RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 AKT1S1Q96B36 256 aa15.38■□□□□ 0.05
TUBE1-202ENST00000368662 USP42Q9H9J4 1324 aaKnown RBP15.38■□□□□ 0.05
TUBE1-202ENST00000368662 UBE3BQ7Z3V4 1068 aa15.38■□□□□ 0.05
TUBE1-202ENST00000368662 ZBTB38Q8NAP3 1195 aaPredicted RBP15.38■□□□□ 0.05
TUBE1-202ENST00000368662 TFCP2L1Q9NZI6 479 aa15.38■□□□□ 0.05
TUBE1-202ENST00000368662 PCCAP05165 728 aaPredicted RBP15.37■□□□□ 0.05
TUBE1-202ENST00000368662 GPTP24298 496 aa15.37■□□□□ 0.05
TUBE1-202ENST00000368662 ATP8B2P98198 1209 aa15.37■□□□□ 0.05
TUBE1-202ENST00000368662 EZH2Q15910 746 aaKnown RBP15.37■□□□□ 0.05
TUBE1-202ENST00000368662 USPL1Q5W0Q7 1092 aa15.37■□□□□ 0.05
TUBE1-202ENST00000368662 CASP7P55210 303 aa15.37■□□□□ 0.05
TUBE1-202ENST00000368662 MTX1Q13505 466 aa15.37■□□□□ 0.05
TUBE1-202ENST00000368662 AMIGO3Q86WK7 504 aa15.37■□□□□ 0.05
TUBE1-202ENST00000368662 SIRT2Q8IXJ6 389 aa15.37■□□□□ 0.05
TUBE1-202ENST00000368662 NIP7Q9Y221 180 aaKnown RBP eCLIP15.37■□□□□ 0.05
TUBE1-202ENST00000368662 PPP1R42Q7Z4L9 355 aa15.36■□□□□ 0.05
TUBE1-202ENST00000368662 GCC1Q96CN9 775 aa15.36■□□□□ 0.05
TUBE1-202ENST00000368662 SUCLG2Q96I99 432 aa15.36■□□□□ 0.05
TUBE1-202ENST00000368662 UBN2Q6ZU65 1347 aa15.36■□□□□ 0.05
TUBE1-202ENST00000368662 HSP90B1P14625 803 aaKnown RBP15.35■□□□□ 0.05
TUBE1-202ENST00000368662 TRMT112Q9UI30 125 aaKnown RBP15.35■□□□□ 0.05
TUBE1-202ENST00000368662 C4AP0C0L4 1744 aa15.35■□□□□ 0.05
TUBE1-202ENST00000368662 CDHR2Q9BYE9 1310 aa15.35■□□□□ 0.05
TUBE1-202ENST00000368662 ZNF827Q17R98 1081 aa15.35■□□□□ 0.05
TUBE1-202ENST00000368662 SMIM5Q71RC9 77 aa15.34■□□□□ 0.05
TUBE1-202ENST00000368662 UTP14AQ9BVJ6 771 aaKnown RBP15.34■□□□□ 0.05
TUBE1-202ENST00000368662 BICC1Q9H694 974 aaKnown RBP15.34■□□□□ 0.05
TUBE1-202ENST00000368662 BCL2L12Q9HB09 334 aa15.34■□□□□ 0.05
TUBE1-202ENST00000368662 SRP68Q9UHB9 627 aaKnown RBP15.34■□□□□ 0.05
TUBE1-202ENST00000368662 SMC5Q8IY18 1101 aa15.34■□□□□ 0.05
TUBE1-202ENST00000368662 SSH3Q8TE77 659 aa15.34■□□□□ 0.05
TUBE1-202ENST00000368662 KAZALD1Q96I82 304 aa15.34■□□□□ 0.05
TUBE1-202ENST00000368662 SETDB2Q96T68 719 aa15.34■□□□□ 0.05
TUBE1-202ENST00000368662 PLA2G12BQ9BX93 195 aa15.34■□□□□ 0.05
TUBE1-202ENST00000368662 STK32BQ9NY57 414 aa15.34■□□□□ 0.05
TUBE1-202ENST00000368662 SRGAP3O43295 1099 aa15.33■□□□□ 0.04
TUBE1-202ENST00000368662 RABL6Q3YEC7 729 aaPredicted RBP15.33■□□□□ 0.04
TUBE1-202ENST00000368662 DEFB132Q7Z7B7 95 aa15.33■□□□□ 0.04
TUBE1-202ENST00000368662 FAM89AQ96GI7 184 aa15.33■□□□□ 0.04
TUBE1-202ENST00000368662 DCTPP1Q9H773 170 aa15.33■□□□□ 0.04
TUBE1-202ENST00000368662 SH3TC1Q8TE82 1336 aa15.33■□□□□ 0.04
TUBE1-202ENST00000368662 PNMA6EA0A0J9YXQ4 647 aa15.32■□□□□ 0.04
TUBE1-202ENST00000368662 SLC15A2Q16348 729 aa15.32■□□□□ 0.04
TUBE1-202ENST00000368662 SUSD4Q5VX71 490 aa15.32■□□□□ 0.04
TUBE1-202ENST00000368662 NYXQ9GZU5 481 aa15.32■□□□□ 0.04
TUBE1-202ENST00000368662 POLA2Q14181 598 aa15.32■□□□□ 0.04
TUBE1-202ENST00000368662 RTL5Q5HYW3 569 aaPredicted RBP15.32■□□□□ 0.04
TUBE1-202ENST00000368662 TBC1D9BQ66K14 1250 aa15.32■□□□□ 0.04
TUBE1-202ENST00000368662 GYS1P13807 737 aa15.31■□□□□ 0.04
TUBE1-202ENST00000368662 JARID2Q92833 1246 aaPredicted RBP15.31■□□□□ 0.04
TUBE1-202ENST00000368662 IRS4O14654 1257 aaPredicted RBP15.31■□□□□ 0.04
TUBE1-202ENST00000368662 NTSR2O95665 410 aa15.31■□□□□ 0.04
TUBE1-202ENST00000368662 CARMIL3Q8ND23 1372 aa15.31■□□□□ 0.04
TUBE1-202ENST00000368662 FOXO4P98177 505 aa15.3■□□□□ 0.04
TUBE1-202ENST00000368662 EPHA10Q5JZY3 1008 aa15.3■□□□□ 0.04
TUBE1-202ENST00000368662 BICDL1Q6ZP65 573 aa15.3■□□□□ 0.04
TUBE1-202ENST00000368662 PNPLA7Q6ZV29 1317 aa15.29■□□□□ 0.04
TUBE1-202ENST00000368662 PDE8AO60658 829 aa15.29■□□□□ 0.04
TUBE1-202ENST00000368662 HSP90AB4PQ58FF6 505 aa15.29■□□□□ 0.04
TUBE1-202ENST00000368662 TPTE2Q6XPS3 522 aa15.29■□□□□ 0.04
TUBE1-202ENST00000368662 COL23A1Q86Y22 540 aaPredicted RBP15.29■□□□□ 0.04
TUBE1-202ENST00000368662 NLGN1Q8N2Q7 840 aa15.29■□□□□ 0.04
TUBE1-202ENST00000368662 MSH5O43196 834 aa15.29■□□□□ 0.04
TUBE1-202ENST00000368662 LMBR1LQ6UX01 489 aa15.29■□□□□ 0.04
TUBE1-202ENST00000368662 NBPF5PQ86XG9 351 aaPredicted RBP15.29■□□□□ 0.04
TUBE1-202ENST00000368662 ANO8Q9HCE9 1232 aaPredicted RBP15.29■□□□□ 0.04
TUBE1-202ENST00000368662 ZBTB47Q9UFB7 747 aaPredicted RBP15.29■□□□□ 0.04
TUBE1-202ENST00000368662 COL24A1Q17RW2 1714 aa15.29■□□□□ 0.04
TUBE1-202ENST00000368662 FAM177BA6PVY3 158 aa15.28■□□□□ 0.04
TUBE1-202ENST00000368662 GTF2E1P29083 439 aaPredicted RBP15.28■□□□□ 0.04
TUBE1-202ENST00000368662 PELP1Q8IZL8 1130 aaKnown RBP15.28■□□□□ 0.04
TUBE1-202ENST00000368662 TUBGCP6Q96RT7 1819 aa15.28■□□□□ 0.04
TUBE1-202ENST00000368662 QSER1Q2KHR3 1735 aa15.28■□□□□ 0.04
TUBE1-202ENST00000368662 CSF1RP07333 972 aa15.28■□□□□ 0.04
TUBE1-202ENST00000368662 NUCB1Q02818 461 aa15.28■□□□□ 0.04
TUBE1-202ENST00000368662 NFIXQ14938 502 aa15.28■□□□□ 0.04
TUBE1-202ENST00000368662 RAB11FIP3O75154 756 aa15.27■□□□□ 0.04
TUBE1-202ENST00000368662 CTSWP56202 376 aa15.27■□□□□ 0.04
TUBE1-202ENST00000368662 UPF1Q92900 1129 aaKnown RBP eCLIP15.27■□□□□ 0.04
TUBE1-202ENST00000368662 NOP58Q9Y2X3 529 aaKnown RBP15.27■□□□□ 0.04
TUBE1-202ENST00000368662 SURF6O75683 361 aaKnown RBP15.26■□□□□ 0.03
TUBE1-202ENST00000368662 CHMP3Q9Y3E7 222 aa15.26■□□□□ 0.03
TUBE1-202ENST00000368662 TM4SF1P30408 202 aa15.26■□□□□ 0.03
TUBE1-202ENST00000368662 CCDC57Q2TAC2 916 aa15.26■□□□□ 0.03
TUBE1-202ENST00000368662 SLC10A5Q5PT55 438 aa15.26■□□□□ 0.03
TUBE1-202ENST00000368662 ANKRD45Q5TZF3 282 aa15.26■□□□□ 0.03
TUBE1-202ENST00000368662 SYNE4Q8N205 404 aa15.26■□□□□ 0.03
TUBE1-202ENST00000368662 COPRSQ9NQ92 184 aa15.26■□□□□ 0.03
TUBE1-202ENST00000368662 PDZRN3Q9UPQ7 1066 aa15.26■□□□□ 0.03
TUBE1-202ENST00000368662 EXOC6BQ9Y2D4 811 aa15.26■□□□□ 0.03
TUBE1-202ENST00000368662 NPHP1O15259 732 aa15.25■□□□□ 0.03
TUBE1-202ENST00000368662 CHD1LQ86WJ1 897 aa15.25■□□□□ 0.03
TUBE1-202ENST00000368662 NUTM1Q86Y26 1132 aa15.25■□□□□ 0.03
TUBE1-202ENST00000368662 ERC1Q8IUD2 1116 aa15.25■□□□□ 0.03
TUBE1-202ENST00000368662 TTLL11Q8NHH1 800 aa15.25■□□□□ 0.03
TUBE1-202ENST00000368662 LAMB2P55268 1798 aa15.25■□□□□ 0.03
TUBE1-202ENST00000368662 ERFEQ4G0M1 354 aa15.25■□□□□ 0.03
TUBE1-202ENST00000368662 CNBD1Q8NA66 436 aa15.25■□□□□ 0.03
TUBE1-202ENST00000368662 LRRCC1Q9C099 1032 aa15.25■□□□□ 0.03
TUBE1-202ENST00000368662 MYH3P11055 1940 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms