RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 PTPRCP08575 1304 aa23.81■■□□□ 1.4
LMNA-204ENST00000368298 N4BP2Q86UW6 1770 aaPredicted RBP23.81■■□□□ 1.4
LMNA-204ENST00000368298 FAM177BA6PVY3 158 aa23.81■■□□□ 1.4
LMNA-204ENST00000368298 KCNA3P22001 575 aa23.81■■□□□ 1.4
LMNA-204ENST00000368298 SLC10A5Q5PT55 438 aa23.81■■□□□ 1.4
LMNA-204ENST00000368298 SMC4Q9NTJ3 1288 aa23.81■■□□□ 1.4
LMNA-204ENST00000368298 IGKV5-2P06315 115 aa23.8■■□□□ 1.4
LMNA-204ENST00000368298 DPEP1P16444 411 aa23.8■■□□□ 1.4
LMNA-204ENST00000368298 GTF2E1P29083 439 aaPredicted RBP23.8■■□□□ 1.4
LMNA-204ENST00000368298 NEXNQ0ZGT2 675 aa23.8■■□□□ 1.4
LMNA-204ENST00000368298 CCDC24Q8N4L8 307 aa23.8■■□□□ 1.4
LMNA-204ENST00000368298 A0A0G2JLW4 131 aa23.79■■□□□ 1.4
LMNA-204ENST00000368298 ERFEQ4G0M1 354 aa23.79■■□□□ 1.4
LMNA-204ENST00000368298 NUTM1Q86Y26 1132 aa23.79■■□□□ 1.4
LMNA-204ENST00000368298 BCL2L13Q9BXK5 485 aa23.79■■□□□ 1.4
LMNA-204ENST00000368298 TRMT112Q9UI30 125 aaKnown RBP23.79■■□□□ 1.4
LMNA-204ENST00000368298 BRCA1P38398 1863 aaKnown RBP23.79■■□□□ 1.4
LMNA-204ENST00000368298 DLEC1Q9Y238 1755 aa23.78■■□□□ 1.4
LMNA-204ENST00000368298 LINS1Q8NG48 757 aa23.78■■□□□ 1.4
LMNA-204ENST00000368298 ABCC12Q96J65 1359 aa23.77■■□□□ 1.4
LMNA-204ENST00000368298 SH3TC1Q8TE82 1336 aa23.77■■□□□ 1.4
LMNA-204ENST00000368298 NEURL1BA8MQ27 555 aa23.76■■□□□ 1.39
LMNA-204ENST00000368298 F6X3S4 739 aa23.76■■□□□ 1.39
LMNA-204ENST00000368298 H0YIN7 160 aa23.76■■□□□ 1.39
LMNA-204ENST00000368298 ZBTB38Q8NAP3 1195 aaPredicted RBP23.76■■□□□ 1.39
LMNA-204ENST00000368298 CWC25Q9NXE8 425 aaPredicted RBP23.76■■□□□ 1.39
LMNA-204ENST00000368298 SRGNP10124 158 aa23.75■■□□□ 1.39
LMNA-204ENST00000368298 CHRNA5P30532 468 aa23.75■■□□□ 1.39
LMNA-204ENST00000368298 BEND3Q5T5X7 828 aa23.75■■□□□ 1.39
LMNA-204ENST00000368298 PCCAP05165 728 aaPredicted RBP23.75■■□□□ 1.39
LMNA-204ENST00000368298 CWF19L2Q2TBE0 894 aaKnown RBP23.75■■□□□ 1.39
LMNA-204ENST00000368298 CRY2Q49AN0 593 aa23.75■■□□□ 1.39
LMNA-204ENST00000368298 C2CD5Q86YS7 1000 aa23.75■■□□□ 1.39
LMNA-204ENST00000368298 ARHGAP45Q92619 1136 aa23.75■■□□□ 1.39
LMNA-204ENST00000368298 PIM2Q9P1W9 311 aa23.75■■□□□ 1.39
LMNA-204ENST00000368298 KIF16BQ96L93 1317 aa23.74■■□□□ 1.39
LMNA-204ENST00000368298 SYNE4Q8N205 404 aa23.74■■□□□ 1.39
LMNA-204ENST00000368298 COL11A2P13942 1736 aaPredicted RBP23.74■■□□□ 1.39
LMNA-204ENST00000368298 TNRC6CQ9HCJ0 1690 aaKnown RBP23.73■■□□□ 1.39
LMNA-204ENST00000368298 DCAF8L1A6NGE4 600 aa23.73■■□□□ 1.39
LMNA-204ENST00000368298 FAM89AQ96GI7 184 aa23.73■■□□□ 1.39
LMNA-204ENST00000368298 NOB1Q9ULX3 412 aaKnown RBP23.73■■□□□ 1.39
LMNA-204ENST00000368298 GCKRQ14397 625 aa23.72■■□□□ 1.39
LMNA-204ENST00000368298 STYK1Q6J9G0 422 aa23.72■■□□□ 1.39
LMNA-204ENST00000368298 MASTLQ96GX5 879 aa23.72■■□□□ 1.39
LMNA-204ENST00000368298 DDX60Q8IY21 1712 aaKnown RBP23.72■■□□□ 1.39
LMNA-204ENST00000368298 BCAR3O75815 825 aa23.71■■□□□ 1.39
LMNA-204ENST00000368298 ALDH1L1O75891 902 aa23.71■■□□□ 1.39
LMNA-204ENST00000368298 NLRP3Q96P20 1036 aa23.71■■□□□ 1.39
LMNA-204ENST00000368298 H7C1W4 665 aa23.7■■□□□ 1.38
LMNA-204ENST00000368298 NPR1P16066 1061 aa23.7■■□□□ 1.38
LMNA-204ENST00000368298 LAMB2P55268 1798 aa23.7■■□□□ 1.38
LMNA-204ENST00000368298 CDHR2Q9BYE9 1310 aa23.7■■□□□ 1.38
LMNA-204ENST00000368298 HSP90B1P14625 803 aaKnown RBP23.69■■□□□ 1.38
LMNA-204ENST00000368298 API5Q9BZZ5 524 aaKnown RBP23.69■■□□□ 1.38
LMNA-204ENST00000368298 IRS4O14654 1257 aaPredicted RBP23.68■■□□□ 1.38
LMNA-204ENST00000368298 IPO8O15397 1037 aaKnown RBP23.68■■□□□ 1.38
LMNA-204ENST00000368298 HCLS1P14317 486 aaPredicted RBP23.68■■□□□ 1.38
LMNA-204ENST00000368298 YBX3P16989 372 aaKnown RBP eCLIP23.68■■□□□ 1.38
LMNA-204ENST00000368298 HOXA10P31260 410 aaPredicted RBP23.68■■□□□ 1.38
LMNA-204ENST00000368298 SLC4A10Q6U841 1118 aa23.68■■□□□ 1.38
LMNA-204ENST00000368298 TTLL6Q8N841 843 aa23.68■■□□□ 1.38
LMNA-204ENST00000368298 SRCIN1Q9C0H9 1055 aa23.68■■□□□ 1.38
LMNA-204ENST00000368298 ARFGEF1Q9Y6D6 1849 aa23.68■■□□□ 1.38
LMNA-204ENST00000368298 GPR162Q16538 588 aa23.68■■□□□ 1.38
LMNA-204ENST00000368298 DALRD3Q5D0E6 543 aaKnown RBP23.68■■□□□ 1.38
LMNA-204ENST00000368298 C3orf67Q6ZVT6 689 aa23.68■■□□□ 1.38
LMNA-204ENST00000368298 CNKSR1Q969H4 720 aa23.68■■□□□ 1.38
LMNA-204ENST00000368298 CASP7P55210 303 aa23.67■■□□□ 1.38
LMNA-204ENST00000368298 SF3B3Q15393 1217 aaKnown RBP23.67■■□□□ 1.38
LMNA-204ENST00000368298 RTL5Q5HYW3 569 aaPredicted RBP23.66■■□□□ 1.38
LMNA-204ENST00000368298 ZNF622Q969S3 477 aaKnown RBP eCLIP23.66■■□□□ 1.382e-8■□□□□ 8.3
LMNA-204ENST00000368298 WWC3Q9ULE0 1092 aa23.66■■□□□ 1.38
LMNA-204ENST00000368298 GRIN3BO60391 1043 aa23.65■■□□□ 1.38
LMNA-204ENST00000368298 ALDH1B1P30837 517 aa23.65■■□□□ 1.38
LMNA-204ENST00000368298 CRAMP1Q96RY5 1269 aa23.65■■□□□ 1.38
LMNA-204ENST00000368298 BCS1LQ9Y276 419 aa23.65■■□□□ 1.38
LMNA-204ENST00000368298 UTRNP46939 3433 aa23.64■■□□□ 1.38
LMNA-204ENST00000368298 PDE8AO60658 829 aa23.64■■□□□ 1.38
LMNA-204ENST00000368298 ATF7IPQ6VMQ6 1270 aa23.64■■□□□ 1.38
LMNA-204ENST00000368298 UBE3BQ7Z3V4 1068 aa23.64■■□□□ 1.38
LMNA-204ENST00000368298 GOLGB1Q14789 3259 aaKnown RBP23.64■■□□□ 1.38
LMNA-204ENST00000368298 JARID2Q92833 1246 aaPredicted RBP23.63■■□□□ 1.37
LMNA-204ENST00000368298 RPGRQ92834 1020 aaKnown RBP23.63■■□□□ 1.37
LMNA-204ENST00000368298 PLA2G12BQ9BX93 195 aa23.63■■□□□ 1.37
LMNA-204ENST00000368298 UTYO14607 1347 aa23.63■■□□□ 1.37
LMNA-204ENST00000368298 SLX4Q8IY92 1834 aa23.62■■□□□ 1.37
LMNA-204ENST00000368298 GRM8O00222 908 aa23.62■■□□□ 1.37
LMNA-204ENST00000368298 TRIM27P14373 513 aa23.62■■□□□ 1.37
LMNA-204ENST00000368298 CCT4P50991 539 aaKnown RBP23.62■■□□□ 1.37
LMNA-204ENST00000368298 PELP1Q8IZL8 1130 aaKnown RBP23.62■■□□□ 1.37
LMNA-204ENST00000368298 RBM17Q96I25 401 aaKnown RBP23.62■■□□□ 1.37
LMNA-204ENST00000368298 RCAN3Q9UKA8 241 aa23.62■■□□□ 1.37
LMNA-204ENST00000368298 ABCC4O15439 1325 aa23.62■■□□□ 1.37
LMNA-204ENST00000368298 YY1P25490 414 aa23.62■■□□□ 1.37
LMNA-204ENST00000368298 ZKSCAN2Q63HK3 967 aa23.62■■□□□ 1.37
LMNA-204ENST00000368298 PRPF40BQ6NWY9 871 aaKnown RBP23.62■■□□□ 1.37
LMNA-204ENST00000368298 FRAT1Q92837 279 aaPredicted RBP23.62■■□□□ 1.37
LMNA-204ENST00000368298 INTS3Q68E01 1043 aaKnown RBP23.61■■□□□ 1.37
LMNA-204ENST00000368298 C7orf43Q8WVR3 580 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms