000369067 SF3B3Q15393 1217 aaKnown RBP17.31■□□□□ 0.36
RPRD2-201ENST00000369067 GPBP1L1Q9HC44 474 aaPredicted RBP17.31■□□□□ 0.36
RPRD2-201ENST00000369067 COL4A1P02462 1669 aa17.31■□□□□ 0.36
RPRD2-201ENST00000369067 F6X3S4 739 aa17.3■□□□□ 0.36
RPRD2-201ENST00000369067 PPEF1O14829 653 aaPredicted RBP17.3■□□□□ 0.36
RPRD2-201ENST00000369067 FKBP4Q02790 459 aaKnown RBP eCLIP17.3■□□□□ 0.36
RPRD2-201ENST00000369067 RTKN2Q8IZC4 609 aa17.3■□□□□ 0.36
RPRD2-201ENST00000369067 DNAAF4Q8WXU2 420 aa17.3■□□□□ 0.36
RPRD2-201ENST00000369067 TIAM2Q8IVF5 1701 aa17.3■□□□□ 0.36
RPRD2-201ENST00000369067 DDX46Q7L014 1031 aaKnown RBP17.29■□□□□ 0.36
RPRD2-201ENST00000369067 ZNF277Q9NRM2 450 aaPredicted RBP17.29■□□□□ 0.36
RPRD2-201ENST00000369067 KIF3CO14782 793 aa17.28■□□□□ 0.36
RPRD2-201ENST00000369067 BBOX1O75936 387 aa17.28■□□□□ 0.36
RPRD2-201ENST00000369067 NEXNQ0ZGT2 675 aa17.28■□□□□ 0.36
RPRD2-201ENST00000369067 GRAPQ13588 217 aa17.28■□□□□ 0.36
RPRD2-201ENST00000369067 MRPL50Q8N5N7 158 aaKnown RBP17.28■□□□□ 0.36
RPRD2-201ENST00000369067 GRAPLQ8TC17 118 aaPredicted RBP17.28■□□□□ 0.36
RPRD2-201ENST00000369067 NMRK2Q9NPI5 230 aa17.28■□□□□ 0.36
RPRD2-201ENST00000369067 ATP6V0A2Q9Y487 856 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms