RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 NSFL1CQ9UNZ2 370 aaKnown RBP8.15□□□□□ -1.1
SPTA1-201ENST00000368147 KIAA1107Q9UPP5 1409 aa8.15□□□□□ -1.1
SPTA1-201ENST00000368147 ATAD2Q6PL18 1390 aa8.15□□□□□ -1.1
SPTA1-201ENST00000368147 UNC13AQ9UPW8 1703 aa8.15□□□□□ -1.1
SPTA1-201ENST00000368147 LMAN1P49257 510 aa8.15□□□□□ -1.1
SPTA1-201ENST00000368147 CACNA2D4Q7Z3S7 1137 aa8.15□□□□□ -1.11
SPTA1-201ENST00000368147 DNMBPQ6XZF7 1577 aa8.15□□□□□ -1.11
SPTA1-201ENST00000368147 CAMSAP2Q08AD1 1489 aa8.15□□□□□ -1.11
SPTA1-201ENST00000368147 SORBS3O60504 671 aa8.15□□□□□ -1.11
SPTA1-201ENST00000368147 CYP7A1P22680 504 aa8.15□□□□□ -1.11
SPTA1-201ENST00000368147 MCM3P25205 808 aa8.15□□□□□ -1.11
SPTA1-201ENST00000368147 IDI1Q13907 227 aa8.15□□□□□ -1.11
SPTA1-201ENST00000368147 PDCL2Q8N4E4 241 aa8.15□□□□□ -1.11
SPTA1-201ENST00000368147 PRC1O43663 620 aa8.14□□□□□ -1.11
SPTA1-201ENST00000368147 ZNF397Q8NF99 534 aaPredicted RBP8.14□□□□□ -1.11
SPTA1-201ENST00000368147 DZIP3Q86Y13 1208 aaKnown RBP8.14□□□□□ -1.11
SPTA1-201ENST00000368147 TIGD1Q96MW7 591 aa8.14□□□□□ -1.11
SPTA1-201ENST00000368147 SYNCQ9H7C4 482 aa8.14□□□□□ -1.11
SPTA1-201ENST00000368147 CPSF2Q9P2I0 782 aaKnown RBP8.14□□□□□ -1.11
SPTA1-201ENST00000368147 ANKRD30BQ9BXX2 1392 aa8.14□□□□□ -1.11
SPTA1-201ENST00000368147 ARL1P40616 181 aaPredicted RBP8.14□□□□□ -1.11
SPTA1-201ENST00000368147 PDE4BQ07343 736 aa8.14□□□□□ -1.11
SPTA1-201ENST00000368147 C6orf163Q5TEZ5 329 aa8.14□□□□□ -1.11
SPTA1-201ENST00000368147 JAKMIP3Q5VZ66 844 aa8.14□□□□□ -1.11
SPTA1-201ENST00000368147 STAC3Q96MF2 364 aa8.14□□□□□ -1.11
SPTA1-201ENST00000368147 CALCOCO1Q9P1Z2 691 aa8.14□□□□□ -1.11
SPTA1-201ENST00000368147 PCF11O94913 1555 aaKnown RBP8.14□□□□□ -1.11
SPTA1-201ENST00000368147 ATXN8OSP0DMR3 200 aa8.14□□□□□ -1.11
SPTA1-201ENST00000368147 CFAP45Q9UL16 551 aa8.14□□□□□ -1.11
SPTA1-201ENST00000368147 CCDC194A0A1B0GVG4 234 aa8.14□□□□□ -1.11
SPTA1-201ENST00000368147 GIGYF2Q6Y7W6 1299 aaKnown RBP8.14□□□□□ -1.11
SPTA1-201ENST00000368147 ARHGAP27Q6ZUM4 889 aa8.14□□□□□ -1.11
SPTA1-201ENST00000368147 AEBP1Q8IUX7 1158 aa8.14□□□□□ -1.11
SPTA1-201ENST00000368147 NLRP3Q96P20 1036 aa8.14□□□□□ -1.11
SPTA1-201ENST00000368147 NAP1L3Q99457 506 aaPredicted RBP8.14□□□□□ -1.11
SPTA1-201ENST00000368147 FANCAO15360 1455 aa8.14□□□□□ -1.11
SPTA1-201ENST00000368147 PRKCSHP14314 528 aaPredicted RBP8.14□□□□□ -1.11
SPTA1-201ENST00000368147 MVPQ14764 893 aaKnown RBP8.14□□□□□ -1.11
SPTA1-201ENST00000368147 TRAPPC3LQ5T215 181 aa8.14□□□□□ -1.11
SPTA1-201ENST00000368147 ZNF804AQ7Z570 1209 aa8.14□□□□□ -1.11
SPTA1-201ENST00000368147 FAM114A2Q9NRY5 505 aa8.14□□□□□ -1.11
SPTA1-201ENST00000368147 CHPF2Q9P2E5 772 aa8.14□□□□□ -1.11
SPTA1-201ENST00000368147 MICU3Q86XE3 530 aa8.13□□□□□ -1.11
SPTA1-201ENST00000368147 KIF1BPQ96EK5 621 aa8.13□□□□□ -1.11
SPTA1-201ENST00000368147 NOL3O60936 208 aaKnown RBP8.13□□□□□ -1.11
SPTA1-201ENST00000368147 TICAM2Q86XR7 235 aa8.13□□□□□ -1.11
SPTA1-201ENST00000368147 OTUD6BQ8N6M0 293 aa8.13□□□□□ -1.11
SPTA1-201ENST00000368147 USP21Q9UK80 565 aa8.13□□□□□ -1.11
SPTA1-201ENST00000368147 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.13□□□□□ -1.11
SPTA1-201ENST00000368147 CPLX3Q8WVH0 158 aa8.13□□□□□ -1.11
SPTA1-201ENST00000368147 DNAAF4Q8WXU2 420 aa8.13□□□□□ -1.11
SPTA1-201ENST00000368147 SLC26A6Q9BXS9 759 aa8.13□□□□□ -1.11
SPTA1-201ENST00000368147 FCHSD2O94868 740 aa8.13□□□□□ -1.11
SPTA1-201ENST00000368147 MFSD6Q6ZSS7 791 aa8.13□□□□□ -1.11
SPTA1-201ENST00000368147 UTP14AQ9BVJ6 771 aaKnown RBP8.13□□□□□ -1.11
SPTA1-201ENST00000368147 CRNKL1Q9BZJ0 848 aaKnown RBP8.13□□□□□ -1.11
SPTA1-201ENST00000368147 ZC3H12CQ9C0D7 883 aaKnown RBP8.13□□□□□ -1.11
SPTA1-201ENST00000368147 FAM184BQ9ULE4 1060 aa8.13□□□□□ -1.11
SPTA1-201ENST00000368147 SLC4A4Q9Y6R1 1079 aa8.13□□□□□ -1.11
SPTA1-201ENST00000368147 NOS1P29475 1434 aa8.13□□□□□ -1.11
SPTA1-201ENST00000368147 ADGRF5Q8IZF2 1346 aa8.13□□□□□ -1.11
SPTA1-201ENST00000368147 EIF6P56537 245 aaKnown RBP8.13□□□□□ -1.11
SPTA1-201ENST00000368147 FNBP4Q8N3X1 1017 aaPredicted RBP8.13□□□□□ -1.11
SPTA1-201ENST00000368147 MIGA1Q8NAN2 632 aa8.13□□□□□ -1.11
SPTA1-201ENST00000368147 SMC6Q96SB8 1091 aa8.13□□□□□ -1.11
SPTA1-201ENST00000368147 NOD1Q9Y239 953 aa8.13□□□□□ -1.11
SPTA1-201ENST00000368147 MAGI1Q96QZ7 1491 aaPredicted RBP8.13□□□□□ -1.11
SPTA1-201ENST00000368147 GSTO1P78417 241 aa8.13□□□□□ -1.11
SPTA1-201ENST00000368147 BRD4O60885 1362 aaPredicted RBP8.13□□□□□ -1.11
SPTA1-201ENST00000368147 TNRQ92752 1358 aa8.13□□□□□ -1.11
SPTA1-201ENST00000368147 RRP9O43818 475 aaKnown RBP8.12□□□□□ -1.11
SPTA1-201ENST00000368147 KRT85P78386 507 aa8.12□□□□□ -1.11
SPTA1-201ENST00000368147 NFATC2IPQ8NCF5 419 aa8.12□□□□□ -1.11
SPTA1-201ENST00000368147 SBNO2Q9Y2G9 1366 aa8.12□□□□□ -1.11
SPTA1-201ENST00000368147 PHACTR2O75167 634 aa8.12□□□□□ -1.11
SPTA1-201ENST00000368147 PICK1Q9NRD5 415 aa8.12□□□□□ -1.11
SPTA1-201ENST00000368147 MAP9Q49MG5 647 aa8.12□□□□□ -1.11
SPTA1-201ENST00000368147 GINS2Q9Y248 185 aa8.12□□□□□ -1.11
SPTA1-201ENST00000368147 IFIT1BQ5T764 474 aaKnown RBP8.12□□□□□ -1.11
SPTA1-201ENST00000368147 C8orf76Q96K31 380 aa8.12□□□□□ -1.11
SPTA1-201ENST00000368147 TROQ12816 1431 aaPredicted RBP8.12□□□□□ -1.11
SPTA1-201ENST00000368147 PRPF4BQ13523 1007 aaKnown RBP8.12□□□□□ -1.11
SPTA1-201ENST00000368147 BCS1LQ9Y276 419 aa8.12□□□□□ -1.11
SPTA1-201ENST00000368147 PABPN1LA6NDY0 278 aaKnown RBP8.12□□□□□ -1.11
SPTA1-201ENST00000368147 GJC1P36383 396 aa8.12□□□□□ -1.11
SPTA1-201ENST00000368147 MAP3K7CLP57077 242 aa8.12□□□□□ -1.11
SPTA1-201ENST00000368147 LRRC2Q9BYS8 371 aa8.12□□□□□ -1.11
SPTA1-201ENST00000368147 ABCC5O15440 1437 aa8.12□□□□□ -1.11
SPTA1-201ENST00000368147 TMEM110-MUSTN1A8MSY1 372 aa8.12□□□□□ -1.11
SPTA1-201ENST00000368147 UBE4AQ14139 1066 aa8.12□□□□□ -1.11
SPTA1-201ENST00000368147 RBM17Q96I25 401 aaKnown RBP8.12□□□□□ -1.11
SPTA1-201ENST00000368147 SERPINA10Q9UK55 444 aa8.12□□□□□ -1.11
SPTA1-201ENST00000368147 TRAK2O60296 914 aa8.11□□□□□ -1.11
SPTA1-201ENST00000368147 IDEP14735 1019 aa8.11□□□□□ -1.11
SPTA1-201ENST00000368147 TCP10Q12799 353 aa8.11□□□□□ -1.11
SPTA1-201ENST00000368147 CCDC174Q6PII3 467 aa8.11□□□□□ -1.11
SPTA1-201ENST00000368147 TAF4BQ92750 862 aa8.11□□□□□ -1.11
SPTA1-201ENST00000368147 ZRANB1Q9UGI0 708 aa8.11□□□□□ -1.11
SPTA1-201ENST00000368147 DENND4BO75064 1496 aaPredicted RBP8.11□□□□□ -1.11
SPTA1-201ENST00000368147 CFAP100Q494V2 611 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms