RNA–Protein interactions for RNA: ENST00000368209.9

HDGF-203, Transcript of heparin binding growth factor, humanhuman

TSL 2 BASIC

Gene HDGF, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-203ENST00000368209 SMARCC1Q92922 1105 aaPredicted RBP16.45■□□□□ 0.22
HDGF-203ENST00000368209 CCDC87Q9NVE4 849 aa16.45■□□□□ 0.22
HDGF-203ENST00000368209 TRPC5Q9UL62 973 aaPredicted RBP16.45■□□□□ 0.22
HDGF-203ENST00000368209 SASH1O94885 1247 aa16.44■□□□□ 0.22
HDGF-203ENST00000368209 KLHDC4Q8TBB5 520 aa16.44■□□□□ 0.22
HDGF-203ENST00000368209 AOX1Q06278 1338 aa16.44■□□□□ 0.22
HDGF-203ENST00000368209 PTPN12Q05209 780 aaKnown RBP16.44■□□□□ 0.22
HDGF-203ENST00000368209 FAM182BQ5T319 152 aa16.44■□□□□ 0.22
HDGF-203ENST00000368209 ERICH6Q7L0X2 663 aa16.44■□□□□ 0.22
HDGF-203ENST00000368209 COPRSQ9NQ92 184 aa16.44■□□□□ 0.22
HDGF-203ENST00000368209 USP42Q9H9J4 1324 aaKnown RBP16.43■□□□□ 0.22
HDGF-203ENST00000368209 CDC45O75419 566 aa16.43■□□□□ 0.22
HDGF-203ENST00000368209 NUTM1Q86Y26 1132 aa16.43■□□□□ 0.22
HDGF-203ENST00000368209 EP400Q96L91 3159 aa16.43■□□□□ 0.22
HDGF-203ENST00000368209 ERVV-1B6SEH8 477 aa16.43■□□□□ 0.22
HDGF-203ENST00000368209 MFAP1P55081 439 aaKnown RBP16.43■□□□□ 0.22
HDGF-203ENST00000368209 RTL5Q5HYW3 569 aaPredicted RBP16.42■□□□□ 0.22
HDGF-203ENST00000368209 PI4K2BQ8TCG2 481 aa16.42■□□□□ 0.22
HDGF-203ENST00000368209 LMBR1LQ6UX01 489 aa16.41■□□□□ 0.22
HDGF-203ENST00000368209 DZIP3Q86Y13 1208 aaKnown RBP16.41■□□□□ 0.22
HDGF-203ENST00000368209 ERC1Q8IUD2 1116 aa16.41■□□□□ 0.22
HDGF-203ENST00000368209 LINC00116Q8NCU8 138 aa16.41■□□□□ 0.22
HDGF-203ENST00000368209 TBC1D2BQ9UPU7 963 aa16.41■□□□□ 0.22
HDGF-203ENST00000368209 PCCAP05165 728 aaPredicted RBP16.41■□□□□ 0.22
HDGF-203ENST00000368209 NLRP10Q86W26 655 aa16.41■□□□□ 0.22
HDGF-203ENST00000368209 SEPT12Q8IYM1 358 aa16.41■□□□□ 0.22
HDGF-203ENST00000368209 LY75O60449 1722 aa16.4■□□□□ 0.22
HDGF-203ENST00000368209 UBN2Q6ZU65 1347 aa16.4■□□□□ 0.22
HDGF-203ENST00000368209 OS9Q13438 667 aaPredicted RBP16.4■□□□□ 0.22
HDGF-203ENST00000368209 ZBTB38Q8NAP3 1195 aaPredicted RBP16.4■□□□□ 0.22
HDGF-203ENST00000368209 PLA2G12BQ9BX93 195 aa16.4■□□□□ 0.22
HDGF-203ENST00000368209 SIL1Q9H173 461 aa16.4■□□□□ 0.22
HDGF-203ENST00000368209 QTRT2Q9H974 415 aaKnown RBP16.4■□□□□ 0.22
HDGF-203ENST00000368209 BCORQ6W2J9 1755 aa16.39■□□□□ 0.21
HDGF-203ENST00000368209 PRKCSHP14314 528 aaPredicted RBP16.39■□□□□ 0.21
HDGF-203ENST00000368209 G3BP1Q13283 466 aaKnown RBP eCLIP16.39■□□□□ 0.217e-7■■□□□ 12.2
HDGF-203ENST00000368209 HSP90AB3PQ58FF7 597 aa16.39■□□□□ 0.21
HDGF-203ENST00000368209 ZNF34Q8IZ26 560 aa16.39■□□□□ 0.21
HDGF-203ENST00000368209 UPF2Q9HAU5 1272 aaKnown RBP16.39■□□□□ 0.21
HDGF-203ENST00000368209 CAMTA2O94983 1202 aa16.38■□□□□ 0.21
HDGF-203ENST00000368209 GPTP24298 496 aa16.38■□□□□ 0.21
HDGF-203ENST00000368209 KCNQ4P56696 695 aa16.38■□□□□ 0.21
HDGF-203ENST00000368209 SYNE4Q8N205 404 aa16.38■□□□□ 0.21
HDGF-203ENST00000368209 EAF2Q96CJ1 260 aaPredicted RBP16.38■□□□□ 0.21
HDGF-203ENST00000368209 FAM89AQ96GI7 184 aa16.38■□□□□ 0.21
HDGF-203ENST00000368209 C22orf23Q9BZE7 217 aa16.38■□□□□ 0.21
HDGF-203ENST00000368209 CLASRPQ8N2M8 674 aaKnown RBP16.38■□□□□ 0.21
HDGF-203ENST00000368209 ARXQ96QS3 562 aa16.38■□□□□ 0.21
HDGF-203ENST00000368209 BRWD3Q6RI45 1802 aa16.38■□□□□ 0.21
HDGF-203ENST00000368209 CDHR2Q9BYE9 1310 aa16.38■□□□□ 0.21
HDGF-203ENST00000368209 RBM25P49756 843 aaKnown RBP16.37■□□□□ 0.21
HDGF-203ENST00000368209 CNTNAP4Q9C0A0 1308 aa16.37■□□□□ 0.21
HDGF-203ENST00000368209 DDRGK1Q96HY6 314 aa16.37■□□□□ 0.21
HDGF-203ENST00000368209 TAF1LQ8IZX4 1826 aa16.37■□□□□ 0.21
HDGF-203ENST00000368209 TTC41PQ6P2S7 1318 aa16.36■□□□□ 0.21
HDGF-203ENST00000368209 CSF1RP07333 972 aa16.36■□□□□ 0.21
HDGF-203ENST00000368209 ATG9AQ7Z3C6 839 aa16.36■□□□□ 0.21
HDGF-203ENST00000368209 TLR7Q9NYK1 1049 aaKnown RBP16.36■□□□□ 0.21
HDGF-203ENST00000368209 MYH3P11055 1940 aa16.35■□□□□ 0.21
HDGF-203ENST00000368209 AACSQ86V21 672 aa16.35■□□□□ 0.21
HDGF-203ENST00000368209 AK9Q5TCS8 1911 aa16.34■□□□□ 0.21
HDGF-203ENST00000368209 TFCP2Q12800 502 aa16.34■□□□□ 0.21
HDGF-203ENST00000368209 KIF2CQ99661 725 aa16.34■□□□□ 0.21
HDGF-203ENST00000368209 ECHDC1Q9NTX5 307 aa16.34■□□□□ 0.21
HDGF-203ENST00000368209 SCN7AQ01118 1682 aa16.34■□□□□ 0.21
HDGF-203ENST00000368209 RC3H1Q5TC82 1133 aaKnown RBP16.33■□□□□ 0.2
HDGF-203ENST00000368209 IFIT2P09913 472 aaKnown RBP16.33■□□□□ 0.2
HDGF-203ENST00000368209 CHMLP26374 656 aa16.33■□□□□ 0.2
HDGF-203ENST00000368209 ZNF594Q96JF6 807 aaPredicted RBP16.33■□□□□ 0.2
HDGF-203ENST00000368209 CCDC8Q9H0W5 538 aaPredicted RBP16.33■□□□□ 0.2
HDGF-203ENST00000368209 CHMP3Q9Y3E7 222 aa16.33■□□□□ 0.2
HDGF-203ENST00000368209 GLRX3O76003 335 aaKnown RBP16.32■□□□□ 0.2
HDGF-203ENST00000368209 TNNI3KQ59H18 835 aa16.32■□□□□ 0.2
HDGF-203ENST00000368209 SUSD4Q5VX71 490 aa16.32■□□□□ 0.2
HDGF-203ENST00000368209 TTLL11Q8NHH1 800 aa16.32■□□□□ 0.2
HDGF-203ENST00000368209 TRMT112Q9UI30 125 aaKnown RBP16.32■□□□□ 0.2
HDGF-203ENST00000368209 FPGT-TNNI3KV9GXZ4 949 aa16.32■□□□□ 0.2
HDGF-203ENST00000368209 DDX60Q8IY21 1712 aaKnown RBP16.32■□□□□ 0.2
HDGF-203ENST00000368209 LRRC24Q50LG9 513 aa16.31■□□□□ 0.2
HDGF-203ENST00000368209 SMIM5Q71RC9 77 aa16.31■□□□□ 0.2
HDGF-203ENST00000368209 AMIGO3Q86WK7 504 aa16.31■□□□□ 0.2
HDGF-203ENST00000368209 RILPL2Q969X0 211 aa16.31■□□□□ 0.2
HDGF-203ENST00000368209 USP26Q9BXU7 913 aa16.31■□□□□ 0.2
HDGF-203ENST00000368209 BCL11BQ9C0K0 894 aaPredicted RBP16.31■□□□□ 0.2
HDGF-203ENST00000368209 DBNLQ9UJU6 430 aaKnown RBP16.31■□□□□ 0.2
HDGF-203ENST00000368209 TRIM6-TRIM34B2RNG4 842 aa16.31■□□□□ 0.2
HDGF-203ENST00000368209 EYA2O00167 538 aa16.31■□□□□ 0.2
HDGF-203ENST00000368209 IRS4O14654 1257 aaPredicted RBP16.31■□□□□ 0.2
HDGF-203ENST00000368209 CIAO1O76071 339 aa16.31■□□□□ 0.2
HDGF-203ENST00000368209 MAP4K4O95819 1239 aaPredicted RBP16.31■□□□□ 0.2
HDGF-203ENST00000368209 SLC4A3P48751 1232 aa16.31■□□□□ 0.2
HDGF-203ENST00000368209 PUS3Q9BZE2 481 aaKnown RBP16.31■□□□□ 0.2
HDGF-203ENST00000368209 IL25Q9H293 177 aa16.31■□□□□ 0.2
HDGF-203ENST00000368209 LAMB2P55268 1798 aa16.3■□□□□ 0.2
HDGF-203ENST00000368209 CTSWP56202 376 aa16.3■□□□□ 0.2
HDGF-203ENST00000368209 CCNL1Q9UK58 526 aaPredicted RBP16.3■□□□□ 0.2
HDGF-203ENST00000368209 C4BP0C0L5 1744 aa16.3■□□□□ 0.2
HDGF-203ENST00000368209 ESYT1Q9BSJ8 1104 aa16.3■□□□□ 0.2
HDGF-203ENST00000368209 BCL2L12Q9HB09 334 aa16.3■□□□□ 0.2
HDGF-203ENST00000368209 LRP5O75197 1615 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms