RNA–Protein interactions for RNA: ENST00000366782.5

PSEN2-201, Transcript of presenilin 2, humanhuman

TSL 1 (best) BASIC

Gene PSEN2, Length 2,465 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN2-201ENST00000366782 SYAP1Q96A49 352 aaPredicted RBP17.35■□□□□ 0.37
PSEN2-201ENST00000366782 GPATCH3Q96I76 525 aa17.35■□□□□ 0.37
PSEN2-201ENST00000366782 BOLA2Q9H3K6 86 aa17.35■□□□□ 0.37
PSEN2-201ENST00000366782 TAF6LQ9Y6J9 622 aa17.35■□□□□ 0.37
PSEN2-201ENST00000366782 ZNF500O60304 480 aaPredicted RBP17.34■□□□□ 0.37
PSEN2-201ENST00000366782 ERBB3P21860 1342 aa17.34■□□□□ 0.37
PSEN2-201ENST00000366782 G3BP1Q13283 466 aaKnown RBP eCLIP17.34■□□□□ 0.37
PSEN2-201ENST00000366782 CREB3L3Q68CJ9 461 aa17.34■□□□□ 0.37
PSEN2-201ENST00000366782 NECAB1Q8N987 351 aa17.34■□□□□ 0.37
PSEN2-201ENST00000366782 MAP4K1Q92918 833 aa17.34■□□□□ 0.37
PSEN2-201ENST00000366782 TM6SF1Q9BZW5 370 aa17.34■□□□□ 0.37
PSEN2-201ENST00000366782 MTMR6Q9Y217 621 aa17.34■□□□□ 0.37
PSEN2-201ENST00000366782 ZKSCAN5Q9Y2L8 839 aa17.34■□□□□ 0.37
PSEN2-201ENST00000366782 A0A0D9SFI3 127 aa17.33■□□□□ 0.37
PSEN2-201ENST00000366782 JARID2Q92833 1246 aaPredicted RBP17.33■□□□□ 0.37
PSEN2-201ENST00000366782 CYP46A1Q9Y6A2 500 aa17.33■□□□□ 0.37
PSEN2-201ENST00000366782 KDM6AO15550 1401 aaPredicted RBP17.33■□□□□ 0.36
PSEN2-201ENST00000366782 NEURL1BA8MQ27 555 aa17.33■□□□□ 0.36
PSEN2-201ENST00000366782 RIC3Q7Z5B4 369 aa17.33■□□□□ 0.36
PSEN2-201ENST00000366782 TPCN1Q9ULQ1 816 aa17.33■□□□□ 0.36
PSEN2-201ENST00000366782 FIBPO43427 364 aa17.32■□□□□ 0.36
PSEN2-201ENST00000366782 DDX58O95786 925 aaKnown RBP17.32■□□□□ 0.36
PSEN2-201ENST00000366782 PIP4K2AP48426 406 aaPredicted RBP17.32■□□□□ 0.36
PSEN2-201ENST00000366782 NFATC2IPQ8NCF5 419 aa17.32■□□□□ 0.36
PSEN2-201ENST00000366782 DNM1Q05193 864 aaKnown RBP17.32■□□□□ 0.36
PSEN2-201ENST00000366782 XAGE3Q8WTP9 111 aa17.32■□□□□ 0.36
PSEN2-201ENST00000366782 SLC27A2O14975 620 aa17.31■□□□□ 0.36
PSEN2-201ENST00000366782 COPS6Q7L5N1 327 aa17.31■□□□□ 0.36
PSEN2-201ENST00000366782 EDC3Q96F86 508 aaKnown RBP17.31■□□□□ 0.36
PSEN2-201ENST00000366782 SLC52A2Q9HAB3 445 aa17.31■□□□□ 0.36
PSEN2-201ENST00000366782 SNRKQ9NRH2 765 aa17.31■□□□□ 0.36
PSEN2-201ENST00000366782 HDAC5Q9UQL6 1122 aa17.31■□□□□ 0.36
PSEN2-201ENST00000366782 NPHP4O75161 1426 aaPredicted RBP17.31■□□□□ 0.36
PSEN2-201ENST00000366782 UBE2HP62256 183 aa17.31■□□□□ 0.36
PSEN2-201ENST00000366782 GCKRQ14397 625 aa17.31■□□□□ 0.36
PSEN2-201ENST00000366782 CCDC183Q5T5S1 534 aa17.31■□□□□ 0.36
PSEN2-201ENST00000366782 LRP10Q7Z4F1 713 aa17.31■□□□□ 0.36
PSEN2-201ENST00000366782 TCEANC2Q96MN5 208 aa17.31■□□□□ 0.36
PSEN2-201ENST00000366782 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.3■□□□□ 0.36
PSEN2-201ENST00000366782 ZNF589Q86UQ0 364 aaPredicted RBP17.3■□□□□ 0.36
PSEN2-201ENST00000366782 ZNF496Q96IT1 587 aaPredicted RBP17.3■□□□□ 0.36
PSEN2-201ENST00000366782 MYD88Q99836 296 aa17.3■□□□□ 0.36
PSEN2-201ENST00000366782 PRDM4Q9UKN5 801 aa17.3■□□□□ 0.36
PSEN2-201ENST00000366782 NPHP3Q7Z494 1330 aa17.3■□□□□ 0.36
PSEN2-201ENST00000366782 SCN11AQ9UI33 1791 aa17.3■□□□□ 0.36
PSEN2-201ENST00000366782 PHF14O94880 888 aa17.3■□□□□ 0.36
PSEN2-201ENST00000366782 LARP1Q6PKG0 1096 aaKnown RBP17.3■□□□□ 0.36
PSEN2-201ENST00000366782 ZSCAN31Q96LW9 406 aaPredicted RBP17.3■□□□□ 0.36
PSEN2-201ENST00000366782 USP16Q9Y5T5 823 aa17.3■□□□□ 0.36
PSEN2-201ENST00000366782 ZKSCAN1P17029 563 aaPredicted RBP17.29■□□□□ 0.36
PSEN2-201ENST00000366782 DDX17Q92841 729 aaKnown RBP17.29■□□□□ 0.36
PSEN2-201ENST00000366782 SH2B1Q9NRF2 756 aaPredicted RBP17.29■□□□□ 0.36
PSEN2-201ENST00000366782 CCDC39Q9UFE4 941 aa17.29■□□□□ 0.36
PSEN2-201ENST00000366782 CHGBP05060 677 aa17.29■□□□□ 0.36
PSEN2-201ENST00000366782 PHKG2P15735 406 aa17.29■□□□□ 0.36
PSEN2-201ENST00000366782 TERF1P54274 439 aa17.29■□□□□ 0.36
PSEN2-201ENST00000366782 FSD1Q9BTV5 496 aa17.29■□□□□ 0.36
PSEN2-201ENST00000366782 METTL22Q9BUU2 404 aaPredicted RBP17.29■□□□□ 0.36
PSEN2-201ENST00000366782 R3HCC1Q9Y3T6 440 aaKnown RBP17.29■□□□□ 0.36
PSEN2-201ENST00000366782 LMTK3Q96Q04 1460 aa17.29■□□□□ 0.36
PSEN2-201ENST00000366782 KCNJ4P48050 445 aa17.28■□□□□ 0.36
PSEN2-201ENST00000366782 MPNDQ8N594 471 aa17.28■□□□□ 0.36
PSEN2-201ENST00000366782 NLRP2Q9NX02 1062 aa17.28■□□□□ 0.36
PSEN2-201ENST00000366782 NDUFB9Q9Y6M9 179 aa17.28■□□□□ 0.36
PSEN2-201ENST00000366782 MED23Q9ULK4 1368 aa17.28■□□□□ 0.36
PSEN2-201ENST00000366782 HCLS1P14317 486 aaPredicted RBP17.28■□□□□ 0.36
PSEN2-201ENST00000366782 COL15A1P39059 1388 aa17.28■□□□□ 0.36
PSEN2-201ENST00000366782 MEGF6O75095 1541 aa17.28■□□□□ 0.36
PSEN2-201ENST00000366782 C1orf167Q5SNV9 1468 aa17.27■□□□□ 0.36
PSEN2-201ENST00000366782 RFX5P48382 616 aaPredicted RBP17.27■□□□□ 0.36
PSEN2-201ENST00000366782 RAPGEF4Q8WZA2 1011 aa17.27■□□□□ 0.36
PSEN2-201ENST00000366782 MRC1P22897 1456 aa17.27■□□□□ 0.36
PSEN2-201ENST00000366782 VPS37CA5D8V6 355 aaPredicted RBP17.27■□□□□ 0.35
PSEN2-201ENST00000366782 HIP1O00291 1037 aa17.27■□□□□ 0.35
PSEN2-201ENST00000366782 GIMAP6Q6P9H5 292 aa17.27■□□□□ 0.35
PSEN2-201ENST00000366782 FUCA2Q9BTY2 467 aa17.27■□□□□ 0.35
PSEN2-201ENST00000366782 USP25Q9UHP3 1055 aa17.27■□□□□ 0.35
PSEN2-201ENST00000366782 NEXNQ0ZGT2 675 aa17.26■□□□□ 0.35
PSEN2-201ENST00000366782 FAM173BQ6P4H8 233 aa17.26■□□□□ 0.35
PSEN2-201ENST00000366782 DBNLQ9UJU6 430 aaKnown RBP17.26■□□□□ 0.35
PSEN2-201ENST00000366782 ATP6V1DQ9Y5K8 247 aa17.26■□□□□ 0.35
PSEN2-201ENST00000366782 MCM5P33992 734 aa17.26■□□□□ 0.35
PSEN2-201ENST00000366782 PTPN12Q05209 780 aaKnown RBP17.26■□□□□ 0.35
PSEN2-201ENST00000366782 TOB2Q14106 344 aaPredicted RBP17.26■□□□□ 0.35
PSEN2-201ENST00000366782 ANKRD13DQ6ZTN6 518 aa17.26■□□□□ 0.35
PSEN2-201ENST00000366782 CDC37L1Q7L3B6 337 aa17.26■□□□□ 0.35
PSEN2-201ENST00000366782 PROSER2Q86WR7 435 aaPredicted RBP17.26■□□□□ 0.35
PSEN2-201ENST00000366782 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.26■□□□□ 0.35
PSEN2-201ENST00000366782 ALS2Q96Q42 1657 aa17.25■□□□□ 0.35
PSEN2-201ENST00000366782 JCADQ9P266 1359 aa17.25■□□□□ 0.35
PSEN2-201ENST00000366782 TAF5LO75529 589 aa17.25■□□□□ 0.35
PSEN2-201ENST00000366782 TFCP2Q12800 502 aa17.25■□□□□ 0.35
PSEN2-201ENST00000366782 UVSSAQ2YD98 709 aa17.25■□□□□ 0.35
PSEN2-201ENST00000366782 COPRSQ9NQ92 184 aa17.25■□□□□ 0.35
PSEN2-201ENST00000366782 RPS6KB1P23443 525 aa17.24■□□□□ 0.35
PSEN2-201ENST00000366782 LARP1BQ659C4 914 aaKnown RBP17.24■□□□□ 0.35
PSEN2-201ENST00000366782 FERMT3Q86UX7 667 aa17.24■□□□□ 0.35
PSEN2-201ENST00000366782 FAM184AQ8NB25 1140 aa17.24■□□□□ 0.35
PSEN2-201ENST00000366782 ZNF830Q96NB3 372 aaPredicted RBP17.24■□□□□ 0.35
PSEN2-201ENST00000366782 CYP27B1O15528 508 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms