RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 H0YIN7 160 aa16.06■□□□□ 0.16
EFNA1-201ENST00000368406 CHRNA5P30532 468 aa16.06■□□□□ 0.16
EFNA1-201ENST00000368406 NEXNQ0ZGT2 675 aa16.06■□□□□ 0.16
EFNA1-201ENST00000368406 ZKSCAN2Q63HK3 967 aa16.06■□□□□ 0.16
EFNA1-201ENST00000368406 SLC4A10Q6U841 1118 aa16.06■□□□□ 0.16
EFNA1-201ENST00000368406 PI4KAP1Q8N8J0 262 aa16.06■□□□□ 0.16
EFNA1-201ENST00000368406 API5Q9BZZ5 524 aaKnown RBP16.06■□□□□ 0.16
EFNA1-201ENST00000368406 BRCA1P38398 1863 aaKnown RBP16.06■□□□□ 0.16
EFNA1-201ENST00000368406 KLRG2A4D1S0 409 aaPredicted RBP16.05■□□□□ 0.16
EFNA1-201ENST00000368406 GPTP24298 496 aa16.05■□□□□ 0.16
EFNA1-201ENST00000368406 SUSD4Q5VX71 490 aa16.05■□□□□ 0.16
EFNA1-201ENST00000368406 KSR2Q6VAB6 950 aa16.05■□□□□ 0.16
EFNA1-201ENST00000368406 PPP1R42Q7Z4L9 355 aa16.05■□□□□ 0.16
EFNA1-201ENST00000368406 FTSJ3Q8IY81 847 aaKnown RBP16.05■□□□□ 0.16
EFNA1-201ENST00000368406 ADCY9O60503 1353 aa16.05■□□□□ 0.16
EFNA1-201ENST00000368406 ANKRD31Q8N7Z5 1873 aa16.04■□□□□ 0.16
EFNA1-201ENST00000368406 F6X3S4 739 aa16.04■□□□□ 0.16
EFNA1-201ENST00000368406 GTF2E1P29083 439 aaPredicted RBP16.04■□□□□ 0.16
EFNA1-201ENST00000368406 BRPF1P55201 1214 aaPredicted RBP16.04■□□□□ 0.16
EFNA1-201ENST00000368406 TRIM28Q13263 835 aaKnown RBP16.04■□□□□ 0.16
EFNA1-201ENST00000368406 DALRD3Q5D0E6 543 aaKnown RBP16.04■□□□□ 0.16
EFNA1-201ENST00000368406 C2CD5Q86YS7 1000 aa16.04■□□□□ 0.16
EFNA1-201ENST00000368406 DNAAF4Q8WXU2 420 aa16.04■□□□□ 0.16
EFNA1-201ENST00000368406 MYD88Q99836 296 aa16.04■□□□□ 0.16
EFNA1-201ENST00000368406 RNF123Q5XPI4 1314 aa16.04■□□□□ 0.16
EFNA1-201ENST00000368406 FAM177BA6PVY3 158 aa16.03■□□□□ 0.16
EFNA1-201ENST00000368406 NLRP10Q86W26 655 aa16.03■□□□□ 0.16
EFNA1-201ENST00000368406 CCDC24Q8N4L8 307 aa16.03■□□□□ 0.16
EFNA1-201ENST00000368406 UTP14AQ9BVJ6 771 aaKnown RBP16.03■□□□□ 0.16
EFNA1-201ENST00000368406 NTSR2O95665 410 aa16.02■□□□□ 0.16
EFNA1-201ENST00000368406 SRGNP10124 158 aa16.02■□□□□ 0.16
EFNA1-201ENST00000368406 ATF7IPQ6VMQ6 1270 aa16.02■□□□□ 0.16
EFNA1-201ENST00000368406 ARHGAP45Q92619 1136 aa16.02■□□□□ 0.16
EFNA1-201ENST00000368406 CLUAP1Q96AJ1 413 aa16.02■□□□□ 0.16
EFNA1-201ENST00000368406 ISCA1Q9BUE6 129 aa16.02■□□□□ 0.16
EFNA1-201ENST00000368406 BCS1LQ9Y276 419 aa16.02■□□□□ 0.16
EFNA1-201ENST00000368406 DLEC1Q9Y238 1755 aa16.02■□□□□ 0.16
EFNA1-201ENST00000368406 RIC1Q4ADV7 1423 aa16.02■□□□□ 0.15
EFNA1-201ENST00000368406 PLIN1O60240 522 aa16.02■□□□□ 0.15
EFNA1-201ENST00000368406 MS4A1P11836 297 aa16.02■□□□□ 0.15
EFNA1-201ENST00000368406 SLC10A5Q5PT55 438 aa16.02■□□□□ 0.15
EFNA1-201ENST00000368406 STYK1Q6J9G0 422 aa16.02■□□□□ 0.15
EFNA1-201ENST00000368406 NUTM1Q86Y26 1132 aa16.02■□□□□ 0.15
EFNA1-201ENST00000368406 TTLL6Q8N841 843 aa16.02■□□□□ 0.15
EFNA1-201ENST00000368406 METTL22Q9BUU2 404 aaPredicted RBP16.02■□□□□ 0.15
EFNA1-201ENST00000368406 WWC3Q9ULE0 1092 aa16.02■□□□□ 0.15
EFNA1-201ENST00000368406 ATP5J2-PTCD1G3V325 749 aa16.01■□□□□ 0.15
EFNA1-201ENST00000368406 TRIM27P14373 513 aa16.01■□□□□ 0.15
EFNA1-201ENST00000368406 RRP1P56182 461 aaKnown RBP16.01■□□□□ 0.15
EFNA1-201ENST00000368406 ERFEQ4G0M1 354 aa16.01■□□□□ 0.15
EFNA1-201ENST00000368406 MASTLQ96GX5 879 aa16.01■□□□□ 0.15
EFNA1-201ENST00000368406 CHD4Q14839 1912 aa16.01■□□□□ 0.15
EFNA1-201ENST00000368406 ARFGEF1Q9Y6D6 1849 aa16■□□□□ 0.15
EFNA1-201ENST00000368406 CRY2Q49AN0 593 aa16■□□□□ 0.15
EFNA1-201ENST00000368406 DZIP1LQ8IYY4 767 aaKnown RBP16■□□□□ 0.15
EFNA1-201ENST00000368406 CNKSR1Q969H4 720 aa16■□□□□ 0.15
EFNA1-201ENST00000368406 NPR1P16066 1061 aa15.99■□□□□ 0.15
EFNA1-201ENST00000368406 ZNF622Q969S3 477 aaKnown RBP eCLIP15.99■□□□□ 0.15
EFNA1-201ENST00000368406 SRCIN1Q9C0H9 1055 aa15.99■□□□□ 0.15
EFNA1-201ENST00000368406 TRMT112Q9UI30 125 aaKnown RBP15.99■□□□□ 0.15
EFNA1-201ENST00000368406 SUPT16HQ9Y5B9 1047 aaKnown RBP15.99■□□□□ 0.15
EFNA1-201ENST00000368406 ABCC12Q96J65 1359 aa15.99■□□□□ 0.15
EFNA1-201ENST00000368406 CCT4P50991 539 aaKnown RBP15.98■□□□□ 0.15
EFNA1-201ENST00000368406 CCDC191Q8NCU4 936 aa15.98■□□□□ 0.15
EFNA1-201ENST00000368406 LINS1Q8NG48 757 aa15.98■□□□□ 0.15
EFNA1-201ENST00000368406 CWC25Q9NXE8 425 aaPredicted RBP15.98■□□□□ 0.15
EFNA1-201ENST00000368406 SH3TC1Q8TE82 1336 aa15.98■□□□□ 0.15
EFNA1-201ENST00000368406 ABCC4O15439 1325 aa15.97■□□□□ 0.15
EFNA1-201ENST00000368406 COL11A2P13942 1736 aaPredicted RBP15.97■□□□□ 0.15
EFNA1-201ENST00000368406 CWF19L2Q2TBE0 894 aaKnown RBP15.97■□□□□ 0.15
EFNA1-201ENST00000368406 ITPRIPQ8IWB1 547 aa15.97■□□□□ 0.15
EFNA1-201ENST00000368406 NLRP3Q96P20 1036 aa15.97■□□□□ 0.15
EFNA1-201ENST00000368406 TNNQ9UQP3 1299 aa15.97■□□□□ 0.15
EFNA1-201ENST00000368406 NEURL1BA8MQ27 555 aa15.96■□□□□ 0.15
EFNA1-201ENST00000368406 YY1P25490 414 aa15.96■□□□□ 0.15
EFNA1-201ENST00000368406 ALDH1B1P30837 517 aa15.96■□□□□ 0.15
EFNA1-201ENST00000368406 HOXA10P31260 410 aaPredicted RBP15.96■□□□□ 0.15
EFNA1-201ENST00000368406 PANK1Q8TE04 598 aa15.96■□□□□ 0.15
EFNA1-201ENST00000368406 ALDH1L1O75891 902 aa15.95■□□□□ 0.14
EFNA1-201ENST00000368406 BEND3Q5T5X7 828 aa15.95■□□□□ 0.14
EFNA1-201ENST00000368406 ARHGAP27Q6ZUM4 889 aa15.95■□□□□ 0.14
EFNA1-201ENST00000368406 ZBTB38Q8NAP3 1195 aaPredicted RBP15.95■□□□□ 0.14
EFNA1-201ENST00000368406 C9orf78Q9NZ63 289 aaPredicted RBP15.95■□□□□ 0.14
EFNA1-201ENST00000368406 IGKV5-2P06315 115 aa15.94■□□□□ 0.14
EFNA1-201ENST00000368406 HSP90B1P14625 803 aaKnown RBP15.94■□□□□ 0.14
EFNA1-201ENST00000368406 PRPF40BQ6NWY9 871 aaKnown RBP15.94■□□□□ 0.14
EFNA1-201ENST00000368406 TMEM57Q8N5G2 664 aa15.94■□□□□ 0.14
EFNA1-201ENST00000368406 TNRC6CQ9HCJ0 1690 aaKnown RBP15.94■□□□□ 0.14
EFNA1-201ENST00000368406 RTL5Q5HYW3 569 aaPredicted RBP15.94■□□□□ 0.14
EFNA1-201ENST00000368406 SYNE4Q8N205 404 aa15.94■□□□□ 0.14
EFNA1-201ENST00000368406 RPGRQ92834 1020 aaKnown RBP15.94■□□□□ 0.14
EFNA1-201ENST00000368406 FAM89AQ96GI7 184 aa15.94■□□□□ 0.14
EFNA1-201ENST00000368406 CRAMP1Q96RY5 1269 aa15.94■□□□□ 0.14
EFNA1-201ENST00000368406 SLX4Q8IY92 1834 aa15.93■□□□□ 0.14
EFNA1-201ENST00000368406 PCCAP05165 728 aaPredicted RBP15.93■□□□□ 0.14
EFNA1-201ENST00000368406 HCLS1P14317 486 aaPredicted RBP15.93■□□□□ 0.14
EFNA1-201ENST00000368406 GCKRQ14397 625 aa15.93■□□□□ 0.14
EFNA1-201ENST00000368406 PDE3AQ14432 1141 aa15.93■□□□□ 0.14
EFNA1-201ENST00000368406 SOGA3Q5TF21 947 aa15.93■□□□□ 0.14
EFNA1-201ENST00000368406 INTS3Q68E01 1043 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 911.7 ms