RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 LMNTD2Q8IXW0 634 aa12.65□□□□□ -0.38
CDC42BPA-205ENST00000366769 PPP1R14CQ8TAE6 165 aa12.65□□□□□ -0.38
CDC42BPA-205ENST00000366769 MCTP2Q6DN12 878 aa12.65□□□□□ -0.38
CDC42BPA-205ENST00000366769 AOPEPQ8N6M6 819 aa12.65□□□□□ -0.38
CDC42BPA-205ENST00000366769 FERMT2Q96AC1 680 aa12.65□□□□□ -0.38
CDC42BPA-205ENST00000366769 ALS2CR12Q96Q35 445 aa12.65□□□□□ -0.38
CDC42BPA-205ENST00000366769 PFDN1O60925 122 aa12.65□□□□□ -0.39
CDC42BPA-205ENST00000366769 STX6O43752 255 aa12.64□□□□□ -0.39
CDC42BPA-205ENST00000366769 FKBP15Q5T1M5 1219 aa12.64□□□□□ -0.39
CDC42BPA-205ENST00000366769 MPHOSPH8Q99549 860 aa12.64□□□□□ -0.39
CDC42BPA-205ENST00000366769 G3BP2Q9UN86 482 aaKnown RBP12.64□□□□□ -0.39
CDC42BPA-205ENST00000366769 NDUFAB1O14561 156 aa12.64□□□□□ -0.39
CDC42BPA-205ENST00000366769 SNCBQ16143 134 aa12.64□□□□□ -0.39
CDC42BPA-205ENST00000366769 HGSO14964 777 aaPredicted RBP12.64□□□□□ -0.39
CDC42BPA-205ENST00000366769 CCDC158Q5M9N0 1113 aa12.64□□□□□ -0.39
CDC42BPA-205ENST00000366769 CWC27Q6UX04 472 aaKnown RBP12.64□□□□□ -0.39
CDC42BPA-205ENST00000366769 CCDC50Q8IVM0 306 aa12.64□□□□□ -0.39
CDC42BPA-205ENST00000366769 GCC1Q96CN9 775 aa12.64□□□□□ -0.39
CDC42BPA-205ENST00000366769 TCHPQ9BT92 498 aa12.64□□□□□ -0.39
CDC42BPA-205ENST00000366769 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.64□□□□□ -0.39
CDC42BPA-205ENST00000366769 SSX2IPQ9Y2D8 614 aa12.64□□□□□ -0.39
CDC42BPA-205ENST00000366769 RANBP1P43487 201 aa12.64□□□□□ -0.39
CDC42BPA-205ENST00000366769 UBAC1Q9BSL1 405 aa12.64□□□□□ -0.39
CDC42BPA-205ENST00000366769 HIP1O00291 1037 aa12.64□□□□□ -0.39
CDC42BPA-205ENST00000366769 PPP1R12BO60237 982 aaPredicted RBP12.64□□□□□ -0.39
CDC42BPA-205ENST00000366769 TTLL12Q14166 644 aaPredicted RBP12.64□□□□□ -0.39
CDC42BPA-205ENST00000366769 FEZ2Q9UHY8 353 aaPredicted RBP12.64□□□□□ -0.39
CDC42BPA-205ENST00000366769 ABTB1Q969K4 478 aaPredicted RBP12.64□□□□□ -0.39
CDC42BPA-205ENST00000366769 ZNF500O60304 480 aaPredicted RBP12.63□□□□□ -0.39
CDC42BPA-205ENST00000366769 PPFIA3O75145 1194 aa12.63□□□□□ -0.39
CDC42BPA-205ENST00000366769 LZTFL1Q9NQ48 299 aa12.63□□□□□ -0.39
CDC42BPA-205ENST00000366769 CUX1P39880 1505 aa12.63□□□□□ -0.39
CDC42BPA-205ENST00000366769 EXOSC9Q06265 439 aaKnown RBP12.63□□□□□ -0.39
CDC42BPA-205ENST00000366769 IMMTQ16891 758 aaKnown RBP12.63□□□□□ -0.39
CDC42BPA-205ENST00000366769 TSNAXIP1Q2TAA8 658 aa12.63□□□□□ -0.39
CDC42BPA-205ENST00000366769 PPP4R3AQ6IN85 833 aa12.63□□□□□ -0.39
CDC42BPA-205ENST00000366769 GDAP1L1Q96MZ0 367 aa12.63□□□□□ -0.39
CDC42BPA-205ENST00000366769 SEC31AO94979 1220 aaKnown RBP12.63□□□□□ -0.39
CDC42BPA-205ENST00000366769 GBP1P32455 592 aa12.63□□□□□ -0.39
CDC42BPA-205ENST00000366769 ATP11AP98196 1134 aa12.63□□□□□ -0.39
CDC42BPA-205ENST00000366769 TCP11L2Q8N4U5 519 aa12.63□□□□□ -0.39
CDC42BPA-205ENST00000366769 GAS2L2Q8NHY3 880 aa12.63□□□□□ -0.39
CDC42BPA-205ENST00000366769 SCAND2PQ9GZW5 306 aaPredicted RBP12.63□□□□□ -0.39
CDC42BPA-205ENST00000366769 ZFYP08048 801 aaPredicted RBP12.63□□□□□ -0.39
CDC42BPA-205ENST00000366769 SESN3P58005 492 aa12.62□□□□□ -0.39
CDC42BPA-205ENST00000366769 CCDC57Q2TAC2 916 aa12.62□□□□□ -0.39
CDC42BPA-205ENST00000366769 CPLX4Q7Z7G2 160 aa12.62□□□□□ -0.39
CDC42BPA-205ENST00000366769 GOLGA6CA6NDK9 693 aa12.62□□□□□ -0.39
CDC42BPA-205ENST00000366769 GOLGA6DP0CG33 693 aa12.62□□□□□ -0.39
CDC42BPA-205ENST00000366769 PRPF40BQ6NWY9 871 aaKnown RBP12.62□□□□□ -0.39
CDC42BPA-205ENST00000366769 GOLGA6AQ9NYA3 693 aa12.62□□□□□ -0.39
CDC42BPA-205ENST00000366769 ODF2LQ9ULJ1 636 aa12.62□□□□□ -0.39
CDC42BPA-205ENST00000366769 MX1P20591 662 aa12.62□□□□□ -0.39
CDC42BPA-205ENST00000366769 TSHZ3Q63HK5 1081 aa12.62□□□□□ -0.39
CDC42BPA-205ENST00000366769 ZC3H6P61129 1189 aaKnown RBP12.62□□□□□ -0.39
CDC42BPA-205ENST00000366769 ECM2O94769 699 aaPredicted RBP12.62□□□□□ -0.39
CDC42BPA-205ENST00000366769 TNIP1Q15025 636 aa12.62□□□□□ -0.39
CDC42BPA-205ENST00000366769 CEP85LQ5SZL2 805 aa12.62□□□□□ -0.39
CDC42BPA-205ENST00000366769 RAB3IL1Q8TBN0 382 aa12.62□□□□□ -0.39
CDC42BPA-205ENST00000366769 PDE11AQ9HCR9 933 aa12.62□□□□□ -0.39
CDC42BPA-205ENST00000366769 TRMT1LQ7Z2T5 733 aaKnown RBP12.62□□□□□ -0.39
CDC42BPA-205ENST00000366769 FSD2A1L4K1 749 aa12.62□□□□□ -0.39
CDC42BPA-205ENST00000366769 GCOM1H8Y6P7 765 aaPredicted RBP12.62□□□□□ -0.39
CDC42BPA-205ENST00000366769 MYZAPP0CAP1 466 aa12.62□□□□□ -0.39
CDC42BPA-205ENST00000366769 PRPF4BQ13523 1007 aaKnown RBP12.62□□□□□ -0.39
CDC42BPA-205ENST00000366769 CACNA2D4Q7Z3S7 1137 aa12.61□□□□□ -0.39
CDC42BPA-205ENST00000366769 CTCFLQ8NI51 663 aaPredicted RBP12.61□□□□□ -0.39
CDC42BPA-205ENST00000366769 MYH6P13533 1939 aa12.61□□□□□ -0.39
CDC42BPA-205ENST00000366769 TTC19Q6DKK2 380 aaPredicted RBP12.61□□□□□ -0.39
CDC42BPA-205ENST00000366769 SH3BP5O60239 455 aa12.61□□□□□ -0.39
CDC42BPA-205ENST00000366769 GJB2P29033 226 aa12.61□□□□□ -0.39
CDC42BPA-205ENST00000366769 CCDC129Q6ZRS4 1044 aa12.61□□□□□ -0.39
CDC42BPA-205ENST00000366769 TSNARE1Q96NA8 513 aa12.61□□□□□ -0.39
CDC42BPA-205ENST00000366769 TFIP11Q9UBB9 837 aaKnown RBP12.61□□□□□ -0.39
CDC42BPA-205ENST00000366769 GNAI1P63096 354 aa12.61□□□□□ -0.39
CDC42BPA-205ENST00000366769 LONRF3Q496Y0 759 aa12.61□□□□□ -0.39
CDC42BPA-205ENST00000366769 ZNF354CQ86Y25 554 aa12.61□□□□□ -0.39
CDC42BPA-205ENST00000366769 DDX19AQ9NUU7 478 aaKnown RBP12.6□□□□□ -0.39
CDC42BPA-205ENST00000366769 SMIM24O75264 130 aa12.6□□□□□ -0.39
CDC42BPA-205ENST00000366769 E2F5Q15329 346 aa12.6□□□□□ -0.39
CDC42BPA-205ENST00000366769 ERCC6LQ2NKX8 1250 aa12.6□□□□□ -0.39
CDC42BPA-205ENST00000366769 GPRASP1Q5JY77 1395 aa12.6□□□□□ -0.39
CDC42BPA-205ENST00000366769 IFT81Q8WYA0 676 aa12.6□□□□□ -0.39
CDC42BPA-205ENST00000366769 SAMD15Q9P1V8 674 aa12.6□□□□□ -0.39
CDC42BPA-205ENST00000366769 CARMIL1Q5VZK9 1371 aa12.6□□□□□ -0.39
CDC42BPA-205ENST00000366769 ZGPATQ8N5A5 531 aaKnown RBP12.6□□□□□ -0.39
CDC42BPA-205ENST00000366769 ZNF215Q9UL58 517 aaPredicted RBP12.6□□□□□ -0.39
CDC42BPA-205ENST00000366769 NUTM2BA6NNL0 878 aaPredicted RBP12.6□□□□□ -0.39
CDC42BPA-205ENST00000366769 NUTM2EB1AL46 878 aaPredicted RBP12.6□□□□□ -0.39
CDC42BPA-205ENST00000366769 NUTM2AQ8IVF1 878 aaPredicted RBP12.6□□□□□ -0.39
CDC42BPA-205ENST00000366769 CCDC196A0A1B0GTZ2 297 aa12.6□□□□□ -0.39
CDC42BPA-205ENST00000366769 KIF3CO14782 793 aa12.59□□□□□ -0.39
CDC42BPA-205ENST00000366769 SEC63Q9UGP8 760 aaKnown RBP12.59□□□□□ -0.39
CDC42BPA-205ENST00000366769 PSMC4P43686 418 aa12.59□□□□□ -0.39
CDC42BPA-205ENST00000366769 MMS22LQ6ZRQ5 1243 aa12.59□□□□□ -0.39
CDC42BPA-205ENST00000366769 ZSCAN31Q96LW9 406 aaPredicted RBP12.59□□□□□ -0.39
CDC42BPA-205ENST00000366769 RLBP1P12271 317 aa12.59□□□□□ -0.39
CDC42BPA-205ENST00000366769 VPS36Q86VN1 386 aa12.59□□□□□ -0.39
CDC42BPA-205ENST00000366769 hCG_2014768A0A024R1R8 64 aa12.59□□□□□ -0.39
CDC42BPA-205ENST00000366769 FGD6Q6ZV73 1430 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms