RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 NYXQ9GZU5 481 aa19.31■□□□□ 0.68
SMPDL3A-201ENST00000368440 GTF2E1P29083 439 aaPredicted RBP19.3■□□□□ 0.68
SMPDL3A-201ENST00000368440 GPR162Q16538 588 aa19.3■□□□□ 0.68
SMPDL3A-201ENST00000368440 PPP1R42Q7Z4L9 355 aa19.3■□□□□ 0.68
SMPDL3A-201ENST00000368440 C2CD5Q86YS7 1000 aa19.3■□□□□ 0.68
SMPDL3A-201ENST00000368440 ARFGEF1Q9Y6D6 1849 aa19.29■□□□□ 0.68
SMPDL3A-201ENST00000368440 FKBP5Q13451 457 aaPredicted RBP19.29■□□□□ 0.68
SMPDL3A-201ENST00000368440 SYNE4Q8N205 404 aa19.29■□□□□ 0.68
SMPDL3A-201ENST00000368440 SSH1Q8WYL5 1049 aa19.29■□□□□ 0.68
SMPDL3A-201ENST00000368440 METTL22Q9BUU2 404 aaPredicted RBP19.29■□□□□ 0.68
SMPDL3A-201ENST00000368440 BCL2L13Q9BXK5 485 aa19.29■□□□□ 0.68
SMPDL3A-201ENST00000368440 UTRNP46939 3433 aa19.29■□□□□ 0.68
SMPDL3A-201ENST00000368440 PDE6BP35913 854 aa19.28■□□□□ 0.68
SMPDL3A-201ENST00000368440 MRPL50Q8N5N7 158 aaKnown RBP19.28■□□□□ 0.68
SMPDL3A-201ENST00000368440 UTP14AQ9BVJ6 771 aaKnown RBP19.28■□□□□ 0.68
SMPDL3A-201ENST00000368440 RIC1Q4ADV7 1423 aa19.27■□□□□ 0.68
SMPDL3A-201ENST00000368440 H0YIN7 160 aa19.27■□□□□ 0.68
SMPDL3A-201ENST00000368440 TRMT112Q9UI30 125 aaKnown RBP19.27■□□□□ 0.68
SMPDL3A-201ENST00000368440 IGKV5-2P06315 115 aa19.26■□□□□ 0.67
SMPDL3A-201ENST00000368440 TRIM28Q13263 835 aaKnown RBP19.26■□□□□ 0.67
SMPDL3A-201ENST00000368440 PIM2Q9P1W9 311 aa19.26■□□□□ 0.67
SMPDL3A-201ENST00000368440 BCS1LQ9Y276 419 aa19.26■□□□□ 0.67
SMPDL3A-201ENST00000368440 F6X3S4 739 aa19.26■□□□□ 0.67
SMPDL3A-201ENST00000368440 C3orf67Q6ZVT6 689 aa19.26■□□□□ 0.67
SMPDL3A-201ENST00000368440 KLRG2A4D1S0 409 aaPredicted RBP19.25■□□□□ 0.67
SMPDL3A-201ENST00000368440 DCAF8L1A6NGE4 600 aa19.25■□□□□ 0.67
SMPDL3A-201ENST00000368440 SRGNP10124 158 aa19.25■□□□□ 0.67
SMPDL3A-201ENST00000368440 CWF19L2Q2TBE0 894 aaKnown RBP19.25■□□□□ 0.67
SMPDL3A-201ENST00000368440 DNAAF4Q8WXU2 420 aa19.25■□□□□ 0.67
SMPDL3A-201ENST00000368440 RNF123Q5XPI4 1314 aa19.24■□□□□ 0.67
SMPDL3A-201ENST00000368440 CENPBP07199 599 aaPredicted RBP19.24■□□□□ 0.67
SMPDL3A-201ENST00000368440 CT47B1P0C2W7 299 aaPredicted RBP19.24■□□□□ 0.67
SMPDL3A-201ENST00000368440 ALDH1L2Q3SY69 923 aa19.24■□□□□ 0.67
SMPDL3A-201ENST00000368440 RTL5Q5HYW3 569 aaPredicted RBP19.24■□□□□ 0.67
SMPDL3A-201ENST00000368440 FAM89AQ96GI7 184 aa19.24■□□□□ 0.67
SMPDL3A-201ENST00000368440 SLX4Q8IY92 1834 aa19.24■□□□□ 0.67
SMPDL3A-201ENST00000368440 SH3TC1Q8TE82 1336 aa19.24■□□□□ 0.67
SMPDL3A-201ENST00000368440 HCLS1P14317 486 aaPredicted RBP19.24■□□□□ 0.67
SMPDL3A-201ENST00000368440 ZNF622Q969S3 477 aaKnown RBP eCLIP19.24■□□□□ 0.67
SMPDL3A-201ENST00000368440 SMC4Q9NTJ3 1288 aa19.24■□□□□ 0.67
SMPDL3A-201ENST00000368440 DALRD3Q5D0E6 543 aaKnown RBP19.23■□□□□ 0.67
SMPDL3A-201ENST00000368440 CCDC191Q8NCU4 936 aa19.23■□□□□ 0.67
SMPDL3A-201ENST00000368440 JARID2Q92833 1246 aaPredicted RBP19.23■□□□□ 0.67
SMPDL3A-201ENST00000368440 PDZRN3Q9UPQ7 1066 aa19.23■□□□□ 0.67
SMPDL3A-201ENST00000368440 RARSP54136 660 aaKnown RBP19.22■□□□□ 0.67
SMPDL3A-201ENST00000368440 NEXNQ0ZGT2 675 aa19.22■□□□□ 0.67
SMPDL3A-201ENST00000368440 SLC10A5Q5PT55 438 aa19.22■□□□□ 0.67
SMPDL3A-201ENST00000368440 CWC25Q9NXE8 425 aaPredicted RBP19.22■□□□□ 0.67
SMPDL3A-201ENST00000368440 NEURL1BA8MQ27 555 aa19.22■□□□□ 0.67
SMPDL3A-201ENST00000368440 CRY2Q49AN0 593 aa19.22■□□□□ 0.67
SMPDL3A-201ENST00000368440 MASTLQ96GX5 879 aa19.22■□□□□ 0.67
SMPDL3A-201ENST00000368440 STYK1Q6J9G0 422 aa19.21■□□□□ 0.67
SMPDL3A-201ENST00000368440 TTLL6Q8N841 843 aa19.21■□□□□ 0.67
SMPDL3A-201ENST00000368440 TAF1P21675 1872 aa19.21■□□□□ 0.67
SMPDL3A-201ENST00000368440 CHD4Q14839 1912 aa19.2■□□□□ 0.66
SMPDL3A-201ENST00000368440 NPR1P16066 1061 aa19.2■□□□□ 0.66
SMPDL3A-201ENST00000368440 ZBTB38Q8NAP3 1195 aaPredicted RBP19.2■□□□□ 0.66
SMPDL3A-201ENST00000368440 GRIN3BO60391 1043 aa19.19■□□□□ 0.66
SMPDL3A-201ENST00000368440 PCCAP05165 728 aaPredicted RBP19.19■□□□□ 0.66
SMPDL3A-201ENST00000368440 BEND3Q5T5X7 828 aa19.19■□□□□ 0.66
SMPDL3A-201ENST00000368440 LINS1Q8NG48 757 aa19.19■□□□□ 0.66
SMPDL3A-201ENST00000368440 NLRP3Q96P20 1036 aa19.19■□□□□ 0.66
SMPDL3A-201ENST00000368440 PTPRCP08575 1304 aa19.19■□□□□ 0.66
SMPDL3A-201ENST00000368440 IRS4O14654 1257 aaPredicted RBP19.18■□□□□ 0.66
SMPDL3A-201ENST00000368440 PRPF40BQ6NWY9 871 aaKnown RBP19.18■□□□□ 0.66
SMPDL3A-201ENST00000368440 ZNF219Q9P2Y4 722 aaPredicted RBP19.18■□□□□ 0.66
SMPDL3A-201ENST00000368440 COL4A1P02462 1669 aa19.18■□□□□ 0.66
SMPDL3A-201ENST00000368440 GCKRQ14397 625 aa19.18■□□□□ 0.66
SMPDL3A-201ENST00000368440 SLC4A10Q6U841 1118 aa19.18■□□□□ 0.66
SMPDL3A-201ENST00000368440 RPGRQ92834 1020 aaKnown RBP19.18■□□□□ 0.66
SMPDL3A-201ENST00000368440 MYH3P11055 1940 aa19.17■□□□□ 0.66
SMPDL3A-201ENST00000368440 CNKSR1Q969H4 720 aa19.17■□□□□ 0.66
SMPDL3A-201ENST00000368440 NOB1Q9ULX3 412 aaKnown RBP19.17■□□□□ 0.66
SMPDL3A-201ENST00000368440 BCAR3O75815 825 aa19.16■□□□□ 0.66
SMPDL3A-201ENST00000368440 BRPF1P55201 1214 aaPredicted RBP19.16■□□□□ 0.66
SMPDL3A-201ENST00000368440 SLC51AQ86UW1 340 aa19.16■□□□□ 0.66
SMPDL3A-201ENST00000368440 FER1L6Q2WGJ9 1857 aa19.16■□□□□ 0.66
SMPDL3A-201ENST00000368440 C21orf2O43822 256 aa19.16■□□□□ 0.66
SMPDL3A-201ENST00000368440 HOXA10P31260 410 aaPredicted RBP19.16■□□□□ 0.66
SMPDL3A-201ENST00000368440 CDHR2Q9BYE9 1310 aa19.15■□□□□ 0.66
SMPDL3A-201ENST00000368440 ARHGAP27Q6ZUM4 889 aa19.15■□□□□ 0.66
SMPDL3A-201ENST00000368440 UBE3BQ7Z3V4 1068 aa19.15■□□□□ 0.66
SMPDL3A-201ENST00000368440 H7C1W4 665 aa19.14■□□□□ 0.65
SMPDL3A-201ENST00000368440 CASP7P55210 303 aa19.14■□□□□ 0.65
SMPDL3A-201ENST00000368440 OLFM4Q6UX06 510 aa19.14■□□□□ 0.65
SMPDL3A-201ENST00000368440 ABCC4O15439 1325 aa19.14■□□□□ 0.65
SMPDL3A-201ENST00000368440 RBM17Q96I25 401 aaKnown RBP19.14■□□□□ 0.65
SMPDL3A-201ENST00000368440 SBF1O95248 1867 aa19.13■□□□□ 0.65
SMPDL3A-201ENST00000368440 ALDH1B1P30837 517 aa19.13■□□□□ 0.65
SMPDL3A-201ENST00000368440 SF3B3Q15393 1217 aaKnown RBP19.13■□□□□ 0.65
SMPDL3A-201ENST00000368440 C7orf43Q8WVR3 580 aa19.13■□□□□ 0.65
SMPDL3A-201ENST00000368440 CRAMP1Q96RY5 1269 aa19.13■□□□□ 0.65
SMPDL3A-201ENST00000368440 SRCIN1Q9C0H9 1055 aa19.13■□□□□ 0.65
SMPDL3A-201ENST00000368440 KIF16BQ96L93 1317 aa19.13■□□□□ 0.65
SMPDL3A-201ENST00000368440 CCDC88AQ3V6T2 1871 aa19.12■□□□□ 0.65
SMPDL3A-201ENST00000368440 PDE8AO60658 829 aa19.11■□□□□ 0.65
SMPDL3A-201ENST00000368440 ALDH1L1O75891 902 aa19.11■□□□□ 0.65
SMPDL3A-201ENST00000368440 RASSF7Q02833 373 aa19.11■□□□□ 0.65
SMPDL3A-201ENST00000368440 TNNQ9UQP3 1299 aa19.11■□□□□ 0.65
SMPDL3A-201ENST00000368440 NFKBIEO00221 500 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms