RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 COPS6Q7L5N1 327 aa18.97■□□□□ 0.63
SF3B5-201ENST00000367569 UBN2Q6ZU65 1347 aa18.97■□□□□ 0.63
SF3B5-201ENST00000367569 LAMB2P55268 1798 aa18.96■□□□□ 0.63
SF3B5-201ENST00000367569 ABCC12Q96J65 1359 aa18.96■□□□□ 0.63
SF3B5-201ENST00000367569 POTECB2RU33 542 aa18.96■□□□□ 0.63
SF3B5-201ENST00000367569 ERFEQ4G0M1 354 aa18.96■□□□□ 0.63
SF3B5-201ENST00000367569 TPTE2Q6XPS3 522 aa18.96■□□□□ 0.63
SF3B5-201ENST00000367569 SMC1BQ8NDV3 1235 aa18.96■□□□□ 0.63
SF3B5-201ENST00000367569 TAOK3Q9H2K8 898 aa18.96■□□□□ 0.63
SF3B5-201ENST00000367569 DDX21Q9NR30 783 aaKnown RBP eCLIP18.96■□□□□ 0.63
SF3B5-201ENST00000367569 LTBP3Q9NS15 1303 aa18.96■□□□□ 0.63
SF3B5-201ENST00000367569 KLRG2A4D1S0 409 aaPredicted RBP18.95■□□□□ 0.62
SF3B5-201ENST00000367569 HOXB7P09629 217 aa18.95■□□□□ 0.62
SF3B5-201ENST00000367569 C7orf43Q8WVR3 580 aa18.95■□□□□ 0.62
SF3B5-201ENST00000367569 IL16Q14005 1332 aa18.95■□□□□ 0.62
SF3B5-201ENST00000367569 NPR1P16066 1061 aa18.94■□□□□ 0.62
SF3B5-201ENST00000367569 DPY19L2Q6NUT2 758 aa18.94■□□□□ 0.62
SF3B5-201ENST00000367569 NUTM1Q86Y26 1132 aa18.94■□□□□ 0.62
SF3B5-201ENST00000367569 PHAXQ9H814 394 aaKnown RBP18.94■□□□□ 0.62
SF3B5-201ENST00000367569 TWISTNBQ3B726 338 aaPredicted RBP18.93■□□□□ 0.62
SF3B5-201ENST00000367569 IFFO2Q5TF58 517 aa18.93■□□□□ 0.62
SF3B5-201ENST00000367569 ERVV-1B6SEH8 477 aa18.92■□□□□ 0.62
SF3B5-201ENST00000367569 EXOSC9Q06265 439 aaKnown RBP18.92■□□□□ 0.62
SF3B5-201ENST00000367569 SOGA3Q5TF21 947 aa18.92■□□□□ 0.62
SF3B5-201ENST00000367569 GIGYF2Q6Y7W6 1299 aaKnown RBP18.92■□□□□ 0.62
SF3B5-201ENST00000367569 WDR63Q8IWG1 891 aa18.92■□□□□ 0.62
SF3B5-201ENST00000367569 DBF4Q9UBU7 674 aaPredicted RBP18.92■□□□□ 0.62
SF3B5-201ENST00000367569 DDX60Q8IY21 1712 aaKnown RBP18.91■□□□□ 0.62
SF3B5-201ENST00000367569 OLFM4Q6UX06 510 aa18.91■□□□□ 0.62
SF3B5-201ENST00000367569 KLRG1Q96E93 195 aa18.91■□□□□ 0.62
SF3B5-201ENST00000367569 ZNF521Q96K83 1311 aa18.91■□□□□ 0.62
SF3B5-201ENST00000367569 GTF2E1P29083 439 aaPredicted RBP18.9■□□□□ 0.62
SF3B5-201ENST00000367569 SUSD4Q5VX71 490 aa18.9■□□□□ 0.62
SF3B5-201ENST00000367569 DDNO94850 711 aaPredicted RBP18.89■□□□□ 0.61
SF3B5-201ENST00000367569 CCDC93Q567U6 631 aa18.89■□□□□ 0.61
SF3B5-201ENST00000367569 NCBP3Q53F19 620 aaKnown RBP18.88■□□□□ 0.61
SF3B5-201ENST00000367569 ZNF34Q8IZ26 560 aa18.88■□□□□ 0.61
SF3B5-201ENST00000367569 HYPKQ9NX55 129 aa18.88■□□□□ 0.61
SF3B5-201ENST00000367569 ATP5J2-PTCD1G3V325 749 aa18.87■□□□□ 0.61
SF3B5-201ENST00000367569 NTSR2O95665 410 aa18.87■□□□□ 0.61
SF3B5-201ENST00000367569 TAF1P21675 1872 aa18.87■□□□□ 0.61
SF3B5-201ENST00000367569 GOLGA2Q08379 1002 aa18.87■□□□□ 0.61
SF3B5-201ENST00000367569 CCDC30Q5VVM6 783 aa18.87■□□□□ 0.61
SF3B5-201ENST00000367569 G2E3Q7L622 706 aa18.87■□□□□ 0.61
SF3B5-201ENST00000367569 NYXQ9GZU5 481 aa18.87■□□□□ 0.61
SF3B5-201ENST00000367569 PCNTO95613 3336 aa18.86■□□□□ 0.61
SF3B5-201ENST00000367569 ALDH1B1P30837 517 aa18.86■□□□□ 0.61
SF3B5-201ENST00000367569 FKBP4Q02790 459 aaKnown RBP eCLIP18.86■□□□□ 0.61
SF3B5-201ENST00000367569 CRY2Q49AN0 593 aa18.86■□□□□ 0.61
SF3B5-201ENST00000367569 C3orf67Q6ZVT6 689 aa18.86■□□□□ 0.61
SF3B5-201ENST00000367569 JMYQ8N9B5 988 aa18.86■□□□□ 0.61
SF3B5-201ENST00000367569 PLBD2Q8NHP8 589 aa18.86■□□□□ 0.61
SF3B5-201ENST00000367569 CDCA7LQ96GN5 454 aa18.86■□□□□ 0.61
SF3B5-201ENST00000367569 MYH16Q9H6N6 1097 aa18.86■□□□□ 0.61
SF3B5-201ENST00000367569 ZNF277Q9NRM2 450 aaPredicted RBP18.86■□□□□ 0.61
SF3B5-201ENST00000367569 IBTKQ9P2D0 1353 aaPredicted RBP18.85■□□□□ 0.61
SF3B5-201ENST00000367569 CACNA1FO60840 1977 aa18.85■□□□□ 0.61
SF3B5-201ENST00000367569 RTL5Q5HYW3 569 aaPredicted RBP18.85■□□□□ 0.61
SF3B5-201ENST00000367569 ANKRD13DQ6ZTN6 518 aa18.85■□□□□ 0.61
SF3B5-201ENST00000367569 RIC3Q7Z5B4 369 aa18.85■□□□□ 0.61
SF3B5-201ENST00000367569 SLC51AQ86UW1 340 aa18.85■□□□□ 0.61
SF3B5-201ENST00000367569 NLRP10Q86W26 655 aa18.85■□□□□ 0.61
SF3B5-201ENST00000367569 SYNE4Q8N205 404 aa18.85■□□□□ 0.61
SF3B5-201ENST00000367569 STK31Q9BXU1 1019 aa18.85■□□□□ 0.61
SF3B5-201ENST00000367569 POTEIP0CG38 1075 aa18.84■□□□□ 0.61
SF3B5-201ENST00000367569 POTEJP0CG39 1038 aa18.84■□□□□ 0.61
SF3B5-201ENST00000367569 RTKN2Q8IZC4 609 aa18.84■□□□□ 0.61
SF3B5-201ENST00000367569 MYD88Q99836 296 aa18.84■□□□□ 0.61
SF3B5-201ENST00000367569 TCIRG1Q13488 830 aa18.83■□□□□ 0.6
SF3B5-201ENST00000367569 COL4A1P02462 1669 aa18.82■□□□□ 0.6
SF3B5-201ENST00000367569 ZNF541Q9H0D2 1346 aa18.82■□□□□ 0.6
SF3B5-201ENST00000367569 VAMP4O75379 141 aa18.82■□□□□ 0.6
SF3B5-201ENST00000367569 PARP10Q53GL7 1025 aa18.82■□□□□ 0.6
SF3B5-201ENST00000367569 HSP90AB3PQ58FF7 597 aa18.82■□□□□ 0.6
SF3B5-201ENST00000367569 UTP14AQ9BVJ6 771 aaKnown RBP18.82■□□□□ 0.6
SF3B5-201ENST00000367569 SNED1Q8TER0 1413 aa18.82■□□□□ 0.6
SF3B5-201ENST00000367569 SPEF2Q9C093 1822 aa18.81■□□□□ 0.6
SF3B5-201ENST00000367569 SLC4A2P04920 1241 aa18.81■□□□□ 0.6
SF3B5-201ENST00000367569 HCLS1P14317 486 aaPredicted RBP18.81■□□□□ 0.6
SF3B5-201ENST00000367569 HOXA10P31260 410 aaPredicted RBP18.81■□□□□ 0.6
SF3B5-201ENST00000367569 CHADLQ6NUI6 762 aa18.81■□□□□ 0.6
SF3B5-201ENST00000367569 PPP1R42Q7Z4L9 355 aa18.81■□□□□ 0.6
SF3B5-201ENST00000367569 JARID2Q92833 1246 aaPredicted RBP18.81■□□□□ 0.6
SF3B5-201ENST00000367569 L3MBTL3Q96JM7 780 aaPredicted RBP18.81■□□□□ 0.6
SF3B5-201ENST00000367569 TRMT112Q9UI30 125 aaKnown RBP18.81■□□□□ 0.6
SF3B5-201ENST00000367569 MAP3K2Q9Y2U5 619 aa18.81■□□□□ 0.6
SF3B5-201ENST00000367569 RIC1Q4ADV7 1423 aa18.81■□□□□ 0.6
SF3B5-201ENST00000367569 SCN4AP35499 1836 aa18.8■□□□□ 0.6
SF3B5-201ENST00000367569 IARSP41252 1262 aaKnown RBP18.8■□□□□ 0.6
SF3B5-201ENST00000367569 RPGRQ92834 1020 aaKnown RBP18.8■□□□□ 0.6
SF3B5-201ENST00000367569 IQCA1LA6NCM1 817 aa18.79■□□□□ 0.6
SF3B5-201ENST00000367569 HNRNPUQ00839 825 aaKnown RBP eCLIP18.79■□□□□ 0.6
SF3B5-201ENST00000367569 PSMD1Q99460 953 aa18.79■□□□□ 0.6
SF3B5-201ENST00000367569 ISCA1Q9BUE6 129 aa18.79■□□□□ 0.6
SF3B5-201ENST00000367569 TAF1DQ9H5J8 278 aaPredicted RBP18.79■□□□□ 0.6
SF3B5-201ENST00000367569 PI4KAP2A4QPH2 592 aa18.78■□□□□ 0.6
SF3B5-201ENST00000367569 E9PSI1 815 aa18.78■□□□□ 0.6
SF3B5-201ENST00000367569 FZD9O00144 591 aa18.78■□□□□ 0.6
SF3B5-201ENST00000367569 SLFN5Q08AF3 891 aa18.78■□□□□ 0.6
SF3B5-201ENST00000367569 FLIIQ13045 1269 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms