RNA–Protein interactions for RNA: ENST00000366683.3

ACTA1-201, Transcript of actin, alpha 1, skeletal muscle, humanhuman

TSL 5 BASIC

Gene ACTA1, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1-201ENST00000366683 CALD1Q05682 793 aaKnown RBP20.43■□□□□ 0.86
ACTA1-201ENST00000366683 HSP90AB3PQ58FF7 597 aa20.43■□□□□ 0.86
ACTA1-201ENST00000366683 RPGRQ92834 1020 aaKnown RBP20.43■□□□□ 0.86
ACTA1-201ENST00000366683 UTP14AQ9BVJ6 771 aaKnown RBP20.43■□□□□ 0.86
ACTA1-201ENST00000366683 GNAI1P63096 354 aa20.42■□□□□ 0.86
ACTA1-201ENST00000366683 FKBP4Q02790 459 aaKnown RBP eCLIP20.42■□□□□ 0.86
ACTA1-201ENST00000366683 DUSP27Q5VZP5 1158 aa20.42■□□□□ 0.86
ACTA1-201ENST00000366683 OLFM4Q6UX06 510 aa20.42■□□□□ 0.86
ACTA1-201ENST00000366683 RTKN2Q8IZC4 609 aa20.42■□□□□ 0.86
ACTA1-201ENST00000366683 IFT57Q9NWB7 429 aa20.42■□□□□ 0.86
ACTA1-201ENST00000366683 DBF4Q9UBU7 674 aaPredicted RBP20.42■□□□□ 0.86
ACTA1-201ENST00000366683 RIC1Q4ADV7 1423 aa20.42■□□□□ 0.86
ACTA1-201ENST00000366683 ANKRD36CQ5JPF3 1778 aa20.41■□□□□ 0.86
ACTA1-201ENST00000366683 HOXA10P31260 410 aaPredicted RBP20.41■□□□□ 0.86
ACTA1-201ENST00000366683 NLRP3Q96P20 1036 aa20.41■□□□□ 0.86
ACTA1-201ENST00000366683 CEP350Q5VT06 3117 aa20.41■□□□□ 0.86
ACTA1-201ENST00000366683 APLP1P51693 650 aa20.4■□□□□ 0.86
ACTA1-201ENST00000366683 FSTL1Q12841 308 aa20.4■□□□□ 0.86
ACTA1-201ENST00000366683 TCIRG1Q13488 830 aa20.4■□□□□ 0.86
ACTA1-201ENST00000366683 SLC10A5Q5PT55 438 aa20.4■□□□□ 0.86
ACTA1-201ENST00000366683 RBM17Q96I25 401 aaKnown RBP20.4■□□□□ 0.86
ACTA1-201ENST00000366683 ANKRD13DQ6ZTN6 518 aa20.39■□□□□ 0.85
ACTA1-201ENST00000366683 NLRP10Q86W26 655 aa20.39■□□□□ 0.85
ACTA1-201ENST00000366683 CRAMP1Q96RY5 1269 aa20.39■□□□□ 0.85
ACTA1-201ENST00000366683 ZNF277Q9NRM2 450 aaPredicted RBP20.39■□□□□ 0.85
ACTA1-201ENST00000366683 HYPKQ9NX55 129 aa20.39■□□□□ 0.85
ACTA1-201ENST00000366683 ANP32CO43423 234 aa20.38■□□□□ 0.85
ACTA1-201ENST00000366683 C3orf67Q6ZVT6 689 aa20.38■□□□□ 0.85
ACTA1-201ENST00000366683 SYNE4Q8N205 404 aa20.38■□□□□ 0.85
ACTA1-201ENST00000366683 PLBD2Q8NHP8 589 aa20.38■□□□□ 0.85
ACTA1-201ENST00000366683 WDR90Q96KV7 1748 aa20.38■□□□□ 0.85
ACTA1-201ENST00000366683 RNF123Q5XPI4 1314 aa20.37■□□□□ 0.85
ACTA1-201ENST00000366683 POTECB2RU33 542 aa20.37■□□□□ 0.85
ACTA1-201ENST00000366683 ELL2O00472 640 aaPredicted RBP20.37■□□□□ 0.85
ACTA1-201ENST00000366683 DDNO94850 711 aaPredicted RBP20.37■□□□□ 0.85
ACTA1-201ENST00000366683 CC2D2BQ6DHV5 1058 aa20.37■□□□□ 0.85
ACTA1-201ENST00000366683 SMC1BQ8NDV3 1235 aa20.37■□□□□ 0.85
ACTA1-201ENST00000366683 TRMT112Q9UI30 125 aaKnown RBP20.37■□□□□ 0.85
ACTA1-201ENST00000366683 PSMD1Q99460 953 aa20.35■□□□□ 0.85
ACTA1-201ENST00000366683 MRS2Q9HD23 443 aa20.35■□□□□ 0.85
ACTA1-201ENST00000366683 TCERG1O14776 1098 aaKnown RBP20.34■□□□□ 0.85
ACTA1-201ENST00000366683 PPEF1O14829 653 aaPredicted RBP20.34■□□□□ 0.85
ACTA1-201ENST00000366683 HCLS1P14317 486 aaPredicted RBP20.34■□□□□ 0.85
ACTA1-201ENST00000366683 IARSP41252 1262 aaKnown RBP20.34■□□□□ 0.85
ACTA1-201ENST00000366683 GRIPAP1Q4V328 841 aa20.34■□□□□ 0.85
ACTA1-201ENST00000366683 C8orf58Q8NAV2 365 aa20.34■□□□□ 0.85
ACTA1-201ENST00000366683 SH3TC1Q8TE82 1336 aa20.33■□□□□ 0.85
ACTA1-201ENST00000366683 LAMB2P55268 1798 aa20.33■□□□□ 0.84
ACTA1-201ENST00000366683 ATP5J2-PTCD1G3V325 749 aa20.32■□□□□ 0.84
ACTA1-201ENST00000366683 CCDC27Q2M243 656 aa20.32■□□□□ 0.84
ACTA1-201ENST00000366683 ZNF428Q96B54 188 aa20.32■□□□□ 0.84
ACTA1-201ENST00000366683 ISCA1Q9BUE6 129 aa20.32■□□□□ 0.84
ACTA1-201ENST00000366683 TMX4Q9H1E5 349 aaPredicted RBP20.32■□□□□ 0.84
ACTA1-201ENST00000366683 SNED1Q8TER0 1413 aa20.32■□□□□ 0.84
ACTA1-201ENST00000366683 WWC1Q8IX03 1113 aa20.31■□□□□ 0.84
ACTA1-201ENST00000366683 JDP2Q8WYK2 163 aa20.31■□□□□ 0.84
ACTA1-201ENST00000366683 CHMP4AQ9BY43 222 aa20.31■□□□□ 0.84
ACTA1-201ENST00000366683 PHAXQ9H814 394 aaKnown RBP20.31■□□□□ 0.84
ACTA1-201ENST00000366683 ABCC4O15439 1325 aa20.3■□□□□ 0.84
ACTA1-201ENST00000366683 GOLGA2Q08379 1002 aa20.3■□□□□ 0.84
ACTA1-201ENST00000366683 RIC3Q7Z5B4 369 aa20.3■□□□□ 0.84
ACTA1-201ENST00000366683 ATP6V0A2Q9Y487 856 aa20.3■□□□□ 0.84
ACTA1-201ENST00000366683 ZNF541Q9H0D2 1346 aa20.29■□□□□ 0.84
ACTA1-201ENST00000366683 FZD9O00144 591 aa20.29■□□□□ 0.84
ACTA1-201ENST00000366683 BBOX1O75936 387 aa20.29■□□□□ 0.84
ACTA1-201ENST00000366683 CCDC30Q5VVM6 783 aa20.29■□□□□ 0.84
ACTA1-201ENST00000366683 DDX46Q7L014 1031 aaKnown RBP20.29■□□□□ 0.84
ACTA1-201ENST00000366683 SLC51AQ86UW1 340 aa20.29■□□□□ 0.84
ACTA1-201ENST00000366683 DNAJC5GQ8N7S2 189 aa20.29■□□□□ 0.84
ACTA1-201ENST00000366683 TSR2Q969E8 191 aaKnown RBP20.29■□□□□ 0.84
ACTA1-201ENST00000366683 FAM89AQ96GI7 184 aa20.29■□□□□ 0.84
ACTA1-201ENST00000366683 L3MBTL3Q96JM7 780 aaPredicted RBP20.29■□□□□ 0.84
ACTA1-201ENST00000366683 SCN4AP35499 1836 aa20.29■□□□□ 0.84
ACTA1-201ENST00000366683 TAF1P21675 1872 aa20.28■□□□□ 0.84
ACTA1-201ENST00000366683 IQCA1LA6NCM1 817 aa20.28■□□□□ 0.84
ACTA1-201ENST00000366683 HTRA3P83110 453 aa20.28■□□□□ 0.84
ACTA1-201ENST00000366683 TRIM28Q13263 835 aaKnown RBP20.28■□□□□ 0.84
ACTA1-201ENST00000366683 TSPYL6Q8N831 410 aa20.28■□□□□ 0.84
ACTA1-201ENST00000366683 NCBP3Q53F19 620 aaKnown RBP20.27■□□□□ 0.84
ACTA1-201ENST00000366683 SP8Q8IXZ3 490 aa20.27■□□□□ 0.84
ACTA1-201ENST00000366683 LARGE2Q8N3Y3 721 aa20.27■□□□□ 0.84
ACTA1-201ENST00000366683 DDX60Q8IY21 1712 aaKnown RBP20.27■□□□□ 0.83
ACTA1-201ENST00000366683 EIF6P56537 245 aaKnown RBP20.26■□□□□ 0.83
ACTA1-201ENST00000366683 GRAPQ13588 217 aa20.26■□□□□ 0.83
ACTA1-201ENST00000366683 RTL5Q5HYW3 569 aaPredicted RBP20.26■□□□□ 0.83
ACTA1-201ENST00000366683 GRAPLQ8TC17 118 aaPredicted RBP20.26■□□□□ 0.83
ACTA1-201ENST00000366683 CHADLQ6NUI6 762 aa20.25■□□□□ 0.83
ACTA1-201ENST00000366683 GPC2Q8N158 579 aa20.25■□□□□ 0.83
ACTA1-201ENST00000366683 MYD88Q99836 296 aa20.25■□□□□ 0.83
ACTA1-201ENST00000366683 TAF1DQ9H5J8 278 aaPredicted RBP20.25■□□□□ 0.83
ACTA1-201ENST00000366683 IL16Q14005 1332 aa20.25■□□□□ 0.83
ACTA1-201ENST00000366683 DDX58O95786 925 aaKnown RBP20.24■□□□□ 0.83
ACTA1-201ENST00000366683 POTEIP0CG38 1075 aa20.24■□□□□ 0.83
ACTA1-201ENST00000366683 POTEJP0CG39 1038 aa20.24■□□□□ 0.83
ACTA1-201ENST00000366683 MPNDQ8N594 471 aa20.24■□□□□ 0.83
ACTA1-201ENST00000366683 VPS33BQ9H267 617 aa20.24■□□□□ 0.83
ACTA1-201ENST00000366683 HACL1Q9UJ83 578 aa20.24■□□□□ 0.83
ACTA1-201ENST00000366683 SALL2Q9Y467 1007 aaPredicted RBP20.24■□□□□ 0.83
ACTA1-201ENST00000366683 COL4A5P29400 1685 aa20.23■□□□□ 0.83
ACTA1-201ENST00000366683 IRS4O14654 1257 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms