RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 EZRP15311 586 aaKnown RBP10.43□□□□□ -0.74
SYNE1-205ENST00000367251 MPRIPQ6WCQ1 1025 aa10.43□□□□□ -0.74
SYNE1-205ENST00000367251 A0A087WZG4 1122 aa10.43□□□□□ -0.74
SYNE1-205ENST00000367251 AXDND1Q5T1B0 1012 aaPredicted RBP10.43□□□□□ -0.74
SYNE1-205ENST00000367251 PPP4R3AQ6IN85 833 aa10.43□□□□□ -0.74
SYNE1-205ENST00000367251 CCDC191Q8NCU4 936 aa10.43□□□□□ -0.74
SYNE1-205ENST00000367251 H0YHG0 523 aa10.43□□□□□ -0.74
SYNE1-205ENST00000367251 ADCY5O95622 1261 aa10.43□□□□□ -0.74
SYNE1-205ENST00000367251 NOP2P46087 812 aaKnown RBP10.43□□□□□ -0.74
SYNE1-205ENST00000367251 ZC3H6P61129 1189 aaKnown RBP10.43□□□□□ -0.74
SYNE1-205ENST00000367251 MAP9Q49MG5 647 aa10.43□□□□□ -0.74
SYNE1-205ENST00000367251 AKAP4Q5JQC9 854 aa10.43□□□□□ -0.74
SYNE1-205ENST00000367251 AOX1Q06278 1338 aa10.43□□□□□ -0.74
SYNE1-205ENST00000367251 CCDC171Q6TFL3 1326 aa10.43□□□□□ -0.74
SYNE1-205ENST00000367251 KIF5CO60282 957 aa10.43□□□□□ -0.74
SYNE1-205ENST00000367251 UQCRFS1P1P0C7P4 283 aa10.43□□□□□ -0.74
SYNE1-205ENST00000367251 CASQ1P31415 396 aa10.43□□□□□ -0.74
SYNE1-205ENST00000367251 FSIP1Q8NA03 581 aa10.43□□□□□ -0.74
SYNE1-205ENST00000367251 USP25Q9UHP3 1055 aa10.43□□□□□ -0.74
SYNE1-205ENST00000367251 ATP7AQ04656 1500 aa10.42□□□□□ -0.74
SYNE1-205ENST00000367251 FAM83GA6ND36 823 aa10.42□□□□□ -0.74
SYNE1-205ENST00000367251 RBM25P49756 843 aaKnown RBP10.42□□□□□ -0.74
SYNE1-205ENST00000367251 TTC16Q8NEE8 873 aa10.42□□□□□ -0.74
SYNE1-205ENST00000367251 NCOA7Q8NI08 942 aa10.42□□□□□ -0.74
SYNE1-205ENST00000367251 PI4KAP2A4QPH2 592 aa10.42□□□□□ -0.74
SYNE1-205ENST00000367251 IQCA1Q86XH1 822 aa10.42□□□□□ -0.74
SYNE1-205ENST00000367251 PI4KAP1Q8N8J0 262 aa10.42□□□□□ -0.74
SYNE1-205ENST00000367251 CTCFLQ8NI51 663 aaPredicted RBP10.42□□□□□ -0.74
SYNE1-205ENST00000367251 MEIS3Q99687 375 aa10.42□□□□□ -0.74
SYNE1-205ENST00000367251 CARD14Q9BXL6 1004 aa10.42□□□□□ -0.74
SYNE1-205ENST00000367251 COMMD10Q9Y6G5 202 aa10.42□□□□□ -0.74
SYNE1-205ENST00000367251 A0A1W2PP64 1363 aa10.42□□□□□ -0.74
SYNE1-205ENST00000367251 EIF5P55010 431 aaKnown RBP10.42□□□□□ -0.74
SYNE1-205ENST00000367251 TANGO6Q9C0B7 1094 aa10.42□□□□□ -0.74
SYNE1-205ENST00000367251 GOLGA8AA7E2F4 631 aa10.42□□□□□ -0.74
SYNE1-205ENST00000367251 GOLGA8BA8MQT2 603 aa10.42□□□□□ -0.74
SYNE1-205ENST00000367251 BMP15O95972 392 aa10.42□□□□□ -0.74
SYNE1-205ENST00000367251 CEP85Q6P2H3 762 aa10.42□□□□□ -0.74
SYNE1-205ENST00000367251 YTHDC2Q9H6S0 1430 aaKnown RBP10.42□□□□□ -0.74
SYNE1-205ENST00000367251 KIF20AO95235 890 aa10.41□□□□□ -0.74
SYNE1-205ENST00000367251 EIF4A2Q14240 407 aaKnown RBP10.41□□□□□ -0.74
SYNE1-205ENST00000367251 FKBP15Q5T1M5 1219 aa10.41□□□□□ -0.74
SYNE1-205ENST00000367251 KSR2Q6VAB6 950 aa10.41□□□□□ -0.74
SYNE1-205ENST00000367251 KIAA1328Q86T90 577 aa10.41□□□□□ -0.74
SYNE1-205ENST00000367251 CRACR2BQ8N4Y2 399 aaPredicted RBP10.41□□□□□ -0.74
SYNE1-205ENST00000367251 C8orf58Q8NAV2 365 aa10.41□□□□□ -0.74
SYNE1-205ENST00000367251 PSMD1Q99460 953 aa10.41□□□□□ -0.74
SYNE1-205ENST00000367251 RAB34Q9BZG1 259 aa10.41□□□□□ -0.74
SYNE1-205ENST00000367251 BCL11BQ9C0K0 894 aaPredicted RBP10.41□□□□□ -0.74
SYNE1-205ENST00000367251 KDM5AP29375 1690 aaKnown RBP10.41□□□□□ -0.74
SYNE1-205ENST00000367251 USHBP1Q8N6Y0 703 aa10.41□□□□□ -0.74
SYNE1-205ENST00000367251 TNNT1P13805 278 aa10.41□□□□□ -0.74
SYNE1-205ENST00000367251 NGLY1Q96IV0 654 aa10.41□□□□□ -0.74
SYNE1-205ENST00000367251 TSG101Q99816 390 aa10.41□□□□□ -0.74
SYNE1-205ENST00000367251 SEPT11Q9NVA2 429 aaKnown RBP10.41□□□□□ -0.74
SYNE1-205ENST00000367251 SPATA31E1Q6ZUB1 1445 aa10.41□□□□□ -0.74
SYNE1-205ENST00000367251 SSR1P43307 286 aaKnown RBP10.41□□□□□ -0.74
SYNE1-205ENST00000367251 CNNM3Q8NE01 707 aa10.41□□□□□ -0.74
SYNE1-205ENST00000367251 BEGAINQ9BUH8 593 aa10.41□□□□□ -0.74
SYNE1-205ENST00000367251 EDC4Q6P2E9 1401 aaKnown RBP10.41□□□□□ -0.74
SYNE1-205ENST00000367251 KIAA0754O94854 1291 aa10.41□□□□□ -0.74
SYNE1-205ENST00000367251 SLF2Q8IX21 1173 aa10.41□□□□□ -0.74
SYNE1-205ENST00000367251 SEC63Q9UGP8 760 aaKnown RBP10.41□□□□□ -0.74
SYNE1-205ENST00000367251 MAP3K5Q99683 1374 aa10.4□□□□□ -0.74
SYNE1-205ENST00000367251 USP5P45974 858 aa10.4□□□□□ -0.74
SYNE1-205ENST00000367251 SPA17Q15506 151 aa10.4□□□□□ -0.74
SYNE1-205ENST00000367251 TAF4BQ92750 862 aa10.4□□□□□ -0.74
SYNE1-205ENST00000367251 ZNF165P49910 485 aa10.4□□□□□ -0.74
SYNE1-205ENST00000367251 KCNG4Q8TDN1 519 aa10.4□□□□□ -0.74
SYNE1-205ENST00000367251 F13A1P00488 732 aa10.4□□□□□ -0.74
SYNE1-205ENST00000367251 XRCC6P12956 609 aaKnown RBP eCLIP10.4□□□□□ -0.74
SYNE1-205ENST00000367251 USP8P40818 1118 aa10.4□□□□□ -0.74
SYNE1-205ENST00000367251 TNIP1Q15025 636 aa10.4□□□□□ -0.74
SYNE1-205ENST00000367251 ATL3Q6DD88 541 aa10.4□□□□□ -0.74
SYNE1-205ENST00000367251 CATIPQ7Z7H3 387 aa10.4□□□□□ -0.74
SYNE1-205ENST00000367251 CCDC12Q8WUD4 166 aaPredicted RBP10.4□□□□□ -0.74
SYNE1-205ENST00000367251 TSPYL1Q9H0U9 437 aa10.4□□□□□ -0.74
SYNE1-205ENST00000367251 IARSP41252 1262 aaKnown RBP10.4□□□□□ -0.75
SYNE1-205ENST00000367251 XPCQ01831 940 aaPredicted RBP10.4□□□□□ -0.75
SYNE1-205ENST00000367251 CCDC178Q5BJE1 867 aa10.4□□□□□ -0.75
SYNE1-205ENST00000367251 KRT28Q7Z3Y7 464 aa10.4□□□□□ -0.75
SYNE1-205ENST00000367251 TMTC2Q8N394 836 aa10.4□□□□□ -0.75
SYNE1-205ENST00000367251 FAM200AQ8TCP9 573 aa10.4□□□□□ -0.75
SYNE1-205ENST00000367251 ANKRD24Q8TF21 1146 aa10.4□□□□□ -0.75
SYNE1-205ENST00000367251 BIN2Q9UBW5 565 aaPredicted RBP10.4□□□□□ -0.75
SYNE1-205ENST00000367251 ADAMTS2O95450 1211 aa10.39□□□□□ -0.75
SYNE1-205ENST00000367251 PLEKHM2Q8IWE5 1019 aa10.39□□□□□ -0.75
SYNE1-205ENST00000367251 IFIT3O14879 490 aaKnown RBP10.39□□□□□ -0.75
SYNE1-205ENST00000367251 PPP1R12BO60237 982 aaPredicted RBP10.39□□□□□ -0.75
SYNE1-205ENST00000367251 ZPR1O75312 459 aa10.39□□□□□ -0.75
SYNE1-205ENST00000367251 YEATS4O95619 227 aa10.39□□□□□ -0.75
SYNE1-205ENST00000367251 JAKMIP3Q5VZ66 844 aa10.39□□□□□ -0.75
SYNE1-205ENST00000367251 ANKRD13DQ6ZTN6 518 aa10.39□□□□□ -0.75
SYNE1-205ENST00000367251 RLBP1P12271 317 aa10.39□□□□□ -0.75
SYNE1-205ENST00000367251 FAM114A1Q8IWE2 563 aa10.39□□□□□ -0.75
SYNE1-205ENST00000367251 USP16Q9Y5T5 823 aa10.39□□□□□ -0.75
SYNE1-205ENST00000367251 PABPN1LA6NDY0 278 aaKnown RBP10.39□□□□□ -0.75
SYNE1-205ENST00000367251 MCMDC2Q4G0Z9 681 aa10.39□□□□□ -0.75
SYNE1-205ENST00000367251 CNNM2Q9H8M5 875 aa10.39□□□□□ -0.75
SYNE1-205ENST00000367251 KDM5DQ9BY66 1539 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms