RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 HYPKQ9NX55 129 aa12.75□□□□□ -0.37
CD48-202ENST00000368046 CHPF2Q9P2E5 772 aa12.75□□□□□ -0.37
CD48-202ENST00000368046 GTF2E1P29083 439 aaPredicted RBP12.74□□□□□ -0.37
CD48-202ENST00000368046 MAMSTRQ6ZN01 415 aa12.74□□□□□ -0.37
CD48-202ENST00000368046 ANKRD13DQ6ZTN6 518 aa12.74□□□□□ -0.37
CD48-202ENST00000368046 C2CD5Q86YS7 1000 aa12.74□□□□□ -0.37
CD48-202ENST00000368046 TSR2Q969E8 191 aaKnown RBP12.74□□□□□ -0.37
CD48-202ENST00000368046 FAM177BA6PVY3 158 aa12.73□□□□□ -0.37
CD48-202ENST00000368046 C7P10643 843 aa12.73□□□□□ -0.37
CD48-202ENST00000368046 HSP90AB3PQ58FF7 597 aa12.73□□□□□ -0.37
CD48-202ENST00000368046 CCDC30Q5VVM6 783 aa12.73□□□□□ -0.37
CD48-202ENST00000368046 ASTLQ6HA08 431 aaPredicted RBP12.73□□□□□ -0.37
CD48-202ENST00000368046 TTLL6Q8N841 843 aa12.73□□□□□ -0.37
CD48-202ENST00000368046 SLC39A7Q92504 469 aa12.73□□□□□ -0.37
CD48-202ENST00000368046 FAM163AQ96GL9 167 aaPredicted RBP12.73□□□□□ -0.37
CD48-202ENST00000368046 NYXQ9GZU5 481 aa12.73□□□□□ -0.37
CD48-202ENST00000368046 GOLGB1Q14789 3259 aaKnown RBP12.72□□□□□ -0.37
CD48-202ENST00000368046 KLRG2A4D1S0 409 aaPredicted RBP12.72□□□□□ -0.37
CD48-202ENST00000368046 GPTP24298 496 aa12.72□□□□□ -0.37
CD48-202ENST00000368046 PARP10Q53GL7 1025 aa12.72□□□□□ -0.37
CD48-202ENST00000368046 LCE2DQ5TA82 110 aaPredicted RBP12.72□□□□□ -0.37
CD48-202ENST00000368046 SUSD4Q5VX71 490 aa12.72□□□□□ -0.37
CD48-202ENST00000368046 DIEXFQ68CQ4 756 aaKnown RBP12.72□□□□□ -0.37
CD48-202ENST00000368046 ARHGAP27Q6ZUM4 889 aa12.72□□□□□ -0.37
CD48-202ENST00000368046 PPP1R42Q7Z4L9 355 aa12.72□□□□□ -0.37
CD48-202ENST00000368046 TSPYL6Q8N831 410 aa12.72□□□□□ -0.37
CD48-202ENST00000368046 PLBD2Q8NHP8 589 aa12.72□□□□□ -0.37
CD48-202ENST00000368046 KIF13BQ9NQT8 1826 aa12.72□□□□□ -0.37
CD48-202ENST00000368046 SRGNP10124 158 aa12.71□□□□□ -0.37
CD48-202ENST00000368046 GOLGA2Q08379 1002 aa12.71□□□□□ -0.37
CD48-202ENST00000368046 TCIRG1Q13488 830 aa12.71□□□□□ -0.37
CD48-202ENST00000368046 TWISTNBQ3B726 338 aaPredicted RBP12.71□□□□□ -0.37
CD48-202ENST00000368046 ZNF622Q969S3 477 aaKnown RBP eCLIP12.71□□□□□ -0.37
CD48-202ENST00000368046 LAMB4A4D0S4 1761 aa12.71□□□□□ -0.38
CD48-202ENST00000368046 NRXN2Q9P2S2 1712 aa12.71□□□□□ -0.38
CD48-202ENST00000368046 ATP10DQ9P241 1426 aa12.71□□□□□ -0.38
CD48-202ENST00000368046 STYK1Q6J9G0 422 aa12.7□□□□□ -0.38
CD48-202ENST00000368046 MASTLQ96GX5 879 aa12.7□□□□□ -0.38
CD48-202ENST00000368046 PHAXQ9H814 394 aaKnown RBP12.7□□□□□ -0.38
CD48-202ENST00000368046 SCN7AQ01118 1682 aa12.7□□□□□ -0.38
CD48-202ENST00000368046 UBN2Q6ZU65 1347 aa12.69□□□□□ -0.38
CD48-202ENST00000368046 ATMINO43313 823 aaPredicted RBP12.69□□□□□ -0.38
CD48-202ENST00000368046 ALDH1B1P30837 517 aa12.69□□□□□ -0.38
CD48-202ENST00000368046 ERFEQ4G0M1 354 aa12.69□□□□□ -0.38
CD48-202ENST00000368046 SLC10A5Q5PT55 438 aa12.69□□□□□ -0.38
CD48-202ENST00000368046 NUTM1Q86Y26 1132 aa12.69□□□□□ -0.38
CD48-202ENST00000368046 CNKSR1Q969H4 720 aa12.69□□□□□ -0.38
CD48-202ENST00000368046 UTP14AQ9BVJ6 771 aaKnown RBP12.69□□□□□ -0.38
CD48-202ENST00000368046 MYH16Q9H6N6 1097 aa12.69□□□□□ -0.38
CD48-202ENST00000368046 FANCIQ9NVI1 1328 aa12.68□□□□□ -0.38
CD48-202ENST00000368046 VAMP4O75379 141 aa12.68□□□□□ -0.38
CD48-202ENST00000368046 NTSR2O95665 410 aa12.68□□□□□ -0.38
CD48-202ENST00000368046 NPR1P16066 1061 aa12.68□□□□□ -0.38
CD48-202ENST00000368046 EXOSC9Q06265 439 aaKnown RBP12.68□□□□□ -0.38
CD48-202ENST00000368046 TRIM28Q13263 835 aaKnown RBP12.68□□□□□ -0.38
CD48-202ENST00000368046 RIC3Q7Z5B4 369 aa12.68□□□□□ -0.38
CD48-202ENST00000368046 NLRP10Q86W26 655 aa12.68□□□□□ -0.38
CD48-202ENST00000368046 ZNF784Q8NCA9 323 aaPredicted RBP12.68□□□□□ -0.38
CD48-202ENST00000368046 MS4A3Q96HJ5 214 aa12.68□□□□□ -0.38
CD48-202ENST00000368046 STK31Q9BXU1 1019 aa12.68□□□□□ -0.38
CD48-202ENST00000368046 N4BP2Q86UW6 1770 aaPredicted RBP12.68□□□□□ -0.38
CD48-202ENST00000368046 KIAA1551Q9HCM1 1747 aa12.68□□□□□ -0.38
CD48-202ENST00000368046 AFDNP55196 1824 aaKnown RBP12.67□□□□□ -0.38
CD48-202ENST00000368046 ZNF521Q96K83 1311 aa12.67□□□□□ -0.38
CD48-202ENST00000368046 DDX58O95786 925 aaKnown RBP12.67□□□□□ -0.38
CD48-202ENST00000368046 MIER1Q8N108 512 aa12.67□□□□□ -0.38
CD48-202ENST00000368046 NLRP3Q96P20 1036 aa12.67□□□□□ -0.38
CD48-202ENST00000368046 ISCA1Q9BUE6 129 aa12.67□□□□□ -0.38
CD48-202ENST00000368046 TRMT112Q9UI30 125 aaKnown RBP12.67□□□□□ -0.38
CD48-202ENST00000368046 IBTKQ9P2D0 1353 aaPredicted RBP12.67□□□□□ -0.38
CD48-202ENST00000368046 BCORQ6W2J9 1755 aa12.66□□□□□ -0.38
CD48-202ENST00000368046 RNF123Q5XPI4 1314 aa12.66□□□□□ -0.38
CD48-202ENST00000368046 CRY2Q49AN0 593 aa12.66□□□□□ -0.38
CD48-202ENST00000368046 ATP5J2-PTCD1G3V325 749 aa12.65□□□□□ -0.38
CD48-202ENST00000368046 TCERG1O14776 1098 aaKnown RBP12.65□□□□□ -0.38
CD48-202ENST00000368046 C21orf2O43822 256 aa12.65□□□□□ -0.38
CD48-202ENST00000368046 KSR2Q6VAB6 950 aa12.65□□□□□ -0.38
CD48-202ENST00000368046 HOXA10P31260 410 aaPredicted RBP12.64□□□□□ -0.39
CD48-202ENST00000368046 PRPF40BQ6NWY9 871 aaKnown RBP12.64□□□□□ -0.39
CD48-202ENST00000368046 C7orf43Q8WVR3 580 aa12.64□□□□□ -0.39
CD48-202ENST00000368046 METTL22Q9BUU2 404 aaPredicted RBP12.64□□□□□ -0.39
CD48-202ENST00000368046 SCUBE2Q9NQ36 999 aa12.64□□□□□ -0.39
CD48-202ENST00000368046 PI4KAP2A4QPH2 592 aa12.63□□□□□ -0.39
CD48-202ENST00000368046 E9PSI1 815 aa12.63□□□□□ -0.39
CD48-202ENST00000368046 SLFN5Q08AF3 891 aa12.63□□□□□ -0.39
CD48-202ENST00000368046 SOGA3Q5TF21 947 aa12.63□□□□□ -0.39
CD48-202ENST00000368046 C9orf131Q5VYM1 1079 aa12.63□□□□□ -0.39
CD48-202ENST00000368046 G2E3Q7L622 706 aa12.63□□□□□ -0.39
CD48-202ENST00000368046 SYNE4Q8N205 404 aa12.63□□□□□ -0.39
CD48-202ENST00000368046 PI4KAP1Q8N8J0 262 aa12.63□□□□□ -0.39
CD48-202ENST00000368046 RPGRQ92834 1020 aaKnown RBP12.63□□□□□ -0.39
CD48-202ENST00000368046 RBM17Q96I25 401 aaKnown RBP12.63□□□□□ -0.39
CD48-202ENST00000368046 CRAMP1Q96RY5 1269 aa12.63□□□□□ -0.39
CD48-202ENST00000368046 MYD88Q99836 296 aa12.63□□□□□ -0.39
CD48-202ENST00000368046 SH3TC1Q8TE82 1336 aa12.62□□□□□ -0.39
CD48-202ENST00000368046 RIC1Q4ADV7 1423 aa12.62□□□□□ -0.39
CD48-202ENST00000368046 NUP98P52948 1817 aa12.62□□□□□ -0.39
CD48-202ENST00000368046 ABCC12Q96J65 1359 aa12.62□□□□□ -0.39
CD48-202ENST00000368046 HCLS1P14317 486 aaPredicted RBP12.62□□□□□ -0.39
CD48-202ENST00000368046 LMNB1P20700 586 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms